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1997 Fiscal Year Final Research Report Summary

A research on systematic analyzes of functions of novel genes discovered by genome project for drug development

Research Project

Project/Area Number 08672548
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biological pharmacy
Research InstitutionThe Institute of Physical and Chemical Research (RIKEN)

Principal Investigator

MURAKAMI Yasufumi  RIKEN,Cellular Physiology Laboratory, Senior Scientist, 細胞生理学研究室, 先任研究員 (90200279)

Co-Investigator(Kenkyū-buntansha) EKI Toshihiko  RIKEN,Cellular Physiology Laboratory, Senior Scientist, 細胞生理学研究室, 先任研究員 (40192512)
Project Period (FY) 1996 – 1997
Keywordsbudding yeast / genomics / gene function / receptor / gene disruption / proteome analysis
Research Abstract

A basis for drug discovery using model organism has been developed. To determine a function of novel gene discovered by genomic research, various approaches have been applied. We chose yeast as a key model organism and we developed a method to analyze function of novel genes in a systematic way.
The genome of Saccharomyces cerevisiae was completely determined in 1996 and this project resulted with identification of 6000 genes and 4000 genes among them were novel genes. As a part of this international collaborative project, we have completely determined the sequence of chromosome VI and we identified 126 genes. We chose these genes as a model for a systematic analysis of gene function for drug diacovery, and we have established following strategies ;
(1) an efficient method for disrupting gene of yeast. By this method we can easily obtain gene-knockout clones with a efficiency of more than 30% and this is a big improvement in the order of magnitude.
(2) development of method for characterization of genes which share homologies with genes which are presumably important for drug discovery. This development includes application of the microphysiometer for analysis of yeast gene function.
(3) Development of methods for determining expression profiles of yeast genes.
(4) Development of method to express genes in various organism and method to purify gene products using affinity beads.

  • Research Products

    (22 results)

All Other

All Publications (22 results)

  • [Publications] Eki, T.: "“Cloning and characterization of novel gene,DCRR1,expressed from Down's syndrome critical region of human chromosome 21q22.2"" DNA Sequence. 7. 153-164 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ohira, M.: "“Gene identification in 1.6-Mb region of the Down syndrome region on chromosome 21"" Genome Res.7. 47-58 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Naitou, M.: "“Expression profiles oh transcripts from 126 ORFs in Saccharomyces cerevisiae chromosome Vl by systematic Northern snslyse"" Yeast. 13. 1275-1290 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ishiai, M.: "“Isolation of human and fission yeast gene homologues of the budding yeast origin recognition complex subunit Orc5:Human homologue(ORC5L)maps to chromosome band 7q22"" Genomics. 46. 294-298 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakamoto, A.: "“Both hypertrophic and dilated cardiomyopathies are caused by mutation of the same gene delta-sarcoglycan,in hamster.An animal model of disrupted dystrophin-associated glycoprotein complex"" Proc.Natl.Acad.Sci.USA. 94. 13873-13878 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Eki, T.: "“Mapping of the human genes encoding cyclin H(CCNH)and the CDK-activating kinase(CAK)assembly factor MAT1(MNAT1)to chromosome bands 5q13.3-q14 and 14q23,respectively,"" Genomics. in press.

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Toshihiko Eki, et al: "Analysis of a 36.2-kb DNA sequence including the right telomere of chromosome VI from Saccharomyces cerevisiae." Yeast. 12. 149-167 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Toshihiko Eki, et al.: "Fifteen Open Readig Frames in a 30.8-kb Region of the Right Arme of Chromosome VI from Saccharomyces cerevisiae." Yeast. 12. 177-190 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hiroko Hagiwara, et al: "Identification of the coding region of Saccharomyces cerevisiae chromosome VI using the computer program GenMark" DNA Research. 2. 247-253 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Eki, T et al.: "A long-range physical map of the human chromosome 21q22.1 band from the YAC continuum." Mammalian Genome. 7. 303-311 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A.Goffeau, et al.: "Life with 6000 Genes" Science. 274. 546-567 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Murakami, et al.: "SYSTEMATIC ANALYSIS OF NOVEL GENES OF THE Saccharomyces cerevisiae chromosome VI" Microbial and Comparative Genomics. 3. 244 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T.Eki, et al.: "Mapping of the human homolog (ORC1L) of the yeast origin recognition complex subunit 1 gene to chromosome band 1p32" Genomics. 36. 559-561 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Shibata, et al.: "Inactive Allele-Specific Methylation and Chromatin Structure of the lmprinted Gene U2af1-rs1 on Mouse Chromosome 11" Genomics. 35. 248-252 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Eki, T.: ""Cloning and characterization of novel gene, DCRR1, expressed from Down's syndrome critical region of human chromosome 21q22.2"" DNA Sequence. 7. 153-164 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ohira, M.: ""Gene identification in 1.6-Mb region of the Down syndrome region on chromosome 21"" Genome Res.7. 47-58 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Naitou, M.: ""Expression profiles of transcripts from 126 ORFs in Saccharomyces cerevisiae chromosome VI by systematic Northern analyze"" Yeast. (in press). (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ishiai, M.: ""Isolation of human and fission yeast gene homologues of the budding yeast origin recognition complex subunit Orc5 : Human homologue (ORC5L) maps to chromosome band 7q22"" Genomics. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Eki, T.: ""Mapping of the human genes encoding cyclin H (CCNH) and the CDK-activating kinase (CAK) assembly factor MAT1 (MNAT1) to chromosome bands 5q13.3-q14 and 14q23, respectively"" Genomics. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Goffeau, A., et al.: ""Yeast Genome Directory"" Nature Supplement to Vol387,29 May. (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Sakamoto, A.: ""Both hypertrophic and dilated cardiomyopathies are caused by mutation of the same gene, delta-sarcoglycan, in hamster : An animalmodel of disrupted dystrophin-associated glycoprotein complex"" Proc.Natl.Acad.Sci.USA. 94. 13873-13878 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nakazato, A.: ""Comparison of the structural characteristics of chromosome VI in Saccharomyces sensu stricto : The divergence, species-dependent features and uniqueness of Sake yeast"" Yeast. (in press). (1998)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1999-03-16  

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