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1999 Fiscal Year Final Research Report Summary

Transcriptional Regulation in Yeast Genomic Chromatin

Research Project

Project/Area Number 09044235
Research Category

Grant-in-Aid for Scientific Research (C).

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionMeisei University (1998-1999)
Tokyo University of Pharmacy and Life Science (1997)

Principal Investigator

SHIMIZU Mitsuhiro  Meisei University, Faculty of Physical Sciences and Engineering, Associate Professor, 理工学部, 助教授 (80231364)

Project Period (FY) 1997 – 1999
Keywordschromatin / nucleosome / histone deacetylation / protein-DNA interaction / transcription / repressor / budding yeast / meiosis
Research Abstract

The purpose of this project is to elucidate mechanisms of transcriptional regulation through chromatin alteration in early meiotic genes in yeast Saccharomyces cerevisiae. The process of entering meiosis in S. cerevisiae is regulated by both environmental signals and a cascade of regulatory genes. The IME1 and IME2 (Inducer of meiosis) gene products play a pivotal role in the decision to initiate meiosis. Rme1p represses IME1 in haploid cells, which are unable to enter meiosis, whereas Ume6p complexed with histone deacetylase Rpd3p represses IME2 in vegetative cells. In this study, we examined mechanisms of repression by Rme1p and Ume6p-Rpd3p in vivo. We demonstrated that Rme1p acts at a distance to prevent activators from binding to their target sites to exert repression in vivo, and proposed that Rme1p may establish a localized repressive chromatin domain. On the other hand, it was shown that activators is present their target sites in promoters repressed by Ume6p-Rpd3p. These results can not be explained by a model proposed widely that histone acetylation-deacetylation modulates the nucleosome structure to regulate trans-acting factor binding. Furthermore, we found that an artificial recruitment of TBP (TATA box binding protein) bypasses repression by Ume6p-Rpd3p, suggesting that histone deacetylarion inhibits TBP binding and/or recruitment of RNA polymerase II holoenzyme. In summery, we proposed novel mechanisms for repression by Rme1p and Ume6p-Rpd3p in relation to chromatin. These findings may be relevant for all eukaryotic cells, since transcription factors studied here are evolutionarily conserved.

  • Research Products

    (10 results)

All Other

All Publications (10 results)

  • [Publications] Mitsuhiro Shimizu: "Transcriptional repression at a distance through exclusion of activator binding in vivo"Proc. Natl. Acad. Sci. U.S.A.. 94. 790-795 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mitsuhiro Shimizu: "Dissection of the DNA binding domain of yeast Zn-finger protein Rmelp, a repressor of meiotic activator IMEl"Nucleic Acids Symp. Ser.. 37. 175-176 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mitsuhiro Shimizu: "Genomic footprinting of the yeast zinc-finger protein Rmelp and its roles in repression of the meiotic activator IMEl"Nucleic Acids Res.. 26. 2329-2336 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mitsuhiro Shimizu: "A role of the C-terminal region adjacent to the zinc-fingers in the DNA binding ability of Rmelp, a regulator of meiosis in S. cerevisiae"Nucleic Acids Symp. Ser.. 42. 201-202 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 清水弘光: "転写制御におけるクロマチン構造変化のメカニズム"生物物理. 39. 376-380 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mitsuhiro Shimizu, Weishi Li, Heisaburo Shindo and Aaron P. Mitchell: "Transcriptional repression at a distance through exclusion of activator binding in vivo"Proc. Natl. Acad. Sci. U.S.A.. 94. 790-795 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Mitsuhiro Shimizu, Masae Hara, Atsushi Murase, Heisaburo Shindo, and Aaron P. Mitchell: "Dissection of the DNA binding domain of yeast Zn-finger protein Rme1p, a repressor of meiotic activator IME1"Nucleic Acids Symp. Ser.. 37. 175-176 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Mitsuhiro Shimizu, Weisih Li, Peter A. Covitz, Masae Hara, Heisaburo Shindo and Aaron P. Mitchell: "Genomic footprinting of the yeast zinc-finger protein Rme1p and its roles in repression of the meiotic activator IME1"Nucleic Acids Res.. 26. 2329-2336 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Mitsuhiro Shimizu, Atsushi Murase, Heisaburo Shindo and Aaron P. Mitchell: "A role of the C-terminal region adjacent to the zinc-fingers in the DNA binding ability of Rme1p, a regulator of meiosis in S. cerevisiae"Nucleic Acids Symp. Ser.. 42. 201-202 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Mitsuhiro Shimizu: "Mechanisms of chromatin alteration in transcriptional regulation"Biophysics. 39,(in Japanese). 376-380 (1999)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2001-10-23  

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