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2001 Fiscal Year Final Research Report Summary

Molecular basis of RNA function

Research Project

Project/Area Number 09278102
Research Category

Grant-in-Aid for Scientific Research on Priority Areas (A)

Allocation TypeSingle-year Grants
Research InstitutionThe University of Tokyo

Principal Investigator

NAKAMURA Yoshikazu  Institute of Medical Science, The University of Tokyo, Professor, 医科学研究所, 教授 (40114590)

Co-Investigator(Kenkyū-buntansha) MATSUFUJI Senya  The Jikei University, Faculty of Medicine, Professor, 医学部, 教授 (50192753)
KUCHINO Yoshiyuki  National Cancer Center, Biophysics Division, Chief(Researcher), 部長(研究職) (60124418)
AIBA Hiroji  Nagoya University, Graduate School of Science, Professor, 大学院・理学研究科, 教授 (20025662)
YOKOYAMA Shigeyuki  Graduate School of Science, Faculty of Science, The University of Tokyo, Professor, 大学院・理学系研究科, 教授 (00159229)
INOUE Kunio  Nara Institute of Science and Technology, Research Associate, 助手 (40252415)
Project Period (FY) 1997 – 2000
KeywordsRNA / translational control / posttranscriptional control / ribosome / molecular mimicry / stop codon / life of mRNA / RNA-binding protein
Research Abstract

RNA plays a fundamental key role in life as a variety of regulatory and catalytic molecules involved in gene expression and cellular regulation. Here, we have studies molecular bases of dynamic RNA functions by focusing on RNA-protein complexes, regulatory RNAs for gene expression, splicing, transport and translation. The remarkable progress in functional and structural biology of translational apparatus has uncovered a novel biological phenomenon of macromolecular mimicry between protein and tRNA. The 3D struetures of translational elongation factor EF-G and ribosome recycling factor RRF are shown to mimic a tRNA shape. Another, even more sophisticated, example may be polypeptide release factors that are shown to possess a tripeptide 'anticodon' to decipher stop codons in mRNA, showing an impressive mimic of tRNA function. It is surprising that it took 4 decades since the discovery of the genetic code to figure out the basic mechanisms behind the deciphering of its 64 codons. Other achievements in the translational control - such as mammalian frameshift control, trans-translation with tmRNA in bacteria, and cell proliferation induced by the abnormality in the mammalian translation initiation factors - as well as in mRNA export, RNA-binding proteins involved in cell differentiation and RNA-protein complex structures, have uncovered numerous novel mechanisms of gene expression and RNA functions. These accomplishments clearly emphasized the biological importance and interest of the regulatory role of RNA and the mechanisms underlying the post-transcriptional control of gene expression. Certainly, understanding of RNA information flow has increasing importance in the post-genome era. A future emerging understanding of spatiotemporal networking of diverse functional RNAs Will greatly facilitate post-genome research as well as structural biology, while expanding our knowledge of how deeply and universally RNA constitutes life.

  • Research Products

    (10 results)

All Other

All Publications (10 results)

  • [Publications] Ito, K.: "A tripeptide 'anticodon' deciphers stop codons in messenger RNA"Nature. 403. 680-684 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nakamura, Y.: "Mimicry grasps reality in translation termination"Cell. 101. 349-352 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Wilson, K.: "Functional sites of interaction between release factor RF1 and the ribosome"Nature Struct.Biol.. 7. 866-870 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Toyoda, T.: "Crystal structure combined with genetic analysis of the Thermus thermophilus ribosome recycling factor shows that a flexible hinge may act as a functional switch"RNA. 6. 1432-1444 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Abo, T.: "SsrA-mediated tagging and proteolysis of LacI and its role in the regulation of lac operon"EMBO J.. 19. 3762-3769 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ito, K.: "A tripeptide 'anticodon' deciphers stop codons in messenger RNA."Nature. 403. 680-684 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nakamura, Y.: "Mimicry grasps reality in translation termination."Cell. 101. 349-352 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Wilson, K.: "Functional sites of interaction between release factor RF1 and the ribosome."Nature Struct. Biol.. 7. 866-870 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Toyoda, T.: "Crystal structure combined with genetic analysis of the Thermus thermophilus ribosome recycling factor shows that a flexible hinge may act as a functional switch."RNA. 6. 1432-1444 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Abo, T.: "SsrA-mediated tagging and proteolysis of LacI and its role in the regulation of lac operon."EMBO J.. 19. 3762-3769 (2000)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2003-09-17  

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