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2000 Fiscal Year Final Research Report Summary

Studies on photosynthetic mechanism of bacteria having Zn-bacteriochlorophyll

Research Project

Project/Area Number 09309008
Research Category

Grant-in-Aid for Scientific Research (A).

Allocation TypeSingle-year Grants
Section一般
Research Field 広領域
Research InstitutionTokyo Metropolitan University

Principal Investigator

SHIMADA Keizo  Tokyo Metropolitan Univ., Dept. Biol., Professor, 理学研究科, 教授 (80112473)

Co-Investigator(Kenkyū-buntansha) HIRAISHI Akira  Toyohashi Univ., Technol., Dept. Ecol Engneering, Professor, エコロジー工学系, 教授 (40283486)
TAKAMIYA Ken-ichiro  Tokyo Inst. Technol., Dept. Biological Science, Professor, 生命理工学研究科, 教授 (80037259)
ITOH Sigeru  Univ. Nagoya, Dept. Phys., Professor, 理学研究科, 教授 (40108634)
WAKAO Norio  Iwate Univ., Dept. Biosci. Technol., Prorfessor, 農学部, 教授 (30003784)
MIMURO Mamoru  Yamaguchi Univ., Dept. Physics, Biol. Informatics, Professor, 理学部, 教授 (40142004)
Project Period (FY) 1997 – 2000
KeywordsBactriochlorophyll / Zinc / Photosynthetic bacteria / Acidophile / Reaction center / Acidiphilium
Research Abstract

Major results obtained during the term of this project are summarized as follows :
1. Reaction center (RC) and the sole antenna complex, LH 1, were isolated from Acidiphilium (A.) rubrum, a representative species in the Zn-bacteriochlorophyll (Zn-BChl) a producing bacteria. The RC preparation contained Zn-BChl a, bacteriopheophytin and spirilloxanthin in a ratio of 4 : 2 : 1 but no Mg-BChl a, indicating that Zn-BChl a is functioning as the special pair and the accessary BChl.
2. Genes for the RC and the LH proteins were found to form a cluster similar to the puf-operon of purple photosynthetic bacteria. Amino acid residues for cofactor binding in the purple bacterial RC were all conserved but the L168His residue which is hydrogen bonded to a side chain of one of the special pair BChl. The L168 residue was Glu in A.rubrum. A weaker interaction between the special pair BChls than that in purple bacterial RC was suggested by analysis of absorption and CD spectra which was in good agreement … More with the substitution of L168His to Glu residue.
3. Genes for proteins functioning in metal chelation in the BChl biosynthetic pathway were cloned, and the products were shown to have Mg-chelating activity by functional complimentation. The temporary incorporation of Mg atom into precursors of BChl biosynthesis was confirmed by the detection of Mg-protoporphylin IX monomethylester in A.rubrum cells. Thus, Mg in the protoporphyri ring was shown to be substituted by Zn atom at the later step (s) in the BChl biosynthesis pathway.
4. The ratio of Zn-BChl a to Mg-BChl a was around 13 : 2 under pH lower than 4, but was decreased at higher pH.The cellular BChl content was increased under starved conditions. Zn^<2+> concentration of μM order was enough for Zn-BChl formation ; Higher concentration did not enhance Zn-BChl production.
5. Zn-BChl was found only from species belonging to genus Acidiphilium. An acidophilic BChl-containing bacteria, Acidisphaera rubrifaciens found by this project could synthesize trace amount of Zn-BChl a in addition to Mg-BChl a when mM order of Zn^<2+> was provided.
6. Zn-BChl a was shown to be stable under pH conditions higher than 1 , whitle Mg was released from Mg-BChl a below pH 4. The acid-resistence of Zn-BChl a was in good agreement with the extremely acidophilic nature of Acidiphilium. Less

  • Research Products

    (19 results)

All Other

All Publications (19 results)

  • [Publications] 永島賢治 ほか: "Nucleotide sequences of genes coding for photosynthetic reaction centers and light-harvesting proteins of Acidiphilium rubrum and related aerobic acidophilic bacteria."Plant & Cell Physiology. 38. 1249-1258 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 伊藤繁 ほか: "Accumulation of Fe, Cr and Ni metals inside cells of acidophilic bacterium, Acidiphilium rubrum, that produced Zn containing bacteriochlorophyll α."Plant & Cell Physiology. 39. 740-744 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 小林正美 ほか: "Acid resistance of Zn-bacteriochlorophyll a from an Acidophillic bacterium, Acidiphilium rubrum."Analitical Sciences. 14. 1149-1152 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 増田建 ほか: "Magnesium insertion by magnesium chelatase in the biosynthesis of zinc bacteriochlorophyll α in an aerobic acidophilic bacterium Acidiphilium rubrum."Journal of Biological Chemistry. 274. 33594-33600 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 三室守 ほか: "Magnetic circular dichroism (MCD) properties of reaction center complexes isolated from the Zn-Bacteriochlorophyll a containing purple bacterium, Acidiphilium rubrum."Biochemistry. 39. 4020-4027 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 平石明 ほか: International Journal of Systematic and Evolutionary Microbiology. 50. 1539-1546 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nagashima, K.V.P.et al.: "Nucleotide sequences of genes coding for photosynthetic reaction centers and light-harvesting proteins of Acidiphilium rubrum and related aerobic acidophilic bacteria."Plant & Cell Physiology. vol.38. 1249-1258 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Itoh, S.et al.: "Accumulation of Fe, Cr and Ni metals inside cells of acidophilic bacterium, Acidiphilium rubrum, that produced Zn containing bacteriochlorophyll a."Plant & Cell Physiology. vol.39. 740-744 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hiraishi, A.et al.: "Phylogeny and photosynthetic features of Thiobacillus acidophilus and related acidophilic bacteria : its transfer to the genus Acidiphilium as Acidiphilium acidophilum comb. nov."International Journal of Systematic Bacteriology. vol.64. 1389-1398 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kobayashi M.et al.: "Acid resistance of Zn-bacteriochlorophyll a from an Acidophillic bacterium Acidiphilium rubrum."Analytical Sciences. vol.14. 1149-1152 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kobayashi, M.et al.: "Structural determination of the novel Zn-containing bacteriochlorophyll in Acidiphilium rubrum."Photomedicine and Photobiology. vol.20. 75-80 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Akiyama, M.et al.: "Pigment composition of the reaction center complex isolated from an acidophilic bacterium Acidiphilium rubrum grown at pH 3.5."Photomedicine and Photobiology. vol.20. 85-87 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Takaichi, S.et al.: "Nomenclature of metal-substituted (bacteria) chlorophylls in natural photosynthesis : Metal-(bacterio) chlorophyll and M-(B) Chl."Photosynthesis Research. vol.59. 255-256 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Masuda, T.et al.: "Magnesium insertion by magnesium chelatase in the biosynthesis of zinc bacteriochlorophyll a in an aerobic acidophilic bacterium Acidiphilium rubrum."Journal of Biological Chemistry. vol.274. 33594-33600 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kobayashi, M.: "Comparison of physicochemical properties of metallobacteriochlorophylls and metallochlorophylls."Zeitschrift fur Physikalishce Chemie. vol.213. 207-214 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Akiyama, M.et al.: "Accumulation of poly-β-hydroxybutyrate in an acidophilic photosyntheti purple bacterium Acidiphilium rubrum."Photomedicine and Photobiology. vol.21. 101-104 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Mimuro, M.et al.: "Magnetic cwrcular dichroism (MCD) properties of reaction center complexes isolated from the Zn-Bacteriochlorophyll a containing purple bacterium, Acidiphilium rubrum."Biochemistry. vol.39. 4020-4027 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Matsuzawa, Y.et al.: "Ultrastructure of the acidophilic aerobic photosynthetic bacterium Acidiphilium rubrum."Current Microbiology. vol.40. 398-401 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hiraishi, A.: "Acidisphaera rubrifaciens gen. nov., sp. nov., an aerobic photosynthetic bacterium isolated from acidic environments."International Journal of Systematic and Evolutionary Microbiology. vol.50. 1539-1546 (2000)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2002-03-26  

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