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1999 Fiscal Year Final Research Report Summary

MOLECULAR MECHANISM OF ASSEMBLY OF SINGLE MEMBRANE-BOUND ORGANELLS AND "SORTING ENGINEERING"

Research Project

Project/Area Number 09460156
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied molecular and cellular biology
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

SAKAI Yasuyoshi  Kyoto University, Graduate School of Agriculture, Associate Professor, 農学研究科, 助教授 (60202082)

Co-Investigator(Kenkyū-buntansha) MURATA Masayuki  National Institute for Physiological Sciences, Department of Molecular Physiology, Associate Professor, 生理学研究所, 助教授 (50212254)
YURIMOTO Hiroya  Kyoto University, Graduate School of Agriculture, Assistant Professor, 農学研究科, 助手 (00283648)
KATO Nobuo  Kyoto University, Graduate School of Agriculture, Professor, 農学研究科, 教授 (50026556)
Project Period (FY) 1997 – 1999
KeywordsMethylotrophic yeasts / Biotraffic engineering / Candida boidinii / Peroxisomes / Heterologous gene expression / Protein traffic / Autophagy / Oxidases
Research Abstract

The methylotrophic yeast is widely used as a heterologous gene expression system in academic and applied fields. When cells are grown on methanol, a large volume of cells (up to 80%) was occupied by a single-membrane bound organelle, the peroxisome. The study was conducted to produce toxic oxidases within peroxisomes of the methylotrophic yeast, since many oxidases are useful for clinical diagnosis. To this end, the protein traffic was manipulated for efficient protein transport, and this strategy (or concept) was named "sorting engineering" (later biotraffic engineering). Since genetic diorders deficient in peroxisome assembly are known, the molecular mechanism for protein traffic to peroxisomes was in important in medical field and investigated using the methylotrophic yeast as a model organism. In this study, the information obtained from the basic research was applied to production of fungal fructosyl amino acid oxidase, which is useful for determination of glycated proteins. In diabetic patients, the level of glycated proteins is high. Using (i) an efficient targeting signal to peroxisomes and (ii) an alcohol-oxidase depleted strain, and (iii) optimizing codon usage and culture conditions, we could improve the enzyme productivity approximately 47-fold from the orginal transformant. The produced protein accumulated within membrane-bound peroxisomes up to nearly 20% of the toal soluble protein. This is the first successful example which was conducted based on the concept "sorting engineering" ("biotraffic engineering"), and a similar approach will be possible in any other eukaryotic cells for heterologous gene expression, especially for the production of toxic or membrane proteins.

  • Research Products

    (46 results)

All Other

All Publications (46 results)

  • [Publications] Sakai,Y.: "Purification and Properties of Methyl Formate Synthase, a Mitochondrial Alcohol Dehydrogenase, Participating in Formaldehyde Oxidation in Methylotrophic Yeasts"Apple.Environ.Microbiol.. 63(5). 1715-1720 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Ester Synthesis by NAD+-Dependent Dehydrogenation of Hemiacetal : Production of Methylformate by Cells of Methylotrophic Yeasts"Biosci.Biotech.Biochem.. 61(8). 1391-1393 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Regulation of the Formate Dehydrogenase Gene, FDH1, in the Methylotrophic Yeast Candida boidinii and Growth characteristics of an FDH1-Disrupted Strain on Methanol, Methylamine, and Choline"J.Bacteriol.. 179(14). 4480-4485 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Green fluorescent protein (GFP) fluorescence through the Rhodamine channel after excitation"Technical Tips Online. TO. 1319 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 阪井康能: "ペルオキシソームはどのようにしてできるのか-酵母ペルオキシンとペルオキシソーム膜タンパク-"化学と生物. 35(10). 687-695 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Peroxisome degradation by microautophagy in Pichia pastoris : Identification of specific steps and morphological intermediates"J.Cell Biol.. 141(3). 625-636 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Regulation of peroxisomal proteins and organelle proliferation by multiple carbon sources in the methylotrophic yeast, Candida boidinii"Yeast. 14. 1175-1187 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Hemiacetal dehydrogenation activity of alcohol dehydrogenases in Saccharomyces cerevisiae"Biosci.Biotech.Biochem.. 62(10). 1956-1961 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Regulation and the physiological role of the DAS1 gene encoding dihydroxyacetone synthase in the methyltrophic yeast Candida boidinii"J.Bacteriol.. 188(22). 5885-5890 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 阪井康能: "ペルオキシソームを食べる液胞を生きたままで見る -目で見るバイオ-"バイオサイエンスとバイオインダストリー. 56(10). 657-658 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 阪井康能: "オルガネラ間トポロジーのダイナミズム:ペルオキシソーム・ミクロオートファジー"バイオサイエンスとバイオインダストリー. 56(10). 683-684 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 阪井康能: "メタノール資化性酵母における細胞機能制御の分子機構と応用開発に関する研究"日本農芸化学会誌. 72(11). 1333-1344 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 阪井康能: "メタノール資化性酵母における細胞機能制御の分子機構と応用開発に関する研究"日本農芸化学会誌. 72. 405-407 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Subcellular localization of fructosyl amino acid oxidases in peroxisomes of Aspergillus terreus and Penicillium janthinellum"J.Biosci.Bioeng.. 87(1). 108-111 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "A Novel Hemiacetal Dehydrogenase Activity Involved in Ethyl Acetate Synthesis In Candida utilis"J.Biosci.Bioeng.. 87(5). 690-692 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Alcohol Oxidase Hybrid Oligomers Formed In vivo and In vitro"Yeast. 15(12). 1223-1230 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Production of fungal fructosyl amino acid Oxidase useful for diabetic diagnosis in the peroxisome of Candida boidinii"FEBS Lett.. 459(2). 233-237 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Biotechnological application of cellular functions of the methylotrophic yeast"J.Mol.Catalysis B : Enzymatic. 6(3-6). 77-89 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Peroxisomal Membrane Protein Pmp47 Is Essential in the Metabolism of Middle Chain Fatty Acid in Yeast Peroxisomes and Is Associated with Peroxisome Proliferation"J.Biol.Chem.. 275(5). 3455-3461 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Environmental response of yeast peroxisomes : organelle assembly and degradation"Cell Biochem.Biophys.. (in press). (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 由里本博也: "メタノール資化性酵母による異種遺伝子発現"化学と生物. 38(5)(印刷中). (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 阪井康能: "糖尿病診断に有効な微生物由来のフルクトシルアミノ酸オキシダーゼ-酵素の性質とメタノール酵母を用いる大量生産-"日本臨床化学会 九州支部会誌. (印刷中). (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakai,Y.: "Trends in Protein Research"Polish Academy of Sciences, Japan Society for Promotion of Science. 148 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y. Sakai: "Purification and Properties of Methyl Formate Synthase, a Mitochondrial Alcohol Dehydrogenase, Participating in Formaldehyde Oxidation in Methylotrophic Yeasts."Appl. Environ. Microbiol. 63 (5). 1715-1720 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Ester Synthesis by NADィイD1+ィエD1-Dependent Dehydrogenation of Hemiacetal : Production of Methylformate by Cells of Methylotrophic Yeasts."Biosci. Biotech. Biochem.. 61 (8). 1391-1393 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Green fluorescent protein (GFP) fluorescence through the Rhodamine channel after excitation using the FITC filter set."Technical Tips Online. TO. 1319 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Molecular mechanism of peroxisome assembly."Kagaku to Seibutsu. 35 (10). 687-695 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Peroxisome degradation by microautophagy in Pichia pastoris : Identification of specific steps and morphological intermediates."J. Cell Biol.. 141 (3). 625-636 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Regulation of peroxisomal proteins and organelle proliferation by multiple carbon sources in the methylotrophic yeast, Candida boidinii."Yeast. 14 (3). 1175-1187 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Hemiacetal dehydrogenation activity of alcohol dehydrogenases in Saccharomyces cerevisiae."Biosci. Biotechnol. Biochem.. 62 (10). 1956-1961 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Regulation and the physiological role of the DAS1 gene encoding dihydroxyacetone synthase in the methyltrophic yeast Candida boidinii."J. Bacteriol.. 188 (22). 5885-5890 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Looking at vacuoles eating peroxisomes in vivo."Bioscience & Industry.. 56 (10). 657-658 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Dynamism of topology between vacuoles and peroxisomes : Peroxisome microautophagy"Bioscience & Industry.. 56 (10). 683-684 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Cellular functions of the methylotrophic yeast : Their molecular mechanism and applications."Nippon Nogeikagaku Kaishi. 72 (11). 1333-1344 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Molecular mechanism and applications of Cellular functions in the methylotrophic yeast."Nippon Nogeikagaku Kaishi. 72. 405-407 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Subcellular localization of fructosyl amino acid oxidases in peroxisomes of Aspergillus terreus and Penicillium janthinellum."J. Biosci. Bioeng.. 87 (1). 108-111 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "A Novel Hemiacetal Dehydrogenase Activity Involved In Ethyl Acetate Synthesis In Candida utilis."J. Biosci. Bioeng.. 87 (5). 690-692 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Alcohol Oxidase Hybrid Oligomers Formed In vivo and In vitro."Yeast. 15 (12). 1223-1230 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Production of fungal fructosyl amino acid oxidase useful for diabetic diagnosis in the peroxisome of Candida boidinii."FEBS Lett.. 459 (2). 233-237 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Biotechnological application of cellular functions of the methylotrophic yeast."J. Mol. Catalysis B : Enzymatic. 6 (3-6). 77-89 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Peroxisomal Membrane Protein Pmp47 Is Essential in the Metaboism of Middle Chain Fatty Acid In Yeast Peroxisomes and Is Associated with Peroxisome Proliferation."J. Biol. Chem.. 275 (5). 3455-3461 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Environmental response of yeast peroxisomes : organelle assembly and degradation."Cell Biochem. Biophys.. (in press). (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Heterologous gene expression by the methylotrophic yeast system."Kagaku to Seibutsu.. 38 (5) (in press). (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Microbial fructosylaminoacid oxidase useful for diabetic diagnosis. -Biochemical characterization and large-scale production using the methylotrophic yeast gene expression system."Japanese Journal of Clinical Chemistry, Kyusyu-Branch. (in press). (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Regulation of the Formate Dehydrogenase Gene, FDH1, in the Methylotrophic Yeast Candida boidinii and Growth characteristics of an FDH1-Disrupted Strain on Methanol, Methylamine, and Choline."J.Bacteriol.,. 179 (14). 4480-4485 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Sakai: "Trends in Protein Research; Heterologous gene expression system developed n the methylotrophic yeast, Candida boidinii, for useful enzyme production."Polish Academy of Sciences & Japan Society for Promotion of Science. 65-70 (1997)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2001-10-23  

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