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1998 Fiscal Year Final Research Report Summary

Molecular design of inhibitors for DNA replication in Escherichia coli

Research Project

Project/Area Number 09557198
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section展開研究
Research Field Biological pharmacy
Research InstitutionKYUSHU UNIVERSITY

Principal Investigator

SEKIMIZU Kazuhisa  Faculty of Pharmaceutical Sciences, Kyushu University, Professor, 薬学部, 教授 (90126095)

Co-Investigator(Kenkyū-buntansha) MIKI Takeyoshi  Faculty of Pharmaceutical Sciences, Kyushu University, Associate Professor, 薬学部, 助教授 (40037586)
SASAKI Shigeki  Faculty of Pharmaceutical Sciences, Kyushu University, Associate Professor, 薬学部, 助教授 (10170672)
Project Period (FY) 1997 – 1998
KeywordsDnaA protein / Esherichia coli / DNA replication / DNA polymerase III / the dnaN genen / oriC replication
Research Abstract

Initiation of DNA replication in cells is negatively or positively regulated by various factors. We tried to identify those regulating factors by using biochemical and genetic approaches. In crude extacts of E.coli, we identified an activity (RIDA, regulatory inhibition of DnaA protein) which stimulates hydrolysis of ATP bound to DnaA protein, the initiator of DNA replication in E coli. Purification of this factor demonstrated that the beta subunit of DNA polymerase III holoenzyme is responsible for this activity. In a mutant cells of the dnaN gene, which encodes the beta subunit, the ADP-binding form of DnaA protein, which is inactive for DNA replicatoin, was shown to be accumulated. The result confirms that the beta subunit stimulates hydrolysis of ATP bound to DnaA protein. This is the first report indicating that a subunit of DNA polymerase, which is responsible for catalytic reaction of DNA synthesis, negatively regulates initiation of DNA replication.

  • Research Products

    (10 results)

All Other

All Publications (10 results)

  • [Publications] Katayama, T., Kubota, T., Kurokawa, and Sekimizu, K: "The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase." Cell. 94,. 61-71 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mizushima, T., Takaki, T., Katayama, Tand Sekimizu, K.: "Site-directed mutational analysis for the ATP binding of DnaA protein." J. Biol. Chem.273,. 20847-20851 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kurokawa, K., Mizushima, T., Katayama, T., and Sekimizu, K.: "A stimulation factor for hydrolysis of ATP bound to DnaA protein, the initiator of chromosomal DNA replication in Escherichia coli." Biochem. Biophys. Res. Commun.243,. 90-95 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hase, M., Ishikawa, Y., Sekimizu, K., and T. Mizushima: "Effect of glycerol on the affinity of DnaA protein for ATP in the presence of cardiolipin." J. Biochem.123,. 680-683 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ohba, A., Inoue, R., Akimitsu, N., and Sekimizu, K.: "Identification of proteins whose amounts are altered by mutation in the pgsA gene of Escherichia coli." Biol. Pharm Bull.21,. 1139-1141 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Katayama, T., Kubota, T., Kurokawa, K., Crooke, E., and Sekimizu, K.: "The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E.coli chromosomal replicase" Cell. 94. 61-71 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Mizushima T., Takaki, T., Kubota, T., Tsuchiya, T., Miki, T., Katayama, T., and Sekimizu, K.: "Site-directed mutational analysis for the ATP binding of DnaA protein." J.Biol.Chem.273. 20847-20851 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kurokawa, K., Mizushima, T., Kubota, T., Tsuchiya, T., Katayama, T., and Sekimizu, K.: "A stimulation factor for hydrolysis of ATP bound to DnaA protein, the initiator of chromosomal DNA replication in Escherichia coli" Biochem.Biophys.Res.Commun.243. 90-95 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hase, M., Ishikawa, Y., Sekimizu, K., Tsuchiya, T., and T.Mizushima: "Effect of glycerol on the affinity of DnaA protein for ATP in the presence of cardiolipin." J.Biochem.123. 680-683 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ohba, A., Inoue, R., Akimitsu, N., Mizushima, T., and Sekimizu, K.: "Identification of proteins whose amounts are altered by mutation in the pgsA gene of Escherichia coli." Biol.Pharm Bull.21. 1139-1141 (1998)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1999-12-08  

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