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2001 Fiscal Year Final Research Report Summary

Roles of clathrin-adaptor-like proteins in intracellular protein traffic.

Research Project

Project/Area Number 10215201
Research Category

Grant-in-Aid for Scientific Research on Priority Areas (B)

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionKyoto University (2001)
University of Tsukuba (1998-2000)

Principal Investigator

NAKAYAMA Kazuhisa  Kyoto Univ., Grad. Sch. Pharmaceut. Sci., Professor, 薬学研究科, 教授 (40192679)

Co-Investigator(Kenkyū-buntansha) OHNO Hiroshi  Kanazawa Univ., Cancer Res. Inst., Professor, がん研究所, 教授 (50233226)
Project Period (FY) 1998 – 2001
Keywordsclathrin / adapter / GGA / ARF / vesicular transtport / rabaptin-5 / γ-synergin / mannose 6-phosphate receptor
Research Abstract

Clathrin-coated vesicles are involved in protein traffic from the trans-Golgi network (TGN) to lysosomes and in endocytosis of plasma membrane receptors. Recruitment of clathrin onto TGN and plasma membranes is mediated by adaptor protein (AP) complexes. The AP-1 and AP-2 complexes are involved in the formation of clathrin-coated vesicles from the TGN and plasma membrane, respectively. These AP complexes are composed of two large, one medium, and one small subunits. Recently, novel adaptor complexes, AP-3 and AP-4, have been identified and shown to function in the TGN and endosomes. Furthermore, We have recently identified a novel family of adaptor-like proteins, GGA1-GGA3, whose C-terminal ear domains are homologous to that of the, AP-1 γ-adaptin subunit, and shown that they function in the TGN. In this study, we have shown the followings on these adaptor proteins.
a) We have shown that the C-terminal ear domains of γ-adaptin and GGAs bind toγ-synergin and rabaptin-5, which function in the TGN and endosomes. Furthermore, we have revealed the X-ray crystal structures of the γ-adaptin ear domain and shown the molecular basis of its interaction with γ-synergin and rabaptin-5.
b) We have shown that the N-terminal VMS domain of GGAs binds to acidic cluster-dileucine (ACLL) motifs within the cytoplasmic domains of mannose 6-phosphate receptors and sortilin. Furthermore, we have revealed the X-ray crystal structure of the complex between the VHS domain and the ACLL peptide.
c) We have revealed the interaction modes among the AP subunits using the yeast three-hybrid system.

  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] Takatsu, H., et al.: "Similar subunit interactions contribute to assembly of clathrin adaptor complexes and COPI complex : analysis using yeast three-hybrid system"Biochem. Biophys. Res. Commun.. 284. 1083-1089 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ohnishi, J., et al.: "Cloning and characterization of a rat ortholog of MMP-23 (matrix metalloproteinase-23), a unique type of membrane-anchored matrix metalloproteinase and conditioned switching of its expression during the ovarian follicular development"Mol. Endocrinol.. 15. 747-764 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kuwabara, T., et al.: "Significantly higher activity of a cytoplasmic hammerhead ribozyme than a corresponding nuclear counterpart : engineered tRNAs with an extended 3' end can be exported efficiently and specifically to the cytoplasm in mammalian cells"Nucleic Acids Res.. 29. 2780-2788 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Takatsu, H., et al.: "Golgi-localizing, γ-adaptin ear homology domain, ADP-ribosylation factor-binding (GGA) proteins interact with acidic dileucine sequences within the cytoplasmic domains of sorting receptors through their Vps27p/Hrs/STAM (VHS) domains"J. Biol. Chem.. 276. 28541-28545 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shiba, S., et al.: "Structural basis for acidic-cluster dileucine sequence recognition by GGA1"Nature. 415. 937-941 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shinotsuka, C., et al.: "Overexpression of an ADP-ribosylation factor-guanine nucleotide exchange factor, BIG2, uncouples brefeldin A-induced adaptor protein-1 coat dissociation and membrane tubulation"J. Biol. Chem.. 277. 9468-9473 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shiba, Y., et al.: "γ-Adaptin interacts directly with Rabaptin-5 through its ear domain"J. Biochem.. 131. 327-336 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Aguilar, R.C., et al.: "Signal-binding specificity of the μ4 subunit of the adaptor protein complex, AP-4"J. Biol. Chem.. 276. 13145-13152 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tomita, K., et al.: "Cytokine-independent Jak3 activation upon TCR stimulation through direct association of Jak3 and the TCR complex"J. Biol. Chem.. 276. 25378-25385 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ohka, S., et al.: "Basolateral sorting of human poliovirus receptor a involves an interaction with the μ1B subunit of the clathrin adaptor complex in polarized epithelial cells"Biochem. Biophys. Res. Commun.. 287. 941-948 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Blumstein, J., et al.: "The neuronal form of AP-3 is required for synaptic vesicle formation from endosomes"J. Neurosci.. 21. 8034-8042 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yoshimura, S., et al.: "Direct targeting of GM130, a cis-Golgi matrix protein, to the Golgi apparatus"J. Cell Sci.. 114. 4105-4115 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Uekita, T., et al.: "Cytoplasmic tail dependent internalization of membrane-type 1 matrix metalloproteinase (MT1-MMP) is important for its invasion-promoting activity"J. Cell Biol.. 155. 1345-1356 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nakamichi, N., et al.: "Dual mechanisms of Ca2+ increases elicited by N-methyl-D-aspartate in immature and mature cultured cortical neurons"J. Neurosci. Res.. 67. 275-283 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nishimura, K., et al.: "Essential role of S-adenosyltmethionine decarboxylase in mouse embryonic development"Genes Cells. 7. 41-47 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Takatsu, H., et al.: "Similar subunit interactions contribute to assembly of clathrin adaptor complexes and COPI complex : analysis using yeast three-hybrid system"Biochem. Biophys. Res. Commun.. 284. 1083-1089 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ohnishi, J., et al.: "Cloning and characterization of a rat ortholog of MMP-23 (matrix metalloproteinase-23), a unique type of membrane-anchored matrix metalloproteinase and conditioned switching of its expression during the ovarian follicular development"Mol. Endocrinol.. 15. 747-764 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kuwabara, T., et al.: "Significantly higher activity of a cytoplasmic hammerhead ribozyme than a corresponding nuclear counterpart: engineered tRNAs with an extended 3' end can be exported efficiently and specifically to the cytoplasm in mammalian cells"Nucleic Acids Res. 29. 2780-2788 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Takatsu, H., et al.: "Golgi-localizing, γ-adaptin ear homology domain, ADP-ribosylation factor-binding (GGA) proteins interact with acidic dileucine sequences within the cytoplasmic domains of sorting receptors through their Vps27p/Hrs/STAM (VHS) domains"J. Biol. Chem.. 276. 28541-28545 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shiba, S., et al.: "Structural basis for acidic-cluster dileucine sequence recognition by GGA1"Nature. 415. 937-941 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shinotsuka, C., et al.: "Overexpression of an ADP-ribosylation factor-guanine nucleotide exchange factor, BIG2, uncouples brefeldin A-induced adaptor protein-1 coat dissociation and membrane tabulation"J. Biol. Chem. 277. 9468-9473 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shiba, Y., et al.: "γ-Adaptin interacts directly with Rabaptin-5 through its ear domain"J. Biochem.. 131. 327-336 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Aguilar, R.C., et al.: "Signal-binding specificity of the μ4 subunit of the adaptor protein complex, AP-4"J. Blol. Chem.. 276. 13145-13152 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Tomita, K., et al.: "Cytokine-independent Jak3 activation upon TCR stimulation through direct association of Jak3 and the TCR complex"J. Biol. Chem.. 276. 25378-25385 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ohka, S., et al.: "Basolateral sorting of human poliovirus receptor a involves an interaction with the μ1B subunit of the clathrin adaptor complex in polarized epithelial cells"Biochem. Biophys. Res. Commun.. 287. 941-948 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Blumstein, J., et al.: "The neuronal form of AP-3 is required for synaptic vesicle formation from endosomes"J. Neurosci.. 21. 8034-8042 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yoshimura, S., et al.: "Direct targeting of GM130, a cis-Golgi matrix protein, to the Golgi apparatus"J. Cell Sci.. 114. 4105-4115 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Uekita, T., et al.: "Cytoplasmic tail dependent internalization of membrane-type 1 matrix metalloproteinase (MT1-MMP) is important for its invasion-promoting activity"J. Cell Biol.. 155. 1345-1356 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nakamichi, N., et al.: "Dual mechanisms of Ca^<2+> increases elicited by N-methyl-D-aspartate in immature and mature cultured cortical neurons"J. Neurosci. Res.. 67. 275-283 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nishimura, K., et al.: "Essential role of S-adenosyltmethionine decarboxylase in mouse embryonic development"Genes Cells. 7. 41-47 (2002)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2004-04-14  

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