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2001 Fiscal Year Final Research Report Summary

Microscopic imaging and analysis of single molecular function and inter molecular synchronization in Super molecular system

Research Project

Project/Area Number 10308030
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionWaseda University

Principal Investigator

ISHIWATA Shinichi  Waseda University, School of Science and Engineering, Professor, 理工学部, 教授 (10130866)

Co-Investigator(Kenkyū-buntansha) FUJITA Hideaki  ibid, Postdoctoral Fellow of Japan Society for Promotion of Science, 特別研究員(PD) (50318804)
FUNATSU Takashi  Waseda University, School of Science and Engineering, Associate Professor, 理工学部, 助教授 (00190124)
Project Period (FY) 1998 – 2001
KeywordsSupra molecular system / Single molecular function / Microscopic imaging / Molecular motors / SPOC / Molecular synchronization / Kinesin / Actomyosin
Research Abstract

The contractile system of striated muscle, i.e., skeletal and cardiac muscle, spontaneously oscillates under the conditions intermediate between relaxation and contraction. We call this phenomenon SPOC (Spontaneous Oscillatory Contraction), in which each sarcomere oscillates in a thaw-tooth wave form composed of rapid yielding and slow shortening phase. Also, the length oscillation of sarcomere length propagates to the adjacent sarcomeres as a SPOC wave. (1) We found that the oscillation of sarcomere length is synchronized with the external mechanical impulse. When the repetitive stretching and shortening of rectangular wave form were externally imposed on a myofibril with an amplitude of about 10 nm every half-sarcomere, all the sarcomeres began to yield in phase following not only quick stretching but also quick shortening of myofibril. This result demonstrates that myosin motors, which function as a stochastic molecular machine on a single molecular level, are synchronized with the external mechanical impulse. This may be a typical example showing inter-molecular synchronization of proteins (enzymes) in an organized system (MS in prep.). (2) Kinesin is a processive molecular motor that carries organelles towards a plus end of a microtubule (MT) in a cell. We examined the unbinding force of kinesin from MT by using optical tweezers that trap the plastic bead on which single kinesin molecule was attached The unbinding force was measured by pulling a bead along the MT at a constant velocity. We found that, in the presence of 1 mM ADP, the unbinding force distribution showed only one peak at about 3pN. Hence, we could show that the single-headed binding in the presence of ADP was weak according to the model analysis. Combining the results obtained last year, we conclude that kinesin takes either single-headed or double-headed binding depending on the nucleotide state, which is consistent with the hand-over-hand mechanism (MS in prep.).

  • Research Products

    (44 results)

All Other

All Publications (44 results)

  • [Publications] Kinoshita, Jr., K. et al.: "F_1 ATPase : a rotary motor made of a single molecule"Cell. 93. 21-24 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fujita, H., Ishiwata, S.: "Spontaneous Oscillatory Contraction without Regulatory Proteins in Actin Filament-Reconstituted Fibers"Biophys.J.. 75. 1439-1445 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fukuda, N. et al.: "Regulatory roles of MgADP and calcium in tension development of skinned cardiac muscle"J.Muscle Res.Cell Motil.. 19. 909-922 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ishiwata, S. et al.: "Contractile Propertiles of Thin (Actin) Filament-Reconstituted Muscle Fibers"Adv.Exp.Med.Biol.. 453. 319-328 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fukuda, N., Ishiwata S.: "Effects of pH on Spontaneous Tension Oscillation in Skinned Bovine Cardiac Muscle"Pflugers Arch.-Eur.J.Physiol. 438. 125-132 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kato, H. et al.: "Imaging of thermal activation of actomyosin motors"Proc.Natl.Acad. Sci.USA. 96. 9602-9606 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fujita, H., Ishiwata, S.: "Tropomyosin modulates pH dependence of isometric tension"Biophys.J.. 77. 1540-1546 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fukuda, N. et al.: "Effects of MgADP on length dependence of tension generation in skinned rat cardiac muscle"Circ.Res.. 86. e1-e6 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Harada, Y. et al.: "Single-Molecule Imaging of RNA Polymerase-DNA Interactions in Real Time"Biophys.J.. 76. 709-715 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ishii, Y. et al.: "Fluorescence resonance energy transfer between single fluorophores attached to a coiled-coil protein in aqueous solution"Chemical Physics. 247. 163-173 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yasuda, K. et al.: "Focal extraction of surface-bound DNA from a microchip using photo-thermal denaturation"Biotechniques. 28. 1006-1011 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kawai, M. et al.: "Temperature change does not affect force between single actin filaments and HMM from rabbit muscles"Biophys.J.. 78. 3112-3119 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Okano, K. et al.: "Position-specific release of DNA from a chip by using photothermal denaturation"Sensors & Actuators B. 64. 88-94 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kawaguchi, K., Ishiwata, S.: "Temperature dependence of force, velocity and processivity of single kinesin molecules"Biochem.Biophys.Res.Comm.. 272. 895-899 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nishizaka, T. et al.: "Characterization of single actomyosin rigor bonds -Load-dependence of lifetime and mechanical properties-"Biophys.J.. 79. 962-974 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kawaguchi, K., Ishiwata, S.: "Nucleotide-dependent single-to double-headed binding of kinesin"Science. 291. 667-669 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kawaguchi, K., Ishiwata, S.: "Thermal activation of single kinesin molecules with temperature pulse microscopy"Cell Motil.Cytoskel.. 49. 41-47 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 岡野和宣: "DNAプローブアレイを用いたDNA断片回収"電気学会論文誌. 121-E. 181-186 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fukuda, N. et al.: "Acidosis and inorganic phosphate enhance length dependence of tension generation in skinned rat cardiac muscle"J.Physiol.. 536. 153-160 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fukuda, N. et al.: "Length dependence of tension generation in rat skinned cardiac muscle : Role of titin in the Frank-Starling mechanism of the heart"Circulation. 104. 1639-1645 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fujita, H. et al.: "Elementary steps of the cross-bridge cycle in bovine myocardium with and without regulatory proteins"Biophys.J.. 82. 915-928 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Uemura, S. et al.: "Kinesin-microtubule binding is dependent on both nucleotide state and loading direction"Proc.Natl.Acad.Sci.USA.. (in press). (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ishiwata, S. et al.: "Molecular interactions of actin"Springer Verlag. 79-94 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kinosita,Jr.,K., Yasuda,R., Noji,H., Ishiwata,S. and Yoshida,M.: "F1-ATPase : A rotary motor made of a single molecule"Cell. 93. 21-24 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fujita,H. and Ishiwata,S.: "Spontaneous oscillatory contraction without regulatory proteins in actin filament-reconstituted fibers"Biophys.J.. 75. 1439-1445 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ishiwata,S., Funatsu,T. and Fujita,H.: "Contractile properties of thin (actin) filament-reconstituted muscle fibers"Adv.Exp.Med.Biol.. 453. 319-329 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fukuda,N., Fujita,H., Fujita,T. and Ishiwata,S.: "Regulatory roles of MgADP and calcium in tension development of skinned cardiac muscle"J.Muscle Res.Cell Motil.. 19. 909-921 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fukuda,N. and Ishiwata,S.: "Effects of pH on spontaneous tension oscillation in skinned bovine cardiac muscle"Pflugers Arch.. 438. 125-132 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kato,H., Nishizaka,T., Iga,T., Kinosita,Jr.,K. and Ishiwata,S.: "Imaging of thermal activation of actomyosin motors"Proc. Natl. Acad. Sci. USA. 96. 9602-9606 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fujita,H. and Ishiwata,S.: "Tropomyosin modulates pH dependence of isometric tension"Biophys. J.. 77. 1540-1546 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fukuda,N., Kajiwara,H., Ishiwata,S. and Kurihara,S.: "Effects of MgADP on length dependence of tension generation in skinned rat cardiac muscle"Circ. Res.. 86. e1-e6 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yasuda,K., Okano,K. and Ishiwata,S.: "Focal extraction of surface-bound DNA from a microchip using photo-thermal denaturation"Biotechniques. 28. 1006-1011 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kawai,M., Kawaguchi,K., Saito,M. and Ishiwata,S.: "Temperature change does not affect force between single actin filaments and HMM from rabbit muscles"Biophys. J.. 78. 3112-3119 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Okano,K., Yasuda,K. and Ishiwata,S.: "Position-specific release of DNA from a chip by using photothermal denaturation"Sensors & Actuators B. 64. 88-94 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kawaguchi,K. and Ishiwata,S.: "Temperature dependence of force, velocity and processivity of single kinesin molecules"Biochem. Biophys. Res. Comm.. 272(3). 895-899 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nishizaka,T., Seo,R., Tadakuma,H., Kinosita,Jr.,K. and Ishiwata,S.: "Characterization of single actomyosin rigor bonds - Load-dependence of lifetime and mechanical properties-"Biophys. J.. 79(2). 962-974 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kawaguchi, K. and Ishiwata, S.: "Nucleotide-dependent single- to double-headed binding of kinesin"Science. 291. 667-669 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Okano, K., Chen, G., Kohara, Y., Kajiyama, T., Yasuda, K. and Ishiwata, S.: "Recovery of DNA fragment from a DNA probe array"Trans. IEE of Japan. vol.121-E, No.4. 181-186 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kawaguchi, K. and Ishiwata, S.: "Thermal activation of single kinesin molecules with, temperature pulse microscopy"Cell Motil. Cytoskel.. 49. 41-47 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fukuda, N., O-Uchi, J., Kajiwara, H., Sasaki, D., Ishiwata, S. and Kurihara, S.: "Acidosis and inorganic phosphate enhance length dependence of tension generation in skinned rat cardiac muscle"J. Physiol.. 536. 153-160 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fukuda, N., Sasaki, D., Ishiwata, S. and Kurihara, S.: "Length dependence of tension generation in rat skinned cardiac muscle : Role of titin in the Frank-Starling mechanism of the heart"Circulation. 104. 1639-1645 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fujita, H., Sasaki, D., Ishiwata, S. and Kawai, M.: "Elementary steps of the cross-bridge cycle in bovine myocardium with and without regulatory proteins"Biophys. J.. 82. 915-928 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Uemura, S., Kawaguchi, K., Yajima, J., Edamatsu, M., Toyoshima, Y. and Ishiwata, S.: "Kinesin-microtubule binding is dependent on both nucleotide state and loading direction"Proc. Natl. Acad. Sci. U.S.A.. In press. (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ishiwata,S., Tadashige,J., Masui,I., Nishizaka,T. and Kinosita,Jr.,K., eds. C.G. dos Remedios and D.D. Thomas: "Microscopic analysis of polymerization and fragmentation of individual actin filaments, Molecular Interactions of Actin : Actin Structure and Actin-binding Proteins"Springer Verlag, Heidelberg, 79-94. (2001)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2004-04-14  

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