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1999 Fiscal Year Final Research Report Summary

PHYSICO-CHEMICAL STUDY ON PHARAONIS PHOBORHODOPSIN USING ITS RECOMBINANT PROTEIN

Research Project

Project/Area Number 10470473
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Physical pharmacy
Research InstitutionHOKKAIDO UNIVERSITY

Principal Investigator

KAMO Naoki  Hokkaido Univ., Grad. School of Pharmaceutical Sci., Prof., 大学院・薬学研究科, 教授 (10001976)

Co-Investigator(Kenkyū-buntansha) SUMI Masato  Hokkaido Univ., Grad. School of Pharmaceutical Sci., Inst., 大学院・薬学研究科, 助手 (30281819)
NARA Toshifumi  Hokkaido Univ., Grad. School of Pharmaceutical Sci., Inst., 大学院・薬学研究科, 助手 (30241350)
MIYAUCHI Seiji  Hokkaido Univ., Grad. School of Pharmaceutical Sci., Asso. Prof., 大学院・薬学研究科, 助教授 (30202352)
Project Period (FY) 1998 – 1999
Keywordspharaonis phoborhodopsin / expression system / bacteriorhodosin / absorption wavelength / M-intermediate / the decay rate of photo-intermediate / schiff base / Natronobacterium pharaonis
Research Abstract

1. We eastblishied an expression system of pharaonis phoborhodopsin (ppR).
2. A decay of a M-intermediate is very slow, but was accelerated 300-fold by an addition of 100 mM azide.
3. A possible reason of the slow M-decay was proposed and was confirmed experimentally.
4. A possible mechanism of color tuning was considered.
5. Molecular dynamics calculation of ppR was done.

  • Research Products

    (31 results)

All Other

All Publications (31 results)

  • [Publications] M.Iwamoto他3名: "Positioning proton-donating residues to the Schiff-base accelerates the M-decay of pharaonis phoborhodopsin"Biophysical Chem.. 79. 187-192 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Iwamoto他4名: "Proton uptake and release of pharaonis Phoraonis Phoborhodopsin detected by a photoelectrochemical cell"J.Phys.Chem.Part B. 103. 10311-10315 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.Mukai他5名: "Light-induced denaturation of bacteriorhodopsin solubilized by octyl-β-glucoside"Protein Eng. 12. 755-759 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Baba他5名: "Formation and characterization of planar lipid bilayer membranes from synthetic phytanyl-chained glycolipids"Biochim.Biopys.Acta. 1421. 91-102 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] C.Nakazaki他5名: "Effect of detergents on light-induced denaturation of solubilized bacteriorhodopsin"J.Bioscience. 24. 68-68 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Q.Yang他5名: "Partitioning of triphenylalkylphosphonium homologues in gel bead-immobilized liposomes"Biochim.Biopys.Acta. 1417. 122-130 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] J.Hirayama他7名: "Photoinactivation of vesicular stomatitis virus with fullerene conjugated with methoxy polyethelene glycol amine"Biol.Pharm.Bull.. 22. 1106-1109 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Komatsubara他3名: "Cimetidine enhances the antiproliferative effect of 5-fluorouracil on colon caarcinome SW620"Anticancer Res.. 19. 1153-1157 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Abe他5名: "Conjugation of dipeptide to fluorescent dyes enhances its affinity for a dipeptide transporter (PEPT1) in human intestinal Caco-2 cells"Bioconjugate Chem.. 10. 24-31 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Koyama他3名: "Photoelectric response of halorhodopsin from Natronobacterium pharaonis"Bioelectrochem.Bioenerg.. 46. 289-292 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] J.Hirayama他7名: "Virus inactivation in superoxide dismutase preparations by ultraviolet light irradiation"Biol.Pharm.Bull. 21. 621-623 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Ueno他4名: "Control of the unidirectional topological orientation of a cross-linked complex composed of the bacterial photosynthestic reaction center and horse cytochrom c reconstituted into proteoliposomes"J.Biochem.. 124. 485-490 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Takao他3名: "Azide accelerates the decay of M-intermediate of pharaonis phoborhodopsin"Biophys.Chem.. 73. 145-153 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Shimono他3名: "V108 mutant of pharaonis phoborhodopsin : Substitution caused no absorption change but affected its M-state"J.Biochem.. 124. 404-409 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S.Kurosawa他5名: "Peroxidase-mimic activity of plasma-polymerized Fe-phthalocyanine derivatives"J.Photopolymer Sci.Tech.. 11. 313-314 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S. Kurosawa et al.: "Peroxidase-mimic activity of plasma-polymerized Fe-phthalocyanine derivatives."J. Photopolymer Sci.. 11. 313-314 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K. Shimono et al.: "Vl08 mutant of pharaonis phoborhodopsin : Substitution caused no absorption change but affected its M-state."J. Biochem.. 124. 404-409 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K. Takao et al.: "Azide accelerates the decay of M-intermediate of pharaonis : phoborhodopsin."Biophys. Chem.. 73. 145-153 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Ueno et al.: "Control of the unidirectional topological orientation of a cross-linked complex composed of the bacterial photosynthestic reaction center and horse cytochrom c reconstituted into proteoliposomes."J. Biochem.. 124. 485-490 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] J. Hirayama et al.: "Virus inactivation in superoxide dismutase preparations by ultraviolet light irradiation."Biol. Pharm. Bull.. 21. 621-623 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K. Koyama et al.: "Photoelectric response of halorhodopsin from Natronobacterium pharaonis."Bioelectrochem. Bioenerg.. 46. 289-292 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H. Abe et al.: "Conjugation of dipeptide to fluorescent dyes enhances its affinity for a dipeptide transporter (PEPT I) in human intestinal Caco-2 cells. Bioconjugate Chem. 10:24-31"Bioconjugate Chem.. 10. 24-31 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Q. Yang et al.: "Partitioning of triphenylalkylphosphonium homologues in gel bead-immobilized liposomes : chromatographic measurement of their membrane partition coefficients."Biochim. Biophys. Acta. 1417. 122-130 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M. Iwamoto et al.: "Positioning proton-donating residues to the Schiff-base accelerates the M-decay of pharaonis phoborhodopsin expressed in Escherichia coli."Biophysical Chem.. 79. 187-192 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M. Komatubara et al.: "Cimetidine enhances the antiproliferative effect of 5-fluorouracil on colon carcinome SW620."Anticancer Res.. 19(2A). 1153-1157 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Mukai et al.: "Light-induced denaturation of bacteriorhodopsin solubilized by octy1-β-glucoside."Protein Eng.. 12. 755-759 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M. Iwamoto et al.: "Proton uptake and release of pharaonis Phoborhodopsin detected by a photo-electrochemical : cell."J. Phys. Chem. Part B. 103. 10311-10315

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] J. Hirayama et al.: "Photoinactivation of vesicular stomatitis virus with : fullerene conjugated with methoxy : polyethelene glycol amine."Biol. Pharm. Bull.. 22. 1106-1109 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Baba et al.: "Formation and characterization of planar lipid bilayer : membranes from synthetic phytanyl-chained glycolipids."Blochlm. Blopys. Acta. 1421. 91-102 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] C. Nakazaki et al.: "Effect of detergents on light-induced denaturation, of solubilized bacteriorhodopsin."J. Bioscience. 24. 68-68 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Mukai et al.: "Light-induced denaturation of bacteriorhodopsin solubilized by octyl-β-glucoside."J. Bioscience. 24. 68-68 (1999)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2001-10-23  

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