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2001 Fiscal Year Final Research Report Summary

Construction and Application of Supramolecular Assembles Having Regulation Systems for Their Activities

Research Project

Project/Area Number 10650844
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Synthetic chemistry
Research InstitutionTokyo Institute of Technology

Principal Investigator

IKEDA Hiroshi  Tokyo Institute of Technology, Graduate School of Bioscience and Biotechnology, Assistant Professor, 大学院・生命理工学研究科, 助手 (70201910)

Project Period (FY) 1998 – 2001
KeywordsSupermolecule / Artificial Enzyme / Cyclodextrin / Cooperative Effect / Regulation of Activity / Hydrolase
Research Abstract

Natural enzymes have mechanisms to control their activities in response to the concentration of substrates, products or other effectors. In contrast, there have not been many reports of artificial enzymes that have mechanisms to control their activities, although many successful artificial enzymes with high catalytic activity or high substrate selectivity have been reported. Thus, an important area of research in the field of supramolecular chemistry is the development of chemical methods to control the activities of artificial enzymes.
In this project, we constructed new supramolecular assembles having regulation systems, such as an allosteric system.
1) We prepared cyclodextrin dimer (designated βCβH) that has a catalytic site located between two β-cyclodextrins and acts as an artificial hydrolase. βCβH shows homotropic allosteric-like effect.
2) Artificial holoenzymes for benzoin condensation were synthesized using thiazolio-appended β-cyclodextrin dimers. The dimer with an L-aspartic acid residue as a linker for connecting two β-cyclodextrin units caused 26-fold acceleration in the benzoin condensation, whereas the dimer with the linker of a L-glutamic acid residue caused only 7-fold acceleration, indicating that the linker length of the dimer is an important factor in this artificial holoenzyme.
3) β-cyclodextrin derivatives bearing a benzo-crown moiety at the primary- or secondary-hydroxy side were synthesized for molecular recognition toward tryptophan (Trp) in zwitterionic form. The secondary-hydroxy side modification was preferable to the primary-hydroxy side one for recognition of Trp, because the ammonium cation part of Trp was located at the secondary-hydroxy side of the cyclodextrin.

  • Research Products

    (34 results)

All Other

All Publications (34 results)

  • [Publications] S.Usui: "Molecular Dynamics Conformational Search for the Factors that Determine Conformation of Modified Cyclodextrins"Supramol. Chem.. 9. 57-67 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S.Usui: "The Structure of Mono-(3-amino-3-deoxy)-a-cyclodextrin in Aqueous Solution. Molecular Dynamics and NMR Studies"J. Mol. Struct.. 442. 161-168 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Ikeda: "Allosteric Regulation in the Catalytic Aclivity of Cyclodextrin Dimer as an Artificial Hydrolase"Proceedings of 8th International Symposium on Molecular Recognition and Inclusion. 369-372 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] A.Ueno: "Guest-Responsive Eximer Fluorescence of β-Cyclodextrin Bearing a Pendant with Two Pyrene Moieties"Macromol. Rapid. Commun.. 19. 315-317 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.J.Schneider: "NMR Studies of Cyclodextrins and Cyclodextrin Complexes"Chem. Rev.. 98. 1755-1785 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S.Hamai: "^1H-NMR Investigation of Binding of 2-Methylnaphthalene to α-Cyclodextrin in D_2O Solution"J. Inclusion Phenom. Mol. Recognit. Chem.. 31. 265-273 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 池田 博: "シクロデキストリンの反応と分離・分析への応用"化学工学. 62. 585-589 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Kuwabara: "Phenolphthalein-Modified β-Cyclodextrin as a Molecule-Responsive Colorless-to-Color Change Indicator"J. Org. Chem.. 64. 8729-8735 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] A.Ueno: "Fluorescent Cyclodextrins Responsive to Molecules and Metal Ions"J. Org. Chem.. 64. 382-387 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Ikeda: "Thiamine-Appended Cyclodextrin Dimer as a Ligase Model"Proceedings ofthe 9th International Symposium on Cyclodextrin. 129-132 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Aoyagi: "Synthesis and Molecular Recognition Abilities of Modified γ-Cyclodextrins Bearing Two Pyrene Moieties"Proceedings ofthe 9th International Symposium on Cyclodextrin. 137-140 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Ikunaga: "The Effects of Avidin on Inclusion Phenomena and Fluorescent Properties of Biotin-ADnending Dansyl-Modified β-Cyclodextrin"Chem. Eur. J.. 5. 2698-2704 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] I.Suzuki: "Crown Ether-Tethered Cyclodextrins : Superiority of the Secondary-Hydroxyy Side Modification in Binding Tryptophane"J. Chem. Soc. Perkin Trans 2. 1705-1710 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Ikeda: "Artificial Holoenzyme for the Benzoin Condensation Using Thiazolio-Appended β-Cyclodextrin Dimer : The Effect of the Linker Length for Catalytic Activity"Tetrahedron Lett.. 41. 6483-6487 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Aoyagi: "Fluorescence Properties, Induced-Fit Guest Binding and Molecular Recognition Abilities of Modified γ-Cyclodextrins Bearing Two Pyrene Moieties"Bull. Chem. Soc. Jpn.. 74. 157-164 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Imamura: "Enhanced Binding Ability of β-Cyclodextrin Bearing Seven Hydrophobic Chains Each with a Hydrophilic End Group"Chem. Lett.. (in press). (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] A.Ueno: "Molecular and Supramolecular Photochemistry 8"Marcel Dekker, New York. 757 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S. Usui, H. Ikeda, et al.: "Molecular Dynamics Conformational Search for the Factors that Determine Conformation of Modified Cyclodextrins"Supramol. Chem.. 9. 57-67 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] S. Usui, H. Ikeda, et al.: "The Structure of Mono-(3-amino-3-deoxy)-α-cyclodextrin in Aqueous Solution Molecular Dynamics and NMR Studies"J. Mol. Struct.. 442. 161-168 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H. Ikeda, et al.: "Allosteric Regulation in the Catalytic Activity of Cyclodextrin Dimer as an Artificial Hydrolase"Proceedings of 8th International Symposium on Molecular Recognition and Inclusion. 369-372 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A. Ueno, H. Ikeda, et al.: "Guest-Responsive Eximer Fluorescence of β-Cyclodextrin Bearing a Pendant with Two Pyrene Moieties"Macromol. Rapid. Commun.. 19. 315-317 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H. J. Schneider, H. Ikeda, et al.: "NMR Studies of Cyclodextrins and Cyclodextrin Complexes"Chem. Rev.. 98. 1755-1785 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] S. Hamai, H. Ikeda, et al.: "^1H-NMR Investigation of Binding of 2-Methylnaphthalene to α-Cyclodextrin in D_2O Solution"J. Inclusion Phenom. Mol. Recognit. Chem.. 31. 265-273 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H. Ikeda, et al.: "Application of Cyclodextrins to Reactions, Separations, and Analyses"Kagakukougaku. 62. 585-589 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Kuwabara, H. Ikeda, et al.: "Phenolphthalein-Modified β-Cyclodextrin as a Molecule-Responsive Colorless-to-Color Change Indicator"J. Org. Chem.. 63. 8729-8735 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A. Ueno, H. Ikeda, et al.: "Fluorescent Cyclodextrins Responsive to Molecules and Metal Ions. The Fluorescence Properties and Inclusion Phenomena of Na-Dansyl-L-Lysine-β-Cyclodextrin and Monensin-incorporated Na-Dansyl-L-Lysine-β-Cyclodextrin"J. Org. Chem.. 64. 382-387 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H. Ikeda, et al.: "Thiamine-Appended Cyclodextrin Dimer as a Ligase Model"Proceedings of the 9th International Symposium on Cyclodextrin. 129-132 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Aoyagi, H. Ikeda, et al.: "Synthesis and Molecular Recognition Abilities of Modified γ-Cyclodextins Bearing Two Pyrene Moieties"Proceedings of the 9th International Symposium on Cyclodextrin. 137-140 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Ikunaga, H. Ikeda, et al.: "The Effects of Avidin on Inclusion Phenomena and Fluorescent Properties of Biotin-Appending Dansyl-Modified β-Cyclodextrin"Chem. Eur. J.. 5. 2698-2704 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] I. Suzuki, H. Ikeda, et al.: "Crown Ether-Tethered Cyclodextrins : Superiority or the Secondary-Hydroxyl Side Modification in Binding Tryptophane"J. Chem. Soc. Perkin Trans. 2. 1705-1710 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H. Ikeda, et al.: "Artificial Holoenzyme for the Benzoin Condensation Using Thiazolio-Appended β-Cyclodextrin Dimer : The Effect of the Linker Length for Catalytic Activity"Tetrahedron Lett.. 41. 6483-6487 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Aoyagi, H. Ikeda, et al.: "Fluorescence Properties, Induced-Fit Guest Binding and Molecular Recognition Abilities of Modified γ-Cyclodextrins Bearing Two Pyrene Moieties"Bull. Chem. Soc. Jpn.. 74. 157-164 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A. Ueno and H. Ikeda: "Supramolecular Photochemistry of Cyclodextrin Materials"In Molecular and Supramolecular Photochemistry 8, Marcel Dekker, New York. 461-503 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K. Imamura, H. Ikeda, et al.: "Enhanced Binding Ability of β-Cyclodextrin Bearing Seven Hydrophobic Chains Each with a Hydrophobic End Group"Chem. Lett.. (in press.). (2002)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2003-09-17  

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