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2000 Fiscal Year Final Research Report Summary

A Comprehensive Study on Intrusion and Cooperation of Genomes

Research Project

Project/Area Number 11490007
Research Category

Grant-in-Aid for Scientific Research (B).

Allocation TypeSingle-year Grants
Section一般
Research Field 広領域
Research InstitutionThe University of Tokyo

Principal Investigator

SHIMA Akihiro  Graduate School of Frontier Sciences, The University of Tokyo, Prof., 大学院・新領域創成科学研究科, 教授 (60011590)

Co-Investigator(Kenkyū-buntansha) UEDA Takuya  Grad.Sch.Frontier Sciences, The University of Tokyo, Prof., 大学院・新領域創成科学研究科, 教授 (80184927)
HASEZAWA Seiichiro  Grad.Sch.Frontier Sciences, The University of Tokyo, Prof., 大学院・新領域創成科学研究科, 教授 (40172902)
AMEMIYA Shounan  Grad.Sch.Frontier Sciences, The University of Tokyo, Prof., 大学院・新領域創成科学研究科, 教授 (30011670)
OHYA Yoshikazu  Grad.Sch.Froniter Sciences, The University of Tokyo, Prof., 大学院・新領域創成科学研究科, 教授 (20183767)
KAWANO Shigeyuki  Grad.Sch.Frontier Sciences, The University of Tokyo, Prof., 大学院・新領域創成科学研究科, 教授 (70161338)
Project Period (FY) 1999 – 2000
Keywordstelomere / gene homing / extrachromosomal DNA / caspase / polysemous codon / germ cell mutation / single-pollen analysis / prothoracic glands
Research Abstract

Endonuclease domain of telomere associated non-LTR retrotransposon, TRAS1 of the silkworm could recognize and cleave the telomeric repeat (TTAGG) n. Yeast PI-SceI was used as a model system to study molecular mechanism of gene homing. Gene organization, replication system and expression of extrachromosomal DNAs from plant mycoplasma mutant lines and its relationship with host specificity and pathogenicity were analyzed, DEVDase activation was correlated with cyclobutane pyrimidine dimers, but the UVC-induced apoptosis occurred independent of the caspase-3-like activation in the Medaka cells. The molecular mechanism of emergence of polysemous codon was clarified by analyzing leucine acceptance of mutant tRNAs synthesized in vitro. Crossing of the Medaka of the HNI strain to those of the T5 tester strain revealed that the female germ cells of the HNI strain showed a remarkably higher spontaneous total mutation rates compared to that found for those of the males, however, the spontaneous … More viable mutation rates were lower in females than males, indicating that the spontaneous mutations in female germ cells are associated with larger deletions of the genome. Several STS makers were isolated from the dioecious plant, Silene latifolia, and then single-pollen analysis and isolation of a BAC clone were accomplished. Mechanism of inhibition and acclimation of photosynthetic machinery to environmental stress and its significance were studied from the evolutional point of view. Dynamics and roles of cortical microtubules in higher plant cells were investigated using living cells stably expressing GFP-tubulin proteins. The regulatory genes, Hox, Otx, and the engrailed were cloned from a sea lily, Metacrinus rotundus, for analyzing the expression pattern. A nine-residue peptide inhibiting ecdysteroid biosynthesis in the prothoracic glands was isolated from the larval brains of the silkworm, Bombyx mori. Ligand specificity of olfactory receptors was investigated in a functionally-reconstituted system. Differentiation of the intestinal crypt cells to the epithelium was characterized using IEC-6 cells transfected with a homeobox gene, Cdx-2. Proliferation and differentiation of neural stem cells are regulated by a tumor suppressor, p53. Novel members of visual pigment genes and their genomic organizations were revealed in New World primates and zebrafish. Less

  • Research Products

    (38 results)

All Other

All Publications (38 results)

  • [Publications] Minokawa,T. et al.: "Timing of the potential of micromere-descendants in echinoid embryos to induce endoderm differentiation"Dev.Growth Differ.. 41. 535-547 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kurokawa,D. et al.: "HpEts, an ets-related transcription factor implicated in primary mesenchyme cell differentiation of the -"Mechanisms of development. 80. 41-52 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sonoike,K.: "The different roles of chilling temperatures in the photoinhibition of photosystem I and photosystem II."J.Photochem.Photobiol.B:Biol.. 48. 136-141 (1999)

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      「研究成果報告書概要(和文)」より
  • [Publications] Nakashima,K. et al.: "Synergistic signaling in fetal brain by STAT3-Smad1-"Science. 284. 479-482 (1999)

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      「研究成果報告書概要(和文)」より
  • [Publications] Yamada,K. et al.: "NMDA receptor mediated Ca2+ responses in neurons-"Neurosci.Lett.. 264. 165-167 (1999)

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      「研究成果報告書概要(和文)」より
  • [Publications] Nakashima,K. et al.: "Developmental requirement of gp 130 signaling in-"J.Neurosci.. 19. 5429-5434 (1999)

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      「研究成果報告書概要(和文)」より
  • [Publications] Touhara K. et al.: "Functional identification and reconstitution of an-"Proc.Natl.Acad.Sci.,U.S.A.. 96. 4040-4045 (1999)

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      「研究成果報告書概要(和文)」より
  • [Publications] Kumagai,F. et al.: "Putative involvement of a 49 kDa protein in microtubule"Eur.J.Cell Biol.. 78. 109-116 (1999)

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      「研究成果報告書概要(和文)」より
  • [Publications] Takahashi,H. et al.: "Transcription analysis of the telomeric repeat-specific"Nucl.Acids Res.. 27. 2015-2021 (1999)

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      「研究成果報告書概要(和文)」より
  • [Publications] Satake,S. et al.: "Bombyxin secretion in the adult silkmoth Bombyx mori"J.Insect Physiol.. 45. 939-945 (1999)

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      「研究成果報告書概要(和文)」より
  • [Publications] Nagata,K. et al.: "Prothoracicotropic activity of SBRPs ; the insulin-like"Biochem.Biophys.Res.Commun.. 266. 575-578 (1999)

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      「研究成果報告書概要(和文)」より
  • [Publications] Satu,H. et al.: "Hypertonicity stimulates taurine uptake and transporter"Biochi.Biophys.Acta. 1419. 89-96 (1999)

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      「研究成果報告書概要(和文)」より
  • [Publications] Amemiya,S. & Kitazawa,C.: "Regulating potential in development throughout meta-"Dev.Growth Differ.. (In press). (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kawamura,S.: "Evolution of red-green visual pigment genes and color-"Primate Research. 16. 111-124 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hisatsune,T., et al.: "Immortalized hippocampal neural precursor cell lines"Cytotechnology. 33. 53-61 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Miyamoto,Y., et al.: "Regulation of amino acid transporters by interferon-"Essential Amino Acid Res.. 158. 6-13 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ueda,T.: "Modification defect at anticodon wobble nucleotide of-"J.Biol.Chem.. 275. 4251-4257 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ohya,Y., et al.: "A fluorescent indicator for detecting protein-protein-"Anal.Chem.. 72. 5151-5157 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hasezawa,S.: "Time-sequence observations of microtubule dynamics-"Plant Cell Physiol.. 41. 244-250 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Touhara,K.: "Molecular mechanism of odor recognition : Biochemistry-"Cell Technology. 19. 111-119 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fujiwara,H. et al.: "Expression of ecdysteroid-regulated genes is reduced-"Dev.Genes Evol.. 210. 120-128 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Namba,S., et al.: "In planta expression of a protein encoded by the extra-"Microbiology. (in press). (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kataoka,H., et al.: "Dynamic regulation of prothoracic gland ecdysteroidogenesis-"Insect Biochem.Mol.Biol.. 30. 1079-1089 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mitani,H.,Shima,A. et al.: "A detailed linkage map of Medaka,Oryzias latipes-"Genetics. 154. 1773-1784 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sonoike,K.: "Probing Photosynthesis : Mecahnism,Regulation and Adaptation"Taylor & Francis,London. (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kitazawa, C.and Amemiya, S.: "Regulating potential in development throughout metamorphosis of a direct developing echinoid, Peronella japonica"Dev.Growth Differ. (in press). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Sonoike, K.: "Photoinactivation of the two photosystems in oxygenic photosynthesis-Mechanisms and regulations."Probing Photosynthesis : Mechanism, Regulation and Adaptation (2000) pp.293-309 (M.Yunus, U.Pathre and P.Mohanty, eds.), Taylor & Fancis, London..

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kawamura, S.: "Evolution of red-greenvisual pigment genes and color vision of New World monkeys."Primate Research. 16. 111-124 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hisatsune T, et al.: "Immortalized hippocampal neural precursor cell lines."Cytotechnology. 33. 53-61 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Miyamoto, Y.et al.: "Regulation of amino acid transportersby interferon-gamma in the intestinal epithelial cells."Essential Amino Acid Res.. 158. 6-13 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ueda, T.: "Modification defect at anticodon wobble nucleotide of mitochondrial tRNAs^<Leu> (UUR) with pathogenic mutations of mitochondrial myopathy, encephalopahty, lactic acidosis, and stroke-like episodes."J.Biol.Chem.. 275. 4251-4257 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ohya Y., et al.: "A fluorescent indicator for detecting protein-protein interactions in vivo based on protein splicing."Anal.Chem.. 72. 5151-5157 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hasezawa S.: "Time-sequence observations of microtubule dynamics throughout mitosis in living cell suspensions of stable transgenic Arabidopsis. -Direct evidence for the origin of cortical microtubules at M/G1 interface"Plant Cell Physiol. 41. 244-250 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Touhara, K.: "Molecular mechanism of odor recognition : biochemistry and molecular biology of olfactory receptors"Cell Technology. 19. 111-119 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fujiwara, H,. et al.: "Expression of ecdysteroid-regulated genes is reduced specifically in the wing discs of the wing-deficient mutant (fl) of Bombyxmori."Dev.Genes Evol.. 210. 120-128 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Namba, S., et al.: "In planta expression of a protein encoded by the extrachromosomal DNA of phytoplasma and related to geminivirus replication proteins."Microbiology. (in press). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kataoka, H., et al.: "Dynamic regulation of prothoracic gland ecdysteroidogenesis : Manduca sexta recombinant prothoracicotropichormone and brain extracts have identical effects."Insect.Biochem.Mol.Biol.. 30. 1079-1089 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Mitani, H., Shima, A., et al.: "A detailed linkage map of Medaka, Oryzias latipes : Comparative genomics and genome evolution"Genetics. 154. 1773-1784 (2000)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2002-03-26  

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