• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to project page

2001 Fiscal Year Final Research Report Summary

Development of super catalytic antibody and application to new biosensor

Research Project

Project/Area Number 11793007
Research Category

Grant-in-Aid for University and Society Collaboration

Allocation TypeSingle-year Grants
Research Field 生物・生体工学
Research InstitutionHiroshima Prefectural University

Principal Investigator

UDA Taizo  Hiroshima Prefectural University, School of Biosciences, Professor, 生物資源学部, 教授 (20232837)

Co-Investigator(Kenkyū-buntansha) FUJII Ryoji  Fukuyama medical laboratory, Research Division, senior researcher, 研究部, 部長
HIFUMI Emi  Hiroshima Prefectural University, School of Biosciences, Assistant Professor, 生物資源学部, 助手 (90254606)
EGASHIRA Naoyoshi  Hiroshima Prefectural University, School of Biosciences, Professor, 生物資源学部, 教授 (90094060)
Project Period (FY) 1999 – 2001
Keywordscatalytic antibody / biosensor / electrode / gene / protein / antigen / gemline / substrate
Research Abstract

1. Many antibody genes were analyzed and then the enzymatic activities of the subunits were investigated. As the consequence, a characteristic feature that the catalytically active antibodies have the unique structure like catalytic triad in their conformation was revealed. The three dimensional structures of 91 monoclonal antibodies were examined using PDB and ours data. Over 30% of the antibodies possess the catalytic triad-like structure in their conformation. This means that such gene as being able to construct the catalytic triad-like structure is inherently present in germ line. The peptidase or/and protease activity of the antibody was observed whenever such structure was confirmed in the conformation by the molecular modeling.
2. We have found out some natural catalytic antibodies (the super catalytic antibody belongs to this category) for three years research program. The light and heavy chain of i41SL1-2 antibody displayed a short induction period and then high catalytically active phase started to decompose the antigen, resulting two phases reaction. These subunits of i41SL1-2 antibody showed similar behavior as a serine protease in the enzymatic reaction. Regarding the immunoaffinity to the antigen, they showed higher value than trypsin. On the other hand, with respect to kcat, the subunits displayed lower value in comparison with that of trypsin. Thus, the catalytic antibody is defined as a molecule situating between antibody and enzyme from the viewpoint of specificity and catalysis.
3. A new sensing system was accomplished using the reaction between some ruthenium complexes and amino acid (or peptide) which could be detected with the sensitivity of around 10^<-6>/M

  • Research Products

    (17 results)

All Other

All Publications (17 results)

  • [Publications] E.Hifumi, Y.Okamoto, T.Uda: "Super Catalytic Antibody [I] : Decomposition of targeted protein by its antibody light chain"J.Biosci.Bioeng.. 88. 323-327 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Nishimura, E.Hifumi, K.Shimizu, N.Egashira, T.Uda: "Amplification of SPR responses for the immunoreaction using anti HIV gp41 antibody by the method of molecular accumulation"Trans.IEEE Jpn.. 119-E. 522-527 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Uda, E.Hifumi, K.Ohara: "Catalytic activity of antibody light chain to gp41 : A consideration of refolding in relation to activation mechanism"Chem.Immunol.. 77. 18-32 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] E.Hifumi, K.Ohara, Y.Niimi, T.Uda: "Removal of catalytic activity by EDTA from antibody light chain"BioMetals. 13. 289-294 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.Zhou, E.Hifumi, Y.Niimi, T.Uda: "Preparation and immunological features of syngeneic monoclonal anti-idiotypic antibody using complementarity determining region(CDR) peptide as the immunogen"Lett.Peptide Science. 7(5). 299-310 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Uda, K.Inoue, T.Nishimura, E.Hifumi, K.Shimizu, N.Egashira: "Simultaneous detection of two antigens by surface plasmon resonance sensor"Electrochemistry. 69. 976-979 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 宇田泰三, 一二三恵美: "最新酵素利用技術と応用展開(バイオテクノロジーシリーズ)"シーエムシー. 370 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] E. Hifumi, Y. Okamoto, T. Uda: "Super Catalytic Antibody [I] : Decomposition of targeted protein by its antibody light chain."J. Biosci. Bioeng.. 88. 323-327 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T, Nishimura, E. Hifumi , K. Shimizu, N. Egashira, T. Uda: "Amplification of SPR responses for the immunoreaction using anti HIV gp41 antibody by the method of molecular accumulation."Trans. IEEE Jpn.. 119-E. 522-527 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Suzuki, N. Sugino, T. Fukaya, S. Sugiyama, T. Uda, R. Takaya, A. Yajima, H. Sasano: "Super oxide dismutase in normal cycling human ovaries : immunohistochemical localization and characterization."Fertility and Sterility. 72(4). 720-726 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] E. Hifumi, Y. Okamoto, T. Uda: "How and why 41S-2 antibody subunits acquire the activities to catalyze decomposition of the conserved sequence of gp41 of HIV-1."Appl. Biochem. Biotech.. 83. 209-220 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Uda, E. Hifumi, K. Ohara: "Catalytic activity of antibody light chain to gp41 : A consideration of refolding in relation to activation mechanism."Chem. Immunol.. 77. 18-32 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] E. Hifumi, H. Sakata, M. Nango, T. Uda: "Design of artificial molecular catalyst showing peptidase activity to the conserved sequence of HIV-1 envelope gp41."J. Mol. Catal. A : Chemical. 155. 209-218 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] E. Hifumi, K. Ohara, Y. Niimi, T. Uda: "Removal of catalytic activity by EDTA from antibody light chain."BioMetals. 13. 289-294 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. Zhou, E. Hifumi, Y. Niimi, T. Uda: "Preparation and immunological features of syngeneic monoclonal anti-idiotypic autibody using complementarity determining region (CDR) peptide as the immunogen."Lett. Peptide Science. 7. 299-310 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Uda, K. Inoue, T. Nishimura, E. Hifumi, K. Shimizu, N. Egashira: "Simultaneous detection of two antigens by surface plasmon resonance sensor."Electrochemistry. 69. 976-979 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Uda, E. Hifumi: "Challenge of super catalytic antibody, Advanced Enzyme-based Techniques with Comprehensive Applications"CMC(Tokyo). 57-70 (2001)

    • Description
      「研究成果報告書概要(欧文)」より

URL: 

Published: 2003-09-17  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi