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2004 Fiscal Year Final Research Report Summary

Identification of genes silenced in human gastric cancers

Research Project

Project/Area Number 12213150
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionNational Cancer Center

Principal Investigator

USHIJIMA Toshikazu  National Cancer Center Research Institute, Chief, 部長 (90232818)

Co-Investigator(Kenkyū-buntansha) KANEDA Atsushi  National Cancer Center Research Institute, Staff, 研究員 (10313024)
Project Period (FY) 2000 – 2004
KeywordsDNA methylation / Epigenetics / Genome-wide screening / Gastric cancers / Rat / MS-RDA / CpG islands / Lysyl oxidase
Research Abstract

(1) DNA fragments aberrantly methylated in N-methyl-N'-nitro-N-nitrosoguanidine (MNNG) were searched for using a genome-wide screening technique, methylation-sensitive-representational difference analysis (MS-RDA). However, no silenced genes were identified. (2) Using surgical specimens of human gastric cancers, we identified methylation of a region within the INSIGI promoter CpG island and decreased INSIGI expression in association with the methylation. We also identified methylation of a CpG island covering exon 8 of p4lArc, a subunit of the Arp2/3 complex. Although its methylation was not associated with its reduced expression, expression of seven subunits of the Arp2/3 complex was frequently decreased in gastric cancers. (3) MS-RDA was performed using human gastric cancer cell lines, and we identified nine CpG islands that were in 5' regions and densely methylated. Treatment of gastric cancer cell lines with a demethylating agent, 5-aza-2'-deoxycitidine, confirmed that their downstream genes, LOX, HRASLS, FLNc, HAND1, Thrombomodulin, bA305P22.2.3, a homologue of RIKEN2210016F16, FL 132130, and PGAR, were silenced by the methylation of the 5 CpG islands. The first five genes were methylated in 12-17 (29-41 %) of 41 surgical specimens, and the methylation was associated with reduced gene expression. (4) LOX and HRASLS, which were known to induce reversion of ras-transformants, were introduced into gastric cancer cell lines. LOX was found to suppress cell growth, the number of colonies in soft agar, and sizes of tumors transplanted into nude mice, while HRASLS did not. (5) Frequent methylation of CpG islands and frequent demethylation of normally methylated CpG islands were analyzed in 93 gastric cancer surgical specimens. Frequent methylation and frequent demethylation were found in different sets of gastric cancers.

  • Research Products

    (16 results)

All 2004 2003 2002 2001

All Journal Article (16 results)

  • [Journal Article] Frequent hypomethylation in multiple promoter CpG islands is associated with global hypomethylation, but not with frequent promoter hypermethylation.2004

    • Author(s)
      Kaneda, A. 他
    • Journal Title

      Cancer Sci. 95

      Pages: 58-64

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Decreased expression of the seven ARP2/3 complex genes in human gastric cancers.2004

    • Author(s)
      Kaneda, A.他
    • Journal Title

      Cancer Lett 212

      Pages: 203-210

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Lysyl oxidase is a tumor suppressor gene inactivated by methylation and loss of heterozygosity in human gastric cancers.2004

    • Author(s)
      Kaneda, A.他
    • Journal Title

      Cancer Res. 64

      Pages: 6410-6415

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Focus on gastric cancer.2004

    • Author(s)
      Ushijima, T., Sasako, M.
    • Journal Title

      Cancer Cell 5

      Pages: 121-125

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Decreased expression of the seven ARP2/3 complex genes in human gastric cancers.2004

    • Author(s)
      Kaneda, A, Kaminishi, M, Sugimura, T, Ushijima, T.
    • Journal Title

      Cancer Lett 212

      Pages: 203-10

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Frequent hypomethylation in multiple promoter CpG islands is associated with global hypomethylation, but not with frequent promoter hypermethylation.2004

    • Author(s)
      Kaneda, A, Tsukamoto, T, Takamura-Enya, T, Watanabe, N, Kaminishi, M, Sugimura, T, Tatematsu, M, Ushijima, T.
    • Journal Title

      Cancer Sci 95

      Pages: 58-64

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Lysyl oxidase is a tumor suppressor gene inactivated by methylation and loss of heterozygosity in human gastric cancers.2004

    • Author(s)
      Kaneda, A, Wakazono, K, Tsukamoto, T, Watanabe, N, Yagi, Y, Tatematsu, M, Kaminishi, M, Sugimura, T, Ushijima, T.
    • Journal Title

      Cancer Res 64

      Pages: 6410-5

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Focus on gastric cancer.2004

    • Author(s)
      Ushijima, T, Sasako, M.
    • Journal Title

      Cancer Cell 5

      Pages: 121-5

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Methylation-sensitive-representational difference analysis and its application to cancer research.2003

    • Author(s)
      Kaneda, A.他
    • Journal Title

      Ann.N.Y.Acad.Sci. 983

      Pages: 131-141

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Methylation-sensitive representational difference analysis and its application to cancer research.2003

    • Author(s)
      Kaneda, A, Takai, D, Kaminishi, M, Okochi, E, Ushijima, T.
    • Journal Title

      Ann N Y Acad Sci 983

      Pages: 131-41

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Reduced expression of the Insulin-induced protein 1 and p4l ARP2/3 complex genes in human gastric cancers.2002

    • Author(s)
      Kaneda, A.他
    • Journal Title

      Int.J.Cancer 100

      Pages: 57-62

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Identification of silencing of nine genes in human gastric cancers.2002

    • Author(s)
      Kaneda, A.他
    • Journal Title

      Cancer Res. 62

      Pages: 6645-6650

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Reduced expression of the insulin-induced protein 1 and p41 Arp2/3 complex genes in human gastric cancers.2002

    • Author(s)
      Kaneda, A, Kaminishi, M, Nakanishi, Y, Sugimura, T, Ushijima, T.
    • Journal Title

      Int J Cancer 100

      Pages: 57-62

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Identification of silencing of nine genes in human gastric cancers.2002

    • Author(s)
      Kaneda, A, Kaminishi, M, Yanagihara, K, Sugimura, T, Ushijima, T.
    • Journal Title

      Cancer Res 62

      Pages: 6645-50

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Silencing of HTR1B and reduced expression of EDN1 in human lung cancers, revealed by methylation-sensitive representational difference analysis.2001

    • Author(s)
      Takai, D.他
    • Journal Title

      Oncogene 20

      Pages: 7505-7513

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Silencing of HTR1B and reduced expression of EDN1 in human lung cancers, revealed by methylation-sensitive representational difference analysis.2001

    • Author(s)
      Takai, D, Yagi, Y, Wakazono, K, Ohishi, N, Morita, Y, Sugimura, T, Ushijima, T.
    • Journal Title

      Oncogene 20

      Pages: 7505-13

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2008-05-27  

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