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2002 Fiscal Year Final Research Report Summary

Molecular Mechanism and Molecular Evolution of Glycosidases

Research Project

Project/Area Number 12460035
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionHOKKAIDO UNIVERSITY

Principal Investigator

MORI Haruhide  Hokkaido Univ. Grad. School of Agr., Asso. Prof., 大学院・農学研究科, 助教授 (80241363)

Co-Investigator(Kenkyū-buntansha) FUKUSHI Yukiharu  Hokkaido Univ. Grad. School of Agr., Lec., 大学院・農学研究科, 講師 (60218906)
KIMURA Atsuo  Hokkaido Univ. Grad. School of Agr., Prof., 大学院・農学研究科, 教授 (90186312)
Project Period (FY) 2000 – 2002
Keywordsα-glucosidase / glycosidase / molecular evolution
Research Abstract

α-Glucosidase (EC 3.2.1.20), an exo-type glycosidase releasing α-glucose from substrate, is divided into two types of groups (family I and family II) that have different structures and substrate recognition. There are also the glycosidases, of which structures are homologous to each of family enzyme, such as α-amylase for family I and α-xylosidase for family II. The purpose of the project is to investigate the relationship of structure and function of two α-glucosidase families, and to understand the molecular mechanism of glycosidases. 1)The catalytic amino acid residues of two family enzymes were identified. Their functions were also analyzed. 2)The amino acids recognizing the glycon and aglycon moieties of substrate were identified. Two α-glucosidase groups showed the different recognition against the hydroxyl group in the glycon. 3)The crystal of enzyme was prepared. 4)The α-secondary kinetic isotope effects were observed, suggesting the formation of oxo-carbenium ion intermediate in the catalytic reaction. 5)The molecular analysis succeeded in elucidating the function and structure of two α-glucosidase families, and the findings are important to reveal the molecular mechanism of glycosidases homologous to family enzymes.

  • Research Products

    (44 results)

All Other

All Publications (44 results)

  • [Publications] A.Kimura: "Molecular Anatomy of α-Glucosidase"Trends In Glycosci.Glycotechnol.. 12・68. 373-380 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Takayanagi: "Evidence for A Single Acive Site on Isomalto-dextranase with Hydrolysis Activities of α-1,6-and α-1,4-Glucosidic Linkages"J.Appl.Glycosci.. 48・1. 55-61 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Okuyama: "Carboxil Group of Asp-647 Residues as Possible Proton Donor in Catalytic Reaction of α-Glucosidase from Schizosaccharomyces pombe"Eur.J.Biochem.. 268・8. 2270-2280 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Nishimoto: "Purification and Substrate Specificity of Honeybee, Apis mellifera L.,α-Glucosidase III"Biosci.Biotechnol.Biochem.. 65・7. 1610-1616 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Mizuno: "Isolation and Sequence of Puntative α-Glucosidase Gene from Brevibacterium fuscum var.dextranlyticum Strain 0407"J.Appl.Glycosci.. 48・3. 287-291 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] A.Kimura: "Reaction Mechanism of Glycosylase"Trands In Glycosci.Glycotechnol.. 13・Sup. SA-B01J (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] J.-H.Lee: "Purification and Identification of Essential Ionizable Groups of Honeybee, Apis mellifera L., Trehalase"Biosci.Biotechnol.Biochem.. 65・12. 2657-2665 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.-M.Kim: "Production of Maltopentaose and Biochemical Characterization of Maltopentaose-Forming Amylase"J.Microbiol.Biotechnol.. 11・4. 636-643 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.-M.Kim: "Isolation of Bacillus sp.Air-5 Producing Maltopentaose Forming Amylase and Optimization of Maltopentaose Production"Kor.J.Biotechnol.Bioeng.. 16・3. 246-252 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Mori: "Modulation of Activity and Substrate Binding Modes by Mutation of Single and Double Subsites+1/+2 and -5/-6 of Barley α-Amylase 1"Eur.J.Biochem.. 268・24. 6545-6558 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Nishimoto: "Study on Three α-Glucosidase Isozymes from Honeybee, Apis mellifera L."J.Appl.Glycosci.. 49・2. 191-197 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Okuyama: "Catalytic Amino Acid Residue Providing Proton Donar in α-Glucosidase Family II"J.Appl.Glycosci.. 49・2. 211-219 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Okuyama: "Mutant Catalyzes α-Glucosynthase-type Reaction"Biosci.Biotechnol.Biochem.. 66・4. 928-933 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Takayanagi: "Evaluation of Subsite Affinities of Isomalto-dextranase from Arthrobacter globiformis"J.Appl.Glycosci.. 49・2. 123-127 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Fukuda: "Kinetic Studies on Substrate Specificity and Active Site of β-D-Glucosidase F1 from Streptomyces sp."J.Appl.Glycosci.. 49・3. 265-272 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Fukuda: "Identification of Essential Ionizable Groups and Evaluation of Subsite Affinities in the Active Site of β-D-Glucosidase F1 from Streptomyces sp."Biosci.Biotechnol.Biochem.. 66・10. 2060-2067 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Nishio: "Glycon Specificity Profiling of α-Glucosidase Using Monodeoxy and Mono-O-methyl Derivatives of p-Nitrophenyl α-D-Glucopyranoside"Carbohydr.Res.. 337・7. 629-634 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Mori: "Barley α-amylase Met53 situated at the high-affinity subsite-2 belongs to a substrate binding motif in the α→β loop 2 of the catalytic (β/α)_8-barrel and is critical for activity and substrate specificity"Eur.J.Biochem.. 269・22. 5377-5390 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] B.Svensson: "Fascinating Facets of Function and Structure of Amylolytic Enzymes of Glycoside Hydrolase Family 13"Biologia. 57.Suppl 11. 5-19 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Son: "Evidence of Intramolecular Transglucosylation Catalyzed by an α-Glucosidase"J.Appl.Glycosci.. 50・1. 41-44 (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] San San Mar: "Purification, Characterization, and Sequence Analysis of Two α-Amylase Isoforms from Azuki Bean, Vigna angularis, Showing Different Affinity towards β-Cyclodextrin"Biosci.Biotechnol.Biochem.. 67(印刷中). (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] B.Svensson: "Carbohydrate Bioengineering -(Gluco)amylases what have we lern so far?-"The Royal Society of Chemistry. 9 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] A. Kimura: "Molecular Anatomy of α-Glucosidase"Trends In Glycosci. Glycotechnol.. 12-68. 373-380 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Takayanagi: "Evidence for A Single Active Site on Isomalto-dextranase with Hydrolysis Activities of α-1, 6-and α-1, 4-Glucosidic Linkages"J. Appl. Glycosci. 48-1. 55-61 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M. Okuyama: "Carboxyl Group of Asp-647Residues as Possible Proton Donor in Catalytic Reaction of α-Glucosidase from Schizosaccharomyces pombe"Eur. J. Biochem.. 268-8. 2270-2280 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M. Nishimoto: "Purification and Substrate Specificity of Honeybee, Apis mellifera L. , α-Glucosidase III"Biosci. Biotechnol. Biochem.. 65-7. 1610-1616 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Mizumo: "Isolation and Sequence of Puntative α-Glucosidase Gene from Brevibacterium fuscum var. dextranlyticum Strain 0407"J. Appl. Glycosci.. 48-3. 287-291 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A. Kimura: "Reaction Mechanism of Glycosylase"Trends In Glycosci. Glycotechnol.. 13- (Supplement, SA-B01J). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] J. -H. Lee: "Purification and Identification of Essential Ionizable Groups of Honeybee, Apis mellifera L. , Trehalase"Biosci. Biotechnol. Biochem.. 65-12. 2657-2665 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. -M. Kim: "Production of Maltopentaose and Biochemical Characterization of Maltopentaose-Forming Amylase"J. Microbiol. Biotechnol.. 11-4. 636-643 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y. -M. Kim: "Isolation of Bacillus sp. Air-5 Producing Maltopentaose Forming Amylase and Optimization of Maltopentaose Production"Kor. J. Biotechnol. Bioeng.. 16-3. 246-252 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H. Mori: "Modulation of Activity and Substrate Binding Modes by Mutation of Single and Double Subsites+1/+2 and -5/-6 of Barley α-Amylase 1"Eur. J. Biochem.. 268. 6545-6558 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] B. Svensson: "(Gluco)amylases what have we lern so far?"Carbohydrate Bioengineering, The Royal Society of Chemistry. 67-75 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M. Nishimoto: "Study on Three α-Glucosidase Isozymes from Honeybee, Apis mellifera L."J. Appl. Glycosci.. 49-2. 191-197 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M. Okuyama: "Catalytic Amino Acid Residue Providing Proton Donar in α-Glucosidase Family II"J. Appl. Glycosci.. 49-2. 211-219 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M. Okuyama: "α-Glucosidase Mutant Catalyzes α-Glucosynthase-type Reaction"Biosci. Biotechnol. Biochem. 66-4. 928-933 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Takayanagi: "Evaluation of Subsite Affinities of Isomalto-dextranase from Arthrobacter globiformis"J. Appl. Glycosci.. 49-2. 123-127 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K. Fukuda: "Kinetic Studies on Substrate Specificity and Active Site of β-D-Glucosidase F1 from Streptomyces sp."J. Appl. Glycosci.. 49-3. 265-272 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K. Fukuda: "Identification of Essential Ionizable Groups and Evaluation of Subsite Affinities in the Active Site of β-D-Glucosidase F1 from Streptomyces sp."Biosci. Biotechnol. Biochem. 66-10. 2060-2067 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T. Nishio: "Glycon Specificity Profiling of α-Glucosidase Using Monodeoxy and Mono-O-methyl Derivatives of p-Nitrophenyl α-D-Glucopyranoside"Carbohydr. Res.. 337. 629-634 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H. Mori: "Barley α-Amylase Met53 Situated at the High-affinity Subsite-2 Belongs to a Substrate Binding Motif in the α→βLoop 2 of the Catalytic(β/α)8-Barrel and Is Critical for Activity and Substrate Specificity"Eur. J. Biochem. 269-22. 5377-5390 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] B. Svensson: "Fascinating Facets of Function and Structure of Amylolytic Enzymes of Glycoside Hydrolase Family 13"Biologia. 57-Suppl 11. 5-19 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M. Son: "Evidence of Intramolecular Transglucosylation Catalyzed by an α-Glucosidase"J. Appl. Glycosci.. 50-1. 41-44 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] San San Mar: "Purification, Characterization, and Sequence Analysis of Two α-Amylase Isoforms from Azuki Bean, Vigna angularis, Showing Different Affinity towards β-Cyclodextrin"Biosci. Biotechnol. Biochem.. 67. in press (2003)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2004-04-14  

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