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2002 Fiscal Year Final Research Report Summary

Molecular Mechanisms of Radiation-Resistance in Deinococcus radiodurans

Research Project

Project/Area Number 12480152
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 環境影響評価(含放射線生物学)
Research InstitutionTohoku University

Principal Investigator

YAMAMOTO Kazuo  Graduate School of Life Science, Professor, 大学院・生命科学研究科, 教授 (20093536)

Co-Investigator(Kenkyū-buntansha) 鳴海 一成  日本原子力研究所, イオンビーム生物応用研究部・バイオ技術研究室, 副主任研究員
ISSAY Narumi  Takasaki Radiation Chemistry Research Establishment, Japan Atomic Energy Research Institute, Principal Investigator
Project Period (FY) 2000 – 2002
KeywordsDeinococcus radiodurans / double strand DNA break / DNA damage repair / adaptation / radiation resistance / genome structure / 5-fluorouracil-resistant / genome instability
Research Abstract

Deinococcus radiodurans is a Gram-positive, red-pigmented, nonmotile bacterium that was originally identified as a contaminant of irradiated canned meat at 1957. It has been isolated worldwide from locations rich in organic nutrients such as animal feces and processed meat. D.radiodurans is an extremely resistant to a number of agents and conditions that damage DNA, including ionizing and ultraviolet radiation and hydrogen peroxide. When an exponential-phase culture of D. radiodurans is exposed to 6000 Gy x-rays, more than 200 double-strand breads (DSB) are introduced into the chromosome. The DSBs are not only repaired without loss of viability, but the chromosome is also apparently resembled so that the linear continuity of the genomes is unaffected by either the damage or the repair process. The capacity of D. radioudurans to survive.
DNA damage suggests that 1)they have the ability to potentiate the effectiveness of the conventional complement of DNA repair proteins, or that 2)they employ repair mechanisms that are fundamentally different from other prokaryotes. Our results indicate that 1)there are at least four identical copies of chromosome per cell, 2)they have not only Escherichia coli homologs for DNA repair, such as the recA, lexA and uvrA, but also several of DNA repair genes which have not been identified, 3)they can restore DNA structure from 200 or more DSBs within 4 hours, and for the processes, recA and unknown genes are involved, and that 4)recA deficient strains have a mutator phenotype if 5-fluorouracil-resistant mutation is monitored, suggesting the role of genome instability.

  • Research Products

    (40 results)

All Other

All Publications (40 results)

  • [Publications] Kazumi Mashimo: "Roles of the RecJ and RecQ proteins in spontaneous formation of deletion mutations in the Escherichia coli K-12 endogenous tonB gene"Mutagenesis. (in press). (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tokuhisa Hirouchi: "Class II DNA photolyase gene from Oryza sativa ; Cloning the cDNA by dilution-amplification"Molecular Genetics and Genomics. (in press). (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yuki Nagata: "X-ray-induced mutations in Escherichia coli K-12 strains with altered DNA-polymerase I activities"Mutation Research. (in press). (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Masaki Hori: "Identification of high excision capacity for 5-hydroxymethyluracil mispaired with guanine in DNA of Escherichia coli MutM, Nei and Nth DNA glycosylases"Nucleic Acids Research. 31. 1191-1196 (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Katsuya Satoh: "Characterization of RecA424 and RecA670 proteins from Deinococcus radiodurans"J. Biochemistry. 131. 121-129 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yuki Nagata: "The roles of Klenow processing and flap processing activities of DNA polymerase I in chromosome instability in Escherichia coli K12 strains"Genetics. 160. 13-23 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hiroaki Terato: "Novel repair activities of AlKA(3-methyladenine DNA glycosylase II) and Endonuclease VIII for xanthine and oxanine, guanine lesions induced by nitric oxide and nitrous acid"Nucleic Acids Research. 30. 4975-4984 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Eiji Yamamura: "Characterization of spontaneous mutation in the soxRS strain of Escherichia coli"Journal of Radiation Research. 43. 195-203 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tatsuo Nunoshiba: "Mutagenic target for hydroxyl radicals generated in Escherichia coli mutant deficient in Mn-and Fe-superoxide dismutases and Fur, a repressor for iron-uptake systems"DNA Repair. 1. 411-418 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Masashi Tanaka: "Effect of photoreactivation for cyclobutane pyrimidine dimers and pyrimidine (6-4) pyrimidone photoproducts on ultraviolet mutagenesis in SOS-induced Escherichia coli"Mutagenesis. 16. 1-6 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Takashi Watanabe: "Miscoding and misincorporation of 8-oxo-guanine during leading and lagging strand synthesis in Escherichia coli"Molecular and General Genetics. 264. 836-841 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Takashi Watanabe: "An in vivo approach to identifying sequence context of 8-oxoguanine mutagenesis"Biochem Biophys Res Commun. 284. 179-184 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kazuhiro Kiyosawa: "Amplified UvrA protein can ameliorate the ultraviolet sensitivity of an Escherichia coli recA mutant"Mutation Res. DNA Repair. 487. 149-156 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kohei Ueno: "Trehalose sensitivity in Drosophila correlates with mutations in and expression of the gustatory receptor gene Gr5a"Current Biology. 11. 1451-1455 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Issay Narumi: "The LexA protein from Deinococcus radiodurans is not involved in RecA induction following γ-ray irradiation"Journal of Bacteriol. 183. 6951-6956 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tanbir Najrana: "Spontaneous and osmium tetroxide induced mutagenesis in Escherichia coli strain deficient both endonuclease III and endonuclease VIII"Mutagenesis. 15. 121-125 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tetsuya Ono: "Age-associated increase of spontaneous mutation frequency and molecular nature or mutation in newborn and old lacZ-transgenic mouse"Mutation Research. 447. 165-177 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shingo Nakamura: "Radiation-induced mutation in spleen and brain of lacZ transgenic mouse"Int J Radiation Biology. 76. 431-440 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Eiji Yamamura: "Characterization of spontaneous mutation in the oxyR strain of Escherichia coli"Biochem Biophys Res Commun. 279. 427-432 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 山本和生: "放射線抵抗性細菌デイノコックス・ラジオデュランス"遺伝. 54. 9-10 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mashimo,K, Kawata,M. and Yamamoto,K: "Roles of the RecJ and RecQ proteins in spontaneous formation of deletion mutations in the Escherichia coli K-12 endogenous tonB gene"Mutagenesis. in press. (2003)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hirouchi,T., Nakajima,S., Najrana,T., Tanaka,M., Matsunaga,T., Hidema,J., Teranishi,M., Fujino ,T., Kumagai,T. and Yamamoto,K: "Class II DNA photolyase gene from Oryza sativa; Cloning the cDNA by dilution-amplification"Molecular and General Genetics. in press. (2003)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nagata,Y., Kawata,M., Komura,J.,Ono, T. and Yamamoto,K: "X-ray-induced mutations in Escherichia coli K-12 strains with altered DNA polymerase I activities"Mutation Research. in press. (2003)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hori,M., Yonei,S., Sugiyama,H., Kino,K., Yamamoto,K. and Zhang,Q.-M: "Identification of high excision capacity for 5-hydroxymethyluracil mispaired with guanine in DNA of Escherichia coli MutM, Nei and Nth DNA glycosylases"Nucleic Acids Research. 31. 1191-1196 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nagata,Y., Mashimo,K., Kawata,M. and Yamamoto,K: "The roles of Klenow processing and flap processing activities of DNA polymerase I in chromosome instability in Escherichia coli K12 strains"Genetics. 160. 13-23 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nunoshiba,T., Watanabe,T., Nakabeppu,Y. and Yamamoto,K: "Mutagenic target for hydroxyl radicals generated in Esherichia coli mutant deficient in Mn-and Fe-superoxide dismutases and Fur, a repressor for iron-uptake systems"DNA Repair. 1. 411-418 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yamamura,E., Uematsu,N., Nunoshiba,T., Kawata,M. and Yamamoto,K: "Characterization of spontaneous mutation in the soxRS strain of Escherichia coli"J.Radiat.Res.. 43. 195-203 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Tu, Z-L., Kobayashi,Y., Kiguchi,K., Watanabe,H. and Kazuo Yamamoto,K: "Effects of local irradiation with heavy ions on hemopoietic function of silkworm Bombyx mori"J.Radiat.Res.. 43. 269-275 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Terato,H., Masaoka,A., Asagoshi,K., Honsho,A., Ohyama,Y., Suzuki,T., Yamada,M., Makino,K., Yamamoto,K. and Ide,H: "Novel repair activities of AlkA (3-methyladenine DNA glycosylase II) and Endonuclease VIII for xanthine and oxanine, guanine lesions induced by nitric oxide and nitrous acid"Nucleic Acids Res.. 30. 4975-4984 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Satoh,K., Narumi,I., Kikuchi,M., Kitayama,S., Yanagisawa,T., Yamamoto,K. and Watanabe,H: "Characterization of RecA424 and RecA670 proteins from Deinococcus radiodurans"J.Biochemistry. 131. 121-129 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Tanaka,M., Nakajima,S., Ihara,M., Matsunaga,T., Nikaido,O. and Yamamoto,K: "Effect of photoreactivation for cyclobutane pyrimidine dimers and pyrimidine (6-4) pyrimidone photoproducts on ultraviolet mutagenesis in SOS-induced Escherichi coli"Mutagenesis. 16. 1-6 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Watanabe,T.,van Geldorp,G., Najrana,T., Yamamura,E., Nunoshiba,T. and Yamamoto,K: "Miscoding and misincorporation of 8-oxo-guanine during leading and lagging strand synthesis in Escherichia coli"Mol.Gen.Genet. 264. 836-841 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Watanabe,T., Nunoshiba,T., Kawata,M. and Yamamoto,K.: "An in vivo approach to identifying sequence context of 8-oxoguanine mutagenesis"Biochem. Biophys. Res. Commun.. 284. 179-184 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ueno,K., Ohta,M., Morita,H., Mikuni,Y., Nakajima,S., Yamamoto,K. and Isono K: "Trehalose sensitivity in Drosophila correlates with mutations in and expression of the gustatory receptor gene Gr5a"Current Biology. 11. 1451-1455 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Narumi,I., Satoh,K., Kikuchi,M., Funayama,T., Yanagisawa,T., Kobayashi,Y., Watanabe,H. and Yamamoto,K: "The LexA protein from Deinococcus radiodurans is not involved in RecA induction following γ-ray irradiation"J.Bacteriol. 183. 6951-6956 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kiyosawa,K., Tanaka,M., Matsunaga,T., Nikaido,O. and Yamamoto,K: "Amplified UvrA protein can ameliorate the ultraviolet sensitivity of an Escherichia coli recA mutant"Mutation Res.DNA Repair. 487. 149-156 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nijrana,T., Saito,Y., Uraki,F., Kubo,K. and Yamamoto,K: "Spontaneous and osmium tetroxide induced mutagenesis in Escherichia coli strain deficient both endonuclease III and endonuclease VIII"Mutagenesis. 15. 121-125 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ono,T., Ikehata,H., Nakamura,S., Saito,Y., Hosoi,Y., Takai,Y., Yamada,S., Onodera,J. and Yamamoto,K: "Age-associated increase of spontaneous mutation frequency and molecular nature of mutation in newborn and old lacZ-transgenic mouse"Mutation Res.. 447. 165-177 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nakamura,S., Ikehata,H., Komura,J., Hosoi,Y., Inoue,H., Gondo,Y., Yamamoto,K., Ichimasa,Y. and Ono,T: "Radiation-induced mutation in spleen and brain of lacZ transgenic mouse"Int.J Radiat Biol. 76. 431-440 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yamamura,E., Nunoshiba,T., Kawata,M. and Yamamoto,K.: "Characterization of spontaneous mutation in the oxyR strain of Escherichia coli"Biochem.Biophys.Res.Commun.. 279. 427-432 (2000)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2004-04-14  

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