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2003 Fiscal Year Final Research Report Summary

Structural study of membrane proteins (GPCR and channels) regulating signal transduction.

Research Project

Project/Area Number 13001003
Research Category

Grant-in-Aid for Specially Promoted Research

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

FUJIYOSHI Yoshinori  Kyoto University, Graduate School of Science, Professor, 大学院・理学研究科, 教授 (80142298)

Co-Investigator(Kenkyū-buntansha) SATO Chikara  National Institute of Advanced Industrial Science and Technology, Structure Physiology Group, Chief Scientist, 構造生理研究グループ, 主任研究員
DOI Tomoko  JEOL. Ltd., Basic Research department, Chief Scientist, 基礎研究部, 主任研究員
MIYAZAWA Atsuo  Kyoto University, RIKEN Harima Institute, Bio-multisome Research Team, Team Leader, 生体マルチソーム研究チーム, 連携研究員 (60247252)
Project Period (FY) 2001 – 2003
KeywordsElectron crystallography / Cryo-electron microscope / Single particle analysis / Two-dimensional crystal / Membrane proteins / Water channel / Acetylcholine receptor / Gating mechanism
Research Abstract

The following research results were achieved in three years by support of Glant-in Aid for Specially promoted Research from 2001. 1)Structure of water channel, AQP4, was analyzed by over expression technique of Sf9 cells as well as electron crystallography. Based on the structure we could elucidate mechanisms of orthogonal array formation and cell adhesion of the water channel molecules. 2)Structure and gating mechanism of the acetylcholine receptor pore were analyzed by cryo-electron microscopy (J.Mol.Biol., 319, 1165-1176 (2002), Nature, 423, 949-955 (2003)). 3)A new computer program for automatic particle pickup method of single particle analysis, by which structure of voltage-sensitive sodium channel was analyzed (Nature, 409, 1047-1051 (2001)), was developed (J.Struct.Biol., 136, 227-238 (2001)) and enabled us to analyze structure of IP_3 receptor (J.Mol.Biol., 336, 155-164 (2004)). 4)Structure of Homer was analyzed by X-ray crystallography (J.Mol.Biol., 318, 1117-1126 (2002)), and we developed a new Co-localization Expression Technique (Co-LET) for purification of membrane proteins without detergents (BBRC, 295, 756-765 (2002)). 5)We studied interaction of endothelin B receptor with caveoline-1 (Eur.J.Biochem., 270, 1816-1827 (2003)). Structure of rhodopsin was analyzed at 2.6 Å (Proc.Natl.Acad.Sci.USA, 99, 5982-5987 (2002)). The mutations of three residues in connexin26 were studied to obtain the structural insights of the molecule (J.Boil.Chem., 278, 1807-1816 (2003)). The importance of the second PDZ domain for clustering of PSD-95 was revealed (J.Biol.Chem., 277, 3640-3646 (2002)).

  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] Fumiaki Imamura: "Ligand Binding of the Second PDZ Domain Regulated Clustering of PSD-95 with the Kvl.4 Potassium Channel."Journal of Biological Chemistry. 277. 3640-3646 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tetsuji Okada: "Functional role of internal water molecules in rhodopsin revealed by x-ray crystallography."Proceeding of the National Academy of the United States of America. 99. 5982-5987 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Katsumasa Irie: "Crystal Structure of the Homer 1 Family Conserved Region Reveals the Interaction Between the EVH1 Domain and Own Proline-rich Motif."Journal of Molecular Biology. 318. 1117-1126 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nigel Unwin: "Activation of the Nicotinic Acetylcholine Receptor Involves a Switch in Conformation of the α Subunits."Journal of Molecular Biology. 319. 1165-1176 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yoko Hiroaki: "A new technique to co-localise membrane proteins with Homer/vesl."Biochemical and Biophysical Research Communications. 295. 756-765 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Atsunori Oshima: "Roles of Met-34, Cys-64, and Arg-75 in the Assembly of Human Connexin 26."Journal of Biological Chemistry. 278. 1807-1816 (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tomohiro Yamaguchi: "Regulated interaction of endothelin B receptor with caveolin-1."European Journal of Biochemistry. 270. 1816-1827 (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Atsuo Miyazawa: "Structure and gating mechanism of the acetylcholine receptor pore."Nature. 423. 949-955 (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Chikara Sato: "Inositol 1,4,5-trisphosphate Receptor Contains Multiple Cavities and L-shaped Ligand-binding Domains."Journal of Molecular Biology. 336. 155-164 (2004)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nobuhiko Gyobu: "Improved specimen preparation for cryo-electron microscopy using a symmetric carbon sandwich technique."Journal of Structural Biology. 146. 325-333 (2004)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Henning Stahlberg: "Two-dimensional crystals : a powerful approach to assess structure, function and dynamics of membrane proteins."FEBS Letters. 504. 166-172 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Peter Agre: "Aquaporin water channels - from atomic structure to clinical medicine."Journal of physiology. 542. 3-16 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yoshinori Fujiyoshi: "Structure and Function of Water Channels."Current Opinion in Structural Biology. 12. 509-515 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yoshimasa Kyogoku: "Structural Genomics of Membrane Proteins."Accounts of Chemical Research. 36. 199-206 (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fumiaki Imamura et al.: "Ligand Binding of the Second PDZ Domain Regulates Clustering of PSD-95 with the Kvl.4 Potassium Channel."Journal of Biological Chemistry. 277. 3640-3646 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Tetsuji Okada et al.: "Functional role of internal water molecules in rhodopsin revealed by x-ray crystallography."Proceeding of the National Academy of the United States of America. 99. 5982-5987 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Katsumasa Irie at al.: "Crystal Structure of the Homer 1 Family Conserved Region Reveals the Interaction Between the EVH1 Domain and Own Proline-rich Motif."Journal of Molecular Biology. 318. 1117-1126 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nigel Unwin et al.: "Activation of the Nicotinic Acetylcholine Receptor Involves a Switch in Conformation of the α Subunits."Journal of Molecular Biology. 319. 1165-1176 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yoko Hiroaki et al.: "A new technique to co-localise membrane proteins with Homer/vesl."Biochemical and Biophysical Research Communications. 295. 756-765 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Atsunori Oshima et al.: "Roles of Met-34, Cys-64, and Arg-75 in the Assembly of Human Connexin 26."Journal of Biological Chemistry. 278. 1807-1816 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Tomohiro Yamaguchi et al.: "Regulated interaction of endothelin B receptor with caveolin-1."European Journal of Biochemistry. 270. 1816-1827 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Atsuo Miyazawa et al.: "Structure and gating mechanism of the acetylcholine receptor pore."Nature. 423. 949-955 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Chikara Sato et al.: "Inositol 1,4,5-trisphosphate Receptor Contains Multiple Cavities and L-shaped Ligand-binding Domains."Journal of Molecular Biology. 336. 155-164 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nobuhiko Gyobu et al.: "Improved specimen preparation for cryo-electron microscopy using a symmetric carbon sandwich technique."Journal of Structural Biology. 146. 325-333 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Henning Stahlberg et al.: "Two-dimensional crystals : a powerful approach to assess structure, function and dynamics of membrane proteins."FEBS Letters. 504. 166-172 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Peter Agre et al.: "Aquaporin water channels -from atomic structure to clinical medicine."Journal of Physiology. 542. 3-16 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yoshinori Fujiyoshi et al.: "Structure and Function of Water Channels."Current Opinion in Structural Biology. 12. 509-515 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yoshimasa Kyogoku et al.: "Structural Genomics of Membrane Proteins."Accounts of Chemical Research. 36. 199-206 (2003)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2005-04-19  

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