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2004 Fiscal Year Annual Research Report

修飾DNAの機能化による分子デバイス

Research Project

Project/Area Number 13305058
Research InstitutionOsaka University

Principal Investigator

真嶋 哲朗  大阪大学, 産業科学研究所, 教授 (00165698)

Co-Investigator(Kenkyū-buntansha) 藤塚 守  大阪大学, 産業科学研究所, 助教授 (40282040)
佐治 幸子  大阪大学, 産業科学研究所, 助手 (50197844)
川井 清彦  大阪大学, 産業科学研究所, 助手 (50314422)
遠藤 政幸  大阪大学, 産業科学研究所, 助手 (70335389)
KeywordsDNA / DNA分子ワイヤ / 修飾DNA / DNAの機能化 / 分子デバイス / 核酸塩基 / ホール移動 / パルスラジオリシス
Research Abstract

ナノサイエンス、ナノテクノロジーとの関係からDNA分子デバイスの創製は、学問的のみならず社会的要請の強い研究課題となっている。本研究では、種々の光機能性クロモファを共有結合によって導入した修飾DNAを用いることによって、クロモファ独自の光機能性を利用して修飾DNAに様々な機能性を賦与し、その機能を自由にコントロールすることによって、光機能化修飾DNAの特に生体系での分子デバイスとしての可能性を明らかにする。DNA内に位置特異的かつ高効率にホールを注入する方法として、A-hoppingを経由する光誘起電荷分離過程を利用した。電子アクセプターとしてnaphthalimide(NI)を、電子ドナーとしてphenothiazine(PTZ)を修飾した2本鎖DNAを合成し、NIの光励起により連続A-hoppingを経由した電荷分離反応に利用して、ODNのNIに最も近い塩基にホールを注入した。NI部位の光励起により、照射直後に400nm付近にNI^<・->の吸収が観測され、その後500nm付近にPTZ^<・+>に帰属される吸収の立ち上がりが観測された。このスペクトル経時変化は、光励起によりDNA内にホールが注入され、その後PTZへと移動していることを示し、DNA内に生じたホールが100ÅにわたりDNA内を移動する過程に対応している。そこで、電荷移動過程におけるDNA配列、距離およびミスマッチ塩基対の影響に関する検討を行った。NI-A_6(GA)_<12->PTZおよびNI-A_6(GT)_<12>-PTZの配列において、ホール移動速度は1.6および83・sであった。また、DNAの中央付近にGTおよびGAミスマッチ配列を導入したところ、劇的な速度の低下が観測された。これにより、DNA内長距離ホール移動が、最も酸化電位の低いG間のホッピングにより進行すること、およびその速度が配列、ミスマッチ(SNP)に大きく影響を受けることを明確に示した。本手法によって、定められた長さのDNAの塩基配列を速度で評価することが可能となり、電荷移動速度測定によるDNA配列情報の読み出しが可能となる。

  • Research Products

    (55 results)

All 2005 2004

All Journal Article (52 results) Book (3 results)

  • [Journal Article] Fast Exciton Migration in Porphyrin-Functionalized Polypeptides2005

    • Author(s)
      Mamoru Fujitsuka
    • Journal Title

      J.Phys.Chem.B(Commun.) 109(1)

      Pages: 33-35

  • [Journal Article] Inhibition of the formation and decay of core-stilbene radical cations by the dendron-phenoxyl groups during the photoinduced electron transfer2005

    • Author(s)
      Michihiro Hara
    • Journal Title

      J.Phys.Chem.B 109(2)

      Pages: 973-976

  • [Journal Article] Hofmeister Effects on the Electron Transfer Reactions of 1 -Pyrenesulfonic Acid Radical Cation with Nucleophilic Anions in Nafion Membrane2005

    • Author(s)
      Takashi Tachikawa
    • Journal Title

      J.Phys.Chem.B 109(8)

      Pages: 3381-3386

  • [Journal Article] Remarkable Reactivities of Xanthone Ketyl Radicals in the Excited State Compared with that in the Ground State2005

    • Author(s)
      Masanori Sakamoto
    • Journal Title

      J.Phys.Chem.A (in press)

  • [Journal Article] Reaction of Triaryiphosphine Radical Cations Generated from Photo-Induced Electron Transfer in the Presence of Oxygen2005

    • Author(s)
      Shinro Yasui
    • Journal Title

      J.Org.Chem 70(4)

      Pages: 1276-1280

  • [Journal Article] Dihydrophenanthrene-type Intermediates during Photoreaction of trans-4'-Benzyl-5-styrylfuran2005

    • Author(s)
      Shingo Samori
    • Journal Title

      J.Org.Chem. (in press)

  • [Journal Article] Selective guanine oxidation by UVB-irradiation in telomeric DNA2005

    • Author(s)
      Kiyohiko Kawai
    • Journal Title

      Chem.Comm. (in press)

  • [Journal Article] Photonsitized one-electron oxidation of DNA2005

    • Author(s)
      Kiyohiko Kawai
    • Journal Title

      Pure Appl. (in press)

  • [Journal Article] Contribution of the Distance-Dpendent Reorganization Energy and Proton Transfer Process to Hole Transfer in DNA2005

    • Author(s)
      Tadao Takada
    • Journal Title

      Chem.Eur.J. (in press)

  • [Journal Article] Anomalous emitting property of azaxanthone ketylradical in the excited state2005

    • Author(s)
      Masanori Sakamoto
    • Journal Title

      J.Am.Chem.Soc.(Commun.) (in press)

  • [Journal Article] Formation of Highly Stabilized Intramolecular Dimer Radical Cation and π-Complex of [3_n]Cyclophanes (n=3,5,6) during Pulse Radiolysis2005

    • Author(s)
      Mamoru Fujitsuka
    • Journal Title

      J.Phys.Chem. (in press)

  • [Journal Article] Direct Observation of Hole Transfer through double helical DNA over 100 Å2004

    • Author(s)
      Tadao Takada
    • Journal Title

      Proc.Nat.Acad.Sci.USA 101

      Pages: 14002-14006

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Rate constant measurement of bimolecular triplet energy transfer from chrysene in the higher triplet excited states2004

    • Author(s)
      Xichen Cai
    • Journal Title

      J.Phys.Chem.A 108,35

      Pages: 7147-7150

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Rapid Exciton Migration and Fluorescent Energy Transfer in Helical Polyisocyanides with Regularly Arranged Porphyrin Pendantss2004

    • Author(s)
      Mamoru Fujitsuka
    • Journal Title

      J.Phys.Chem.B 108,32

      Pages: 11935-11941

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Photocatalytic One-electron Oxidation of Biphenyl Derivatives Strongly Coupled with TiO_2 Surface2004

    • Author(s)
      Takashi Tachikawa
    • Journal Title

      Langmuir 20,7

      Pages: 2753-2759

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Structural Arrangement of Two DNA Double Helixes Using Cross-Linked Oligonucleotide Connectors2004

    • Author(s)
      Masayuki Endo
    • Journal Title

      Chem.Commun.

      Pages: 1308-1309

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Fluorescence Properties of 2-Aminopurine in Human Telomeric DNA2004

    • Author(s)
      Takumi Kimura
    • Journal Title

      Chem.Commun.

      Pages: 1438-1439

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Oxidation processes of aromatic sulfides by hydroxyl radicals in colloidal solution of TiO_2 during pulse radiolysis2004

    • Author(s)
      Sachiko Tojo
    • Journal Title

      Chem.Phys.Lett. 384,4-6

      Pages: 312-316

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Inhibition of one-electron oxidation of 1-pyrenesulfonate included in cyclodextrin by sulfate radical anion2004

    • Author(s)
      Michihiro Hara
    • Journal Title

      Chem.Phys.Lett. 387,4-6

      Pages: 283-286

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Relationship between Formation Yield of Radical Cation and Laser Intensity during Resonant Two-Photon Ionization of Substituted Stilbenes Using a 25-ns XeCl Excimer Laser2004

    • Author(s)
      Michihiro Hara
    • Journal Title

      Chem.Phys.Lett. 393

      Pages: 338-342

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Formation Efficiency of Radical Cations of Stilbene and Methoxy-substituted Stilbenes during Resonant Two-Photon Ionization with a XeCl Excimer Laser2004

    • Author(s)
      Michihiro Hara
    • Journal Title

      J.Photochem.Photobiol.A 162,1

      Pages: 121-128

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Photochemistry of Halogenated Anilines Studied by Time-variation of Micro-wave Dielectric Absorption2004

    • Author(s)
      Michihiro Hara
    • Journal Title

      J.Photochem.Photobiol.A 163,1-2

      Pages: 153-158

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Direct observation of oxidation processes of aromatic sulfides in TiO_2 colloidal solution by laser flash photolysis2004

    • Author(s)
      Sachiko Tojo
    • Journal Title

      Phys.Chem.Chem.Phys. 6,5

      Pages: 960-964

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Quenching Processes of Aromatic Hydrocarbons in the Higher Triplet Excited States -Energy Transfer vs Electron Transfer2004

    • Author(s)
      Xichen Cai
    • Journal Title

      Phys.Chem.Chem.Phys. 6

      Pages: 1735-1741

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Formation and Decay of Pyrene Radical Cation and Pyrene Dimer Radical Cation in the Absence and Presence of Cyclodexitrins during Resonant Two-Photon Ionization of Pyrene and Sodium 1-Pyrene Sulfonate2004

    • Author(s)
      Michihiro Hara
    • Journal Title

      Phys.Chem.Chem.Phys. 6

      Pages: 3215-3220

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Formation of dimer radical cation of 1,1-dianisylethylene through two-step hole transfer processes during TiO_2 photocatalytic reactions2004

    • Author(s)
      Takashi Tachikawa
    • Journal Title

      Tetrahedron Lett. 45,19

      Pages: 3753-3756

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Evaluation of the Efficiency of the Photocatalytic One-Electron Oxidation Reaction of Aromatic Compounds Adsorbed on TiO_2 Surface2004

    • Author(s)
      Takashi Tachikawa
    • Journal Title

      Chem.Eur.J. 10

      Pages: 5345-5353

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Charge Separation in DNA via Consecutive Adenine Hoppings2004

    • Author(s)
      Tadao Takada
    • Journal Title

      J.Am.Chem.Soc. 126;4

      Pages: 1125-1129

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Stepwise Photocleavage of Two C-O Bonds of 1,8-Bis[(4-benzoylphenoxy)-methyl]naphalene with Three-Step Excitation Using Three-Color, Three-Laser Flash Photolysis2004

    • Author(s)
      Xichen Cai
    • Journal Title

      J.Am.Chem.Soc.(Commun.) 126

      Pages: 7432-7433

  • [Journal Article] Intermolecular Electron Transfer from Naphthalene Derivatives in the Higher Triplet Excited States2004

    • Author(s)
      Masanori Sakamoto
    • Journal Title

      J.Am.Chem.Soc. 126;31

      Pages: 9709-9714

  • [Journal Article] Effects of benzyl-ether type dendrons as hole-harvesting and shielding for the neutralization of stilbene core radical cations with chloride ion during two-photon ionization of stilbene dendrimers having the stilbene core and benzyl-ether type dendrons2004

    • Author(s)
      Michihiro Hara
    • Journal Title

      J.Am.Chem.Soc. 126(43)

      Pages: 14217-14223

  • [Journal Article] Lifetime Regulation of Charge-Separated Sate in DNA by Modulating the Oxidation Potential of Guanine in DNA through Hydrogen Bonding2004

    • Author(s)
      Kiyohiko Kawai
    • Journal Title

      J.Am.Chem.Soc. 126(40)

      Pages: 12843-12846

  • [Journal Article] Transient Absorption Spectra and Lifetimes of Benzophenone Ketyl Radicals in the Excited State2004

    • Author(s)
      Masanori Sakamoto
    • Journal Title

      J.Phys.Chem.A(Commun.) 108,40

      Pages: 8147-8150

  • [Journal Article] Transient phenomena of polyphenyls in the higher triplet excited states2004

    • Author(s)
      Xichen Cai
    • Journal Title

      J.Phys.Chem.A 108(43)

      Pages: 9361-9364

  • [Journal Article] Competitive Marcus-Type Electron Transfer and Energy Transfer from the Higher TripletExcited State2004

    • Author(s)
      Masanori Sakamoto
    • Journal Title

      J.Phys.Chem.A 108(50)

      Pages: 10941-10948

  • [Journal Article] Effects of interaction of photosensitizer with DNA and stacked G bases on photosensitized one-electron oxidation of DNA2004

    • Author(s)
      Tadao Takada
    • Journal Title

      J.Phys.Chem.B 108;2

      Pages: 761-766

  • [Journal Article] Influence Adsorption on TiO_2 Photocatalytic One-electron Oxidation Kinetics of Aromatic Sulfides Studied by Time-resolved Diffuse Reflectance Spectroscopy2004

    • Author(s)
      Takashi Tachikawa
    • Journal Title

      J.Phys.Chem.B 108(19)

      Pages: 5859-5866

  • [Journal Article] Influence of Metal ion on the Charge Recombination Processes during TiO_2 Photocatalytic One-Electron Oxidation Reactions2004

    • Author(s)
      Takashi Tachibana
    • Journal Title

      J.Phys.Chem.B 108,30

      Pages: 11054-11061

  • [Journal Article] Formation of Pyrene Dimer Radical Cation at the Internal Site of Oligodeoxynucleotides2004

    • Author(s)
      Kiyohiko Kawai
    • Journal Title

      J.Phys.Chem.B 108,35

      Pages: 13547-13550

  • [Journal Article] Higher Triplet Excited State of Oligophenylenes by Two-color Two-laser Flash Photolysis2004

    • Author(s)
      Yosuke Oseki
    • Journal Title

      J.Phys.Chem.B 108(43)

      Pages: 16727-16731

  • [Journal Article] Photocatalytic Oxidation Reactivity of Holes in the Sulfur- and Carbon-doped TiO_2 Powders Studied by Time-Resolved Diffuse Reflectance Spectroscopy2004

    • Author(s)
      Takashi Tachikawa
    • Journal Title

      J.Phys.Chem.B 108(50)

      Pages: 19299-19306

  • [Journal Article] Formation of Dimer Radical Cation of Aromatic Sulfides on the TiO_2 Surface during Photocatalytic Reactions2004

    • Author(s)
      Takashi Tachikawa
    • Journal Title

      Langmuir(Commun.) 20

      Pages: 4327-4329

  • [Journal Article] Direct Observation of the One-Electron Reduction of Methyl Viologen Mediated by CO_2 Radical Anion during TiO_2 Photocatalytic Reactions2004

    • Author(s)
      Takashi Tachikawa
    • Journal Title

      Langmuir(Commun.) 20(22)

      Pages: 9441-9444

  • [Journal Article] One-electron Attachment Reaction of B- and Z-DNA Modified by 8-Bromo-2'-deoxyguanosine2004

    • Author(s)
      Takumi Kimura
    • Journal Title

      J.Org.Chem. 69(4)

      Pages: 1169-1173

  • [Journal Article] Manipulation of the Dimer Interface for Photochemical Regulation the Activity and Function of an Endonuclease BamHI2004

    • Author(s)
      Masayuki Endo
    • Journal Title

      J.Org.Chem. 69;13

      Pages: 4292-4298

  • [Journal Article] Two-color two-laser damaging DNA2004

    • Author(s)
      Kiyohiko Kawai
    • Journal Title

      Angew.Chem.Int.Ed.Eng 116,18

      Pages: 2460-2463

  • [Journal Article] Design and Synthesis of Photochemically Controllable Caspase-32004

    • Author(s)
      Masayuki Endo
    • Journal Title

      Angew.Chem.Int.Ed.Eng 43(42)

      Pages: 5643-5645

  • [Journal Article] First Direct Observation of the Higher Triplet Excited State of Substituted Oligothiophenes by Two-color Two-laser Flash Photolysis2004

    • Author(s)
      Mamoru Fujitsuka
    • Journal Title

      ChemPhysChem 5

      Pages: 1240-1242

  • [Journal Article] Fluorescence properties of 2-Aminopurine-cytidine-7-deazaguanine (5'-ApCdzG-3') trimer in B- and Z-DNA2004

    • Author(s)
      Takumia Kimura
    • Journal Title

      Chem.Commun

      Pages: 268-269

  • [Journal Article] Photochemical regulation of the activity of an endonuclease BamHI-H using an azobenzene moiety incorporated site-selectively into the dimer interface2004

    • Author(s)
      Koji Nakayama
    • Journal Title

      Chem.Commun.

      Pages: 2386-2387

  • [Journal Article] Direct observation of the cascade hole transfer giving free radical cations of trans-stilbenes during TiO2 photocatalytic reactions2004

    • Author(s)
      Takashi Tachikawa
    • Journal Title

      Chem.Phys.Lett. 392,1-3

      Pages: 50-54

  • [Journal Article] Visualization of Fuel Vapor in Inter-Droplet Space by Excited-Molecular Fluorescence2004

    • Author(s)
      Yoshiteru Tanaka
    • Journal Title

      Koon Gakkaishi(J.High Temperature Society) 30,4

      Pages: 213-219

  • [Book] Spectroscopic Investigation of Oxidative Hole Transfer in DNA in Charge Transfer in DNA(ed by Hans-Achim Wagenknecht Topics in Current Chemistry )2005

    • Author(s)
      Kiyohiko Kawai, Tadao Takada, Tetsuro Majima
    • Publisher
      Springer-Verlag, Inc., Berlin(in press)
  • [Book] 酸化チタン光触媒による-電子酸化反応2005

    • Author(s)
      立川貴士, 真嶋哲朗
    • Publisher
      エヌ・ティー・エス(in press)
  • [Book] Hole Transfer through DNA by Monitoring the Transient Absorption of Radical Cations of Organic Molecules Conjugated to DNA in Long-Range Charge Transfer in DNA I(ed by G.B.Schuster)2004

    • Author(s)
      Kiyohiko Kawai, Tetsuro Majima
    • Total Pages
      117-137
    • Publisher
      Springer-Verlag, Inc., Berlin

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Published: 2006-07-12   Modified: 2016-04-21  

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