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2003 Fiscal Year Final Research Report Summary

Biocomplexity of the interactions of complex organic colloids and microbial communities in aquatic environments

Research Project

Project/Area Number 13308029
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Environmental dynamic analysis
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

NAGATA Toshi  Kyoto University, Center for Ecological Research, Professor, 生態学研究センター, 教授 (40183892)

Co-Investigator(Kenkyū-buntansha) KOIKE Isao  The University of Tokyo, Ocean Research Institute, Professor, 海洋研究所, 教授 (30107453)
KAWABATA Zenichiro  Kyoto University, Center for Ecological Research, Professor, 生態学研究センター, 教授 (80108456)
WADA Eitaro  Research Institute for Humanity and Nature, Professor, 教授 (40013578)
OGAWA Hiroshi  The University of Tokyo, Ocean Research Institute, Associate Professor, 海洋研究所, 助教授 (50260518)
KOGURE Kazuhiro  The University of Tokyo, Ocean Research Institute, Professor, 海洋研究所, 教授 (10161895)
Project Period (FY) 2001 – 2003
KeywordsDissolved organic matter / Marine colloids / Bacterial community / Organic matter degradation / Marine ecosystem / Biocomplexity / Microbial loop / Material cycling
Research Abstract

Dissolved and colloidal organic matter (DOM and COM) represents the largest reservoir of organic carbon in the oceans and play a substantial role in global cycling of carbon. In the present project, we were aimed at examining degradation of complex organic polymers in seawater and regulation mechanisms of bacterial communities in estuarine and coastal environments. We succeeded in developing a novel tracer technique to analyze transformation and degradation of complex organic polymers in seawater. Results showed that peptidoglycan, an important component of marine COM, is degraded more slowly than proteins, suggesting that complex polymers play a role in preservation of organic matter. Single-cell detection methods were used to investigate community dynamics and regulation of bacterial communities, which are responsible for degradation of DOM and COM. We found that bacterial community composition varies depending on substrate (DOM) supply, but the major flux of DOM and COM is generally driven by a limited number of bacterial groups such as alpha proteobacteria cluster. These results have implications for better modeling the biocomplex system consisting of DOC, COC and microbial communities.

  • Research Products

    (14 results)

All Other

All Publications (14 results)

  • [Publications] Nagata, T., Fukuda, R., Fukuda, H., Koike I.: "Basin-Scale Geographic Patterns of Bacteriaplankton Biomass and Production in the Subarctic Pacific, July-September 1997."Journal of Oceanography. 57(3). 301-313 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Koike, I., Ogawa, H., Nagata, T., Fukuda, R., Fukda, H: "Silicate to Nitrate Ratio of the Upper Sub-Arctic Pacific and the Bering Sea Basin in Summer : Its Implication for Phytoplankton Dynamics."Journal of Oceanography. 57(3). 253-260 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 永田 俊: "海洋における「溶存有機物-微生物連鎖系」研究の新しい展開"日本プランクトン学会報. 49(1). 15-20 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 永田 俊: "溶存有機物の連鎖系"月刊海洋 号外. 29. 120-125 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nagata, T., Meon, B., Kirchman, D.L.: "Microbial degradation of peptidoglycan in seawater"Limnology and Oceanography. 48. 745-754 (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yokokawa, T., T.Nagata, M.T.Cottrell, D.L.Kirchman: "Growth rate of the major phylogenetic bacterial groups in the Delaware"Limnology and Oceanography. (印刷中).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 永田 俊: "「ミクロ生態系への招待」大串隆之編「生物多様性科学のすすめ」"丸善.

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 永田 俊: "細菌の生物密度と現存量(竹内均監修)地球環境調査計測事典第2巻陸域編(2)"フジ・テクノシステム. 1162 (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nagata, T., Fukuda, R., Fukuda, H., Koike I: "Basin-Scale Geographic Patterns of Bacterioplankton Biomass and Production in the Subarctic Pacific, July-September 1997"Journal of Oceanography. 57(3). 301-313 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Koike, I., Ogawa, H., Nagata, T., Fukuda, R., Fukuda, H.: "Silicate to Nitrate Ratio of the Upper Sub-Arctic Pacific and the Bering Sea Basin in Summer: Its Implication for Phytoplankton Dynamics"Journal of Oceanography. 57(3). 253-260 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Toshi Nagata: "Role of DOM-microbial systems in the oceans"Bull. Plankton Society (Japan). 49(1). 15-20 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Toshi Nagata: "Dynamics of dissolved organic matter"Monthly Kaiyo. 29. 120-125 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nagata, T., Meon, B., Kirchman, D.L.: "Microbial degradation of peptidoglycan in seawater"Limnology and Oceanography. 48. 745-754 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yokokawa, T., T.Nagata, M.T.Cottrell, D.L.Kirchman: "Growth rate of the major phylogenetic bacterial groups in the Delaware estuary"Limnology and Oceanography. (in press). (2003)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2005-04-19  

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