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2003 Fiscal Year Final Research Report Summary

Studies of phytochromes and signal transductbn pathways in cyanobacterial phototaxis

Research Project

Project/Area Number 13440235
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 植物生理
Research InstitutionThe University of Tokyo

Principal Investigator

IKEUCHI Masahiko  The University of Tokyo, Graduate School of Arts and Sciences, Professor, 大学院・総合文化研究科, 教授 (20159601)

Project Period (FY) 2001 – 2003
Keywordscyanobacteria / blue-green algae / phototaxis / flavin sensor / photoconversion / phytochrome / photoreceptor / phycocyanin
Research Abstract

A gene for a novel flavin-binding protein that is involved in positive phototaxis was cloned from T. elongatus and expressed in E. coli, and expressed. The protein was crystallized and resolved at 2.0 A.
Novel phytochrome-like gene pixA was identified as a putative photoreceptor for positive phototaxis. Regulator proteins encoded by nixB and nixC are hypothesized by combinatorial mutagenesis.
Regulator genes essential for assembly of motility pili were identified as follows : pilG, pilH, pill, pilJ, pilL-N and pilL-C. The latter two genes were separately expressed on distinct loci on the chromosome.
Positive phototaxis photoreceptor PixJ1 protein was isolated from Synechocystis sp. PCC 6803. The protein thus isolated showed novel absorption spectra and difference spectrum in blue and green light regions. The chromophore of PixJ1 was concluded to be a derivative of phycocyanobilin.
Four novel flavin-binding photoreceptor proteins were expressed heterologously and their photocycles were partially characterized.
The PAS domain proteins of a filamentous cyanobacterium Anabaena sp. PCC 7120 were systematically studied by bioinformatics and biochemical analyses.
Genes for the pili subunits were systematically disrupted and identified as pil9,pi110, and pil11.

  • Research Products

    (14 results)

All 2004 2003 2001

All Journal Article (13 results) Book (1 results)

  • [Journal Article] Improved genetic transformation of the thermophilic cyanobacterium, Thermosynechococcus elongatus BP-12004

    • Author(s)
      Iwai et al.
    • Journal Title

      Plant Cell Physiology 45

      Pages: 171-175

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Response to oxidative stress involves a novel peroxiredoxin gene in the unicellular cyanobacterium Synechocystis sp. PCC 68032004

    • Author(s)
      Kobayashi et al.
    • Journal Title

      Plant Cell Physiology 45

      Pages: 290-299

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Use of segment-based microarray in the analysis of global gene expression in response to various environmental stresses in the cyanobacterium Anabaena sp. PCC 71202004

    • Author(s)
      Sato et al.
    • Journal Title

      J. Gen. Appl. Microbiol. 50

      Pages: 1-8

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Molecular evolution of PAS domain-containing proteins of filamentous cyanobacteria through the domain shuffling and domain duplication2004

    • Author(s)
      Narikawa et al.
    • Journal Title

      DNA Research 11

      Pages: 69-81

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Iwai, M., Katoh, H., Katayama, M. and Ikeuchi, M. Improved genetic transformation of the thermophilic cyanobacterium, Thermosynechococcus elongatus BP-1.2004

    • Author(s)
      Iwai, M., Katoh, H., Katayama, M., Ikeuchi, M.
    • Journal Title

      Plant Cell Physiol 45

      Pages: 171-175

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Response to oxidative stress involves a novel peroxiredoxin gene in the unicellular cyanobacterium Synechocystis sp. PCC 6803.2004

    • Author(s)
      Kobayashi, M., Ishizuka, T., Katayama, M., Kanehisa, M., Bhattacharyya-Pakrasi, M., Pakrasi, H.B., Ikeuchi, M.
    • Journal Title

      Plant Cell Physiol. 45

      Pages: 290-299

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Use of segment-based microarray in the analysis of global gene expression in response to various environmental stresses in the cyanobacterium Anabaena sp. PCC 7120.2004

    • Author(s)
      Sato, N., Ohmori, M., Ikeuchi, M., Tashiro, K., Wolk, P.C., Kaneko, T., Okada, K., Tsuzuki, M., Ehira, S., Katoh, H., Okamoto, S., Yoshimura, H., Fujisawa, T., Kamei, A., Yoshihara, S., Narikawa, R., Hamano, T., Tabata, S., Kuhara, S.
    • Journal Title

      J.Gen.Appl.Microbiol. 50

      Pages: 1-8

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Molecular evolution of PAS domain-containing proteins of filamentous cyanobacteria through the domain shuffling and domain duplication.2004

    • Author(s)
      Narikawa, R., Okamoto, S., Ikeuchi, M., Ohmori, M.
    • Journal Title

      DNA Res. 11

      Pages: 69-81

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Stable Positional Cloning of Long Continuous DNA in the Baclllus subti is genome vector2003

    • Author(s)
      Itaya et al.
    • Journal Title

      J. Biochemistry 134

      Pages: 513-519

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Biochemical and functional characterization of a eukaryotic-type protein kinase, SpkB, in the eyanobacterium, Synechocystis sp. PCC 68032003

    • Author(s)
      Kamei et al.
    • Journal Title

      Curr Microbiol 46

      Pages: 296-301

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Stable positional cloning of long continuous DNA in the Bacillus subtilis genome vector.2003

    • Author(s)
      Itaya, M., Fujita, K., Ikeuchi, M., Koizumi, M., Tsuge, K.
    • Journal Title

      J.Biochem. 134

      Pages: 513-519

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Biochemical and functional characterization of a eukaryotic-type protein kinase, SpkB, in the cyanobacterium, Synechocystis sp.2003

    • Author(s)
      Kamei, A., Yoshihara, S., Yuasa, T., Geng, X., Ikeuchi, M.
    • Journal Title

      PCC 6803.Curr.Microbiol. 46

      Pages: 296-301

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Post-genome project of cyanobacteria.2001

    • Author(s)
      Ohmori, M., M.Ikeuchi
    • Journal Title

      Tanpakushitu Kakusann Kouso 46

      Pages: 2486-2492

    • Description
      「研究成果報告書概要(欧文)」より
  • [Book] タンパク質・核酸・酵素(分担)2001

    • Author(s)
      大森正之・池内昌彦
    • Total Pages
      2492
    • Publisher
      シアノバクテリアの光合成遺伝子・タンパク質システムの解明
    • Description
      「研究成果報告書概要(和文)」より

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Published: 2008-05-27  

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