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2004 Fiscal Year Final Research Report Summary

Development of New Molecular Catalysts for Dioxygen Activation and Biomimetic Fuel Cell

Research Project

Project/Area Number 14204073
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field 物質変換
Research InstitutionKYUSHU UNIVERSITY

Principal Investigator

NARUTA Yoshinri  Kyushu University, Institute for Materials Chemistry and Engineering, Professor, 先導物質化学研究所, 教授 (00108979)

Co-Investigator(Kenkyū-buntansha) TANI Fumito  Kyushu University, Institute for Materials Chemistry and Engineering, Associate Professor, 先導物質化学研究所, 助教授 (80281195)
SHIMAZAKI Yuichi  Kyushu University, Institute for Materials Chemistry and Engineering, Research Associate, 先導物質化学研究所, 助手 (80335992)
Project Period (FY) 2002 – 2004
Keywordscytochrome c oxidase / copper complex / iron porphyrin / active site / chemical model / oxygen activation / superoxo complex / peroxo complex
Research Abstract

Cytochrome c oxidase (CcO) is known to be a family of enzymes, which metabolite dioxygen to water by an efficient four-electron reduction pathway with concomitant translocation of proton through membranes in mitochondria. The enzyme contains heme(hemea_3), (his)_3Cu(Cu_B), and His-cross linked Tyr at the active site. The exact functions, however, of these components as well as its dioxygen reduction mechanism. The enzyme is also interested on the similarity of its reaction with one at the O2 electrode of a fuel cell. Thus, the
We first examined the preparation of heme-Cu complexes and tried to clarify their reactivity with O_2 as well as the structure of the resultant peroxy complexes. Tris(pyridylmethyl)amine-tethered iron porphyrin was reacted with O2 to give the corresponding peroxo complex in a quite high stability. We obtained its single crystals and its X-ray crystallographic analysis showed the peroxo complex taking μ-η^2:η^1 structure. This was the first example of the structura … More l determination of hetero-dimetallic peroxo complexes. Howerver, the peroxo complexes were stable and only showed gradual decomposition to the corresponding μ-oxo one.
In order to simulate the dioxygen reaction at the enzyme, the remaining residues, Tyr-His and His as an axial ligand to heme a_3, are considered to be important. We have prepared an elaborate model, which bears all components at the CcO active site. This model exhibited an interesting reaction : First, it gave the corresponding peroxo complex [Fe^<III>-O_2-Cu^<II>], possibly μ-1,2 form, at a low temperature. It was gradually converted to the superoxy one [Fe^<III>-O_2・/Cu^I], where the Cu ion was Cu^I. Since peroxy-to-superoxy transformation has never been reported so far, this is a new reaction. This reaction partly simulates the early stage one of O_2 reaction in the enzyme. Thus, the Tyr group in the Tyr-His crosslink could play an important role for stabilization of the superoxy complex in the enzyme as a H+ donor. The success of the O2 complex at the accurate active site model opens the new way to clarify its further reaction. Less

  • Research Products

    (40 results)

All 2006 2005 2004 2003 2002 Other

All Journal Article (39 results) Book (1 results)

  • [Journal Article] Characterization of Phenoxyl Radical in Model Complexes for the Cu_B site of Cytochrome c Oxidase : Steady-State and Transient Absorption, UV resonance Raman, EPR, and DFT Studies for [M^IIBIAIPBr]Br2006

    • Author(s)
      Y.Nagano et al.
    • Journal Title

      J.Am.Chem.Soc. 126(印刷中)

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Syntheses, Crystal Structures, and Single Small Molecule Encapsulation Properties of Cavitand-Porphyrins2006

    • Author(s)
      J.Nakazawa et al.
    • Journal Title

      Bull.Chem.Soc.Jpn. 79(印刷中)

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] 光合成のモデル系 : 水の酸化による酸素発生2006

    • Author(s)
      成田 吉徳
    • Journal Title

      現代化学 (印刷中)

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Selective Formation of a Stable m-Peroxo Ferric Heme-Cu^II Complex form the Corresponding m-Oxo Fe^III-Cu^II Species and Hydrogen Peroxide2005

    • Author(s)
      Y.Naruta et al.
    • Journal Title

      Chem Commun. 8

      Pages: 1079-1081

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] UV Resonance Raman Study of Model Complexes of the Cu_B Site of Cytochrome c Oxidase2005

    • Author(s)
      Y.Nagano et al.
    • Journal Title

      J.Mol.Struct. 735-736

      Pages: 279-291

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] An Elaborate Functional Model of Cytochrome c Oxidase Active Site Displaying a Unique Conversion of a Heme-μ-peroxo-Cu^II Species to a Hemesuperoxo/Cu^I2005

    • Author(s)
      Y.Naruta et al.
    • Journal Title

      Angew.Chem.Int.Ed. 44・12

      Pages: 1836-1840

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Size-selective and Reversible Encapsulation of Single Small Hydrocarbon Molecules by a Cavitand-Porphyrin Species2005

    • Author(s)
      Y.Naruta et al.
    • Journal Title

      Angew.Chem.Int.Ed. 44・24

      Pages: 3744-3746

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Synthesis and Characterization of Ruthenium(II)-Nitrile Complexes with Bisamide-tpa Ligands(tpa=Tris(2-pyridylmethyl)amine)2005

    • Author(s)
      T.Kojima et al.
    • Journal Title

      Bull.Chem.Soc.Jpn. 78・12

      Pages: 2152-2158

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Hydrophobic Vitamin B_<12>. Part20 : Supernucleophilicity of Co(1) Heptamethyl Cobyrinate to ward Various Organic Halides2005

    • Author(s)
      H.Shimakoshi et al.
    • Journal Title

      Bull.Chem.Soc.Jpn. 78・6

      Pages: 859-863

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] 非ヘム型酸化酵素活性中心モデルとしての高原子価鉄(IV)オキソ錯体の合成とその酸化的触媒反応2005

    • Author(s)
      千代健文, 成田吉徳
    • Journal Title

      化学 60・6

      Pages: 70-71

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Selective Formation of a Stable m-Peroxo Ferric Heme-Cu^<II> Complex from the Corresponding m-Oxo Fe^<III>-Cu^<II> Species and Hydrogen Peroxide2005

    • Author(s)
      T.Chishiro, Y.Shimazaki, F.Tani, Y.Naruta
    • Journal Title

      Chem Commun. (8)

      Pages: 1079-1081

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] UV Resonance Raman Study of Model Complexes of the Cu_B Site of Cytochrome c Oxidase2005

    • Author(s)
      Y.Nagano, Jin-Gang Liu, Y.Naruta, T.Kitagawa
    • Journal Title

      J.Mol.Struct.

      Pages: 735-736,279-291

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] An Elaborate Functional Model of Cytochrome c Oxidase Active Site Displaying a Unique Conversion of a Heme-μ-peroxo-Cu^<II> Species to a Heme-superoxo/Cu^I2005

    • Author(s)
      J.-G.Liu, Y.Naruta, F.Tani
    • Journal Title

      Angew.Chem.Int.Ed. 44(12)

      Pages: 1836-1840

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] An Elaborate Functional Model of Cytochrome c Oxidase Active Site Displaying a Unique Conversion of a Heme-μ-peroxo-Cu^<II> Species to a Heme-superoxo/Cu^I2005

    • Author(s)
      J.-G.Liu, Y.Naruta, F.Tani
    • Journal Title

      Angew.Chem. 117(12)

      Pages: 1870-1874

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Hydrophobic Vitamin B_<12>. Part 20 : Supernucleophilicity of Co(I) Heptamethyl Cobyrinate towared Various Organic Halides2005

    • Author(s)
      H.Shimakoshi, Y.Maeyama, T.Kaieda, T.Matsuo, E.Matsui, Y.Naruta, Y.Hisaeda
    • Journal Title

      Bull.Chem.Soc.Jpn. 78(5)

      Pages: 859-863

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Size-selective and Reversible Encapsulation of Single Small Hydrocarbon Molecules by a Cavitand-Porphyrin Species2005

    • Author(s)
      J.Nakazawa, J.Hagiwara, M.Mizuki, Y.Shimazaki, F.Tani, Y.Naruta
    • Journal Title

      Angew.Chem.Int.Ed. 44(24)

      Pages: 3744-3746

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Size-selective and Reversible Encapsulation of Single Small Hydrocarbon Molecules by a Cavitand-Porphyrin Species2005

    • Author(s)
      J.Nakazawa, J.Hagiwara, M.Mizuki, Y.Shimazaki, F.Tani, Y.Naruta
    • Journal Title

      Angew.Chem. 117(24)

      Pages: 3810-3812

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Synthesis and Characterization of Ruthenium(II)-Nitrile Complexes with Bisamide-tpa Ligands (tpa=Tris(2-pyridylmethyl)amine)2005

    • Author(s)
      T.Kojima, K.Hayashi, Y.Shiota, Y.Tachi, Y.Naruta, T.Suzuki, K.Uezu, K.Yoshizawa
    • Journal Title

      Bull.Chem.Soc.Jpn. 78(12)

      Pages: 2152-2158

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Characterization of a Dinuclear Mn^v=O Complex and Its Efficient O_2 Evolution in the Presence of Water2004

    • Author(s)
      Y.Shimazaki, T.Nagano, H.Takesue, K.Ichihara, B.-H.Ye, F.Tani, Y.Naruta
    • Journal Title

      Angew.Chem.Int.Ed. 43(1)

      Pages: 98-100

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Efficient Synthesis of a Functional Porphyrin Bearing a Cross-linked Tyrosine-Histidine Mimic : A Novel Active Site Model of Cytochrome c Oxidase2004

    • Author(s)
      Jin-Gang Liu, Yoshinori Naruta, Fumito Tani, Takefumi Chishiro, Yoshimitsu Tachi
    • Journal Title

      Chem.Commun. (1)

      Pages: 120-121

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Dicopper-Dioxygen Complex Supported by Asymmetric Pentapyridine Dinucleating Ligand2004

    • Author(s)
      Y.Tachi, K.Aita, S.Teramae, F.Tani, Y.Naruta, S.Fukuzumi, S.Itoh
    • Journal Title

      Inorg.Chem. 42(15)

      Pages: 4558-4560

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Reactivity of the Indole Ring in Palladium(II) Complexes of 2N1O-Donor Ligands : Cyclopalladation and -Cation Radical Formation2004

    • Author(s)
      T.Motoyama, Y.Shimazaki, T.Yajima.Y.Nakabayashi, Y.Naruta, O.Yamauchi
    • Journal Title

      J Am.Chem.Soc. 126(23)

      Pages: 7378-7385

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Intramolecular Rearrangement of Regioselective Complexation Derived from Intramolecular CH/π Interaction in a Hydrophobic Ruthenium coordination Sphere2004

    • Author(s)
      T.Kojima, S.Miyazaki, K.Hayashi, Y.Shimazaki, F.Tani, Y.i Naruta, Yoshihisa Matsuda
    • Journal Title

      Chem.Eur.J. 10(24)

      Pages: 6402-6410

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Allosteric Binding of Ag^+ Ion to Cerium(IV) Bis-porphyrinates Enhances the rotational Activity of Porphyrin Ligands2003

    • Author(s)
      W.Ikeda, M.Takeuchi, S.Shinkai, F.Tani, Y.Naruta, S.Sakamoto, K.Yamaguchi
    • Journal Title

      Chem.Eur.J. 9(4)

      Pages: 862-870

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] A novel synthesis of water-soluble porphyrins by a regiospecific sulfonization2003

    • Author(s)
      B.-H.Ye, Y.Naruta
    • Journal Title

      Tetrahedron 59(20)

      Pages: 3593-3601

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] An Active Site Model of Prostaglandin H Synthase : Formation of an Aryloxyl Radical Overhanged in Iron ‘Twin-Coronet' Porphyrin and Its Catalytic Oxygenation of 1,4-Diene2003

    • Author(s)
      E.Matsui, Y.Naruta, F.Tani, Y.Shimazaki
    • Journal Title

      Angew.Chem.Int.Ed. 42(24)

      Pages: 2744-2747

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] An Active Site Model of Prostaglandin H Synthase : Formation of an Aryloxyl Radical Overhanged in Iron ‘Twin-Coronet' Porphyrin and Its Catalytic Oxygenation of 1,4-Diene2003

    • Author(s)
      E.Matsui, Y.Naruta, F.Tani, Y.Shimazaki
    • Journal Title

      Angew.Chem. 116(24)

      Pages: 2850-2853

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Isolation and Crystal Structure of a Peroxo-Bridged Heme-Copper Complex2003

    • Author(s)
      T.Chishiro, Y.Shimazaki, F.Tani, Y.Tachi, Y.Naruta, S.Karasawa, S.Hayami, Y.Maeda
    • Journal Title

      Angew.Chem.Int.Ed 42(24)

      Pages: 2788-2791

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Isolation and Crystal Structure of a Peroxo-Bridged Heme-Copper Complex2003

    • Author(s)
      T.Chishiro, Y.Shimazaki, F.Tani, Y.Tachi, Y.Naruta, S.Karasawa, S.Hayami, Y.Maeda
    • Journal Title

      Angew.Chem. 115(24)

      Pages: 2894-2897

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] One-Electron Oxidized Nickel(II)-(Disalicylidene)diamine Complex : Temperature-Dependent Tautomerism between Ni(III)-Phenolate and Ni(II)-Phenoxyl Radical States2003

    • Author(s)
      Y.Shimazaki, F.Tani, K.Fukui, Y Naruta, O.Yamauchi
    • Journal Title

      J.Am.Chem.Soc. 125(35)

      Pages: 10513-10514

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Molecular Recognition by a Cu(II)-2,2'-bipy Complex Involving Coordination and Hydrogen Bonding2003

    • Author(s)
      T.Kojima, H.Kitaguchi, Y.Tachi, Y.Naruta, Y.Matsuda
    • Journal Title

      Chem.Lett. 32(12)

      Pages: 1172-1173

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Characterization of a Dinuclear Mn^v=O Complex and Its Efficient O_2 Evolution in the Presence of Water2003

    • Author(s)
      Y.Shimazaki, T.Nagano, H.Takesue, K.Ichihara, B.-H.Ye, F.Tani, Y.Naruta
    • Journal Title

      Angew Chem. 116(1)

      Pages: 100-102

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Highly Terminal-Selective Epoxidation of Linolenic Acid with an Amphiphilic Iron Porphyrin Catalyst Casted in Milayer Membranes2002

    • Author(s)
      Y.Naruta, M.Goto, T Tawara, F.Tani
    • Journal Title

      Chem.Lett. 31(2)

      Pages: 162-163

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] UV Resonance Raman Characterization of Model Compounds of Tyr^<244> of Bovine Cytochrome c Oxidase in Its Neutral-, Deprotonated Anion-, and Deprotonated Neutral Radical-Forms : Effects of Covalent Binding between Tyrosine and Histidine2002

    • Author(s)
      M.Aki, T.Ogura, Y.Naruta, T.H.Le, T.Sato, T.Kitagawa
    • Journal Title

      J.Phys.Chem.A 106(14)

      Pages: 3436-3444

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Catecholatoiron Complexes in Relevance to Catechol Dioxygenases : Chlorocatecholatoiron Complexes Compared with 3,5-di-tert-butylcatecholatoiron Complex in the Solid State and in Solution2002

    • Author(s)
      T.Funabiki, A.Fukui, Y.Hitomi, M.Higuchi, T.Yamamoto, T.Tanaka, F.Tani, Y.Naruta
    • Journal Title

      J.Inorg.Biochem. 89(1)

      Pages: 151-158

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Preparation of 4-(4,5-Diphenyl-1H-imidazole-2-yl)- Benzaldehyde and Its Practical Synthetic Use In The Synthesis of Unsymmetrically Substituted Imidazoles2002

    • Author(s)
      M.Kimura, M.Tsunenaga, T.Koyama, H.Iga, R.Aizawa, Y.Tachi, Y.Naruta
    • Journal Title

      ITE Lett. 3(1)

      Pages: 30-34

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Dioxygen Adducts of Cobalt "Single-coronet" Porphyrin Bearing Hydroxyl Groups in Its Cavity as Models for Myoglobin and Hemoglobin : Observation of Unusually Low Frequency of n(O-O) in Resonance Raman Spectru2002

    • Author(s)
      S.Nakayama, F.Tani, M.Matsu-ura, Y.Naruta
    • Journal Title

      Chem Lett. 31(5)

      Pages: 496-497

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Syntheses, Crystal Structures, and Single Small Molecule Encapsulation Properties of Cavitand-Porphyrins

    • Author(s)
      J.Nakazawa, M.Mizuki, J.Hagiwara, Y.Shimazaki, F.Tani, Y.Naruta
    • Journal Title

      Bull.Chem.Soc.Jpn. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Characterization of Phenoxyl Radical in Model Complexes for the Cu_B site of Cytochrome c Oxidase : Steady-State and Transient Absorption, UV resonance Raman, EPR, and DFT Studies for [M^<II>BIAIPBr]Br

    • Author(s)
      Y.Nagano, J.-G.Liu, Y.Naruta, T.Ikoma, S.Tero-Kubota, T.Kitagawa
    • Journal Title

      J.Am.Chem.Soc. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Book] 化学 : 元素が彩る暮らしと未来2006

    • Author(s)
      成田吉徳
    • Publisher
      クバプロ(印刷中)
    • Description
      「研究成果報告書概要(和文)」より

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Published: 2007-12-13  

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