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2005 Fiscal Year Final Research Report Summary

Reversibility of peroxisomal differentiation in higher plants.

Research Project

Project/Area Number 15207005
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field 植物生理・分子
Research InstitutionNational Institute for Basic Biology (2004-2005)
Okazaki National Research Institutes (2003)

Principal Investigator

NISHIMURA Mikio  National Institute for Basic Biology, Department of Cell Biology, Professor, 高次細胞機構研究部門, 教授 (80093061)

Project Period (FY) 2003 – 2005
Keywordsperoxisome / glyoxysome / Arabidopsis thaliana / mitochondria / organelle differentiation / apm mutants / peroxin / protein traffic
Research Abstract

Peroxisomes in higher plantcells are known to differentiate in function depending on the cell type. By a comprehensive survey of peroxisomal genes in the entire Arabidopsis genome, we found 286 candidates of peroxisomal genes. They included all genes for peroxisomal enzymes reported up to date, and most of them encoded functionally unknown proteins in peroxisomes. Analyses of gene expression profiles revealed that peroxisomal differentiation is caused by the expression of specific genes that are induced in specific organs in addition to constitutively expressed genes. The clustering analyses suggested that basic functions of peroxisomewereβ-oxidation, H_2O_2 degradation, branched chain amino acid catabolism and some unknown functions, and that peroxisomesinseedlings, cotyledons, leavesand roots were differentiated by organ-specific expressed genes.
In one of these mutants, apm1, the peroxisomes are long and reduced in number, apparently as a result of inhibition of division. We showed that APM1 encodes DRP3A (dynamin-related protein 3A), and that mutations in APM1/DRP3A also caused aberrant morphology of mitochondria. The transient expression analysis showed that DRP3A is associated with the cytosolicsideofperoxisomes. Thesesfindingsindicate that the same dynamin molecule is involved in peroxisomal and mitochondrialdivision in higherplants.
From analyses of apm2 and apm4 mutants which are difectiveinproteintransportbyPTS1-dependent pathway, we determined that APM2 and APM4 genes encode PEROXIN13 (PEX13) and PEX12, respectively, and revealed that they are responsible for PTS2-as well as PTS1-dependent protein on the peroxisomal membrane.

  • Research Products

    (27 results)

All 2005 2004 2003

All Journal Article (26 results) Book (1 results)

  • [Journal Article] Differential contribution of two peroxisomal protein receptors to the maintenance of peroxisomal functions in Arabidopsis.2005

    • Author(s)
      Makoto Hayashi
    • Journal Title

      J. Biol. Chem. 280

      Pages: 14829-14835

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] The involvement of tonoplast proton pumps and Na^+(K^+)/H^+ exchangers in the change of pental color during flower-opening of morning glory, Ipomoea tricolor cv. Heavenly Blue.2005

    • Author(s)
      Kumi Yoshida
    • Journal Title

      Plant Cell Physiol. 46

      Pages: 407-415

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Peroxisomal localization of a myosine XI isoform Arabidopsis thaliana.2005

    • Author(s)
      Kohsuke Hashimoto
    • Journal Title

      Plant Cell Physiol. 46

      Pages: 782-789

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Vacuolar processing enzyme is essential for microtoxin-induced cell death in Arabidopsis thaliana.2005

    • Author(s)
      Miwa Kuroyanagi
    • Journal Title

      J. Biol. Chem. 280

      Pages: 32914-32920

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] A defect in glyoxysomal fatty acid β-oxidation reduces jasmonic acid accumulation in Arabidopsis.2005

    • Author(s)
      Meshack Afitlhile
    • Journal Title

      Plant Physiol. Biochem. 43

      Pages: 603-609

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Differential contribution of two peroxisomal protein receptors to the maintenance of peroxisomal functions in Arabidopsis2005

    • Author(s)
      Hayashi, M., K.Nito, M.Yagi, T.Kamada, M Nishimura
    • Journal Title

      J.Biol.Chem. 280

      Pages: 14829-14835

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] The involvement of tonoplast proton pumps and Na+(K+)/H+ exchangers in the change of petal color during flower-opening of morning glory, Ipomoea tricolor cv.Heavenly Blue.2005

    • Author(s)
      Yoshida, K., M.Kawachi, M.Mori, M.Maeshima, M.Kondo, M.Nishimura, T.Kondo
    • Journal Title

      Plant Cell Physiol. 46

      Pages: 407-415

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Peroxisomal localization of a myosin XI isoform in Arabidopsis thaliana.2005

    • Author(s)
      Hashimoto, K., H.lgarashi, S.Mano, M.Nishimura, T.Shimmen, E.Yokota
    • Journal Title

      Plant Cell Physiol. 46

      Pages: 782-789

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Vacuolar processing enzyme is essential for microtoxin-induced cell death in Arabidopsis thaliana.2005

    • Author(s)
      Kuroyanagi, M., K.Yamada, N.Hatsugai, M.Kondo, M.Tazawa, M.Nishimura, I.Hara-Nishimura
    • Journal Title

      J.Biol.Chem. 280

      Pages: 32914-32920

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] A defect in glyoxysomal fatty acid β-oxidation reduces jasmonic acid accumulation in Arabidopsis.2005

    • Author(s)
      Afitlhile, M.M., H.Fukushige, M.Nishimura, D.Hildebrand
    • Journal Title

      Plant Physiol.Biochem. 43

      Pages: 603-609

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] An Arabidopsis dynamin-related protein, DRP3A, control both peroxisomal and mitochondrial division.2004

    • Author(s)
      Shoji Mano
    • Journal Title

      Plant J. 38

      Pages: 487-498

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Cryptochromes and phytochromes synergetically regulate the Arabidopsis root greening under blue light.2004

    • Author(s)
      Takeshi Usami
    • Journal Title

      Plant Cell Physiol. 45

      Pages: 1798-1808

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] An Arabidopsis dynamin-related protein, DRP3A, controls both peroxisomal and mitochondrial division. Plant J. 38 : 487-498 (2004)2004

    • Author(s)
      Mano, S., C.Nakamori, M.Kondo, M.Hayashi, M.Nishimura
    • Journal Title

      Plant J. 38

      Pages: 487-498

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Cryptochromes and phytochromes synergetically regulate the Arabidopsis root greening under blue light.2004

    • Author(s)
      Usami, T., N.Mochizuki, M.Kondo, M.Nishimura, A.Nagatani
    • Journal Title

      Plant Cell Physiol. 45

      Pages: 1798-1808

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana.2003

    • Author(s)
      Tomoe Kamada
    • Journal Title

      Plant Cell Physiol. 44

      Pages: 1275-1289

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Novel glyoxysomal protein kinase, GPK1, identified by proteomic analysis of glyoxysomes in etiolated cotyledons of Arabidopsis thaliana.2003

    • Author(s)
      Youichiro Fukao
    • Journal Title

      Plant Cell Physiol. 44

      Pages: 1002-1012

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Identification of peroxisomal targeting signal of pumpkin catalase and the binding analysis with PTS1 receptor.2003

    • Author(s)
      Akane Kamigaki
    • Journal Title

      Plant J. 33

      Pages: 161-175

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Existence of catalase-less peroxisomes in Sf21 insect cells.2003

    • Author(s)
      Mikinori Kurisu
    • Journal Title

      Biochem. Biophys. Res. Commun. 306

      Pages: 169-176

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Presence of glyoxylate cycle enzymes in the mitochondria of Euglena gracilis.2003

    • Author(s)
      Kouki Ono
    • Journal Title

      J. Eukaryo. Microbiol. 50

      Pages: 92-96

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Entering a new era of research on plant peroxisomes.2003

    • Author(s)
      Makoto Hayashi
    • Journal Title

      Curr. Opin. Plant Biol. 6

      Pages: 577-582

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana2003

    • Author(s)
      Kamada, T., K.Nito, H.Hayashi, S.Mano, M.Hayashi, M.Nishimura
    • Journal Title

      Plant Cell Physiol. 44

      Pages: 1275-1289

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Novel glyoxysomal protein kinase, GPK1, identified by proteomic analysis of glyoxysomes in etiolated cotyledons of Arabidopsis thaliana.2003

    • Author(s)
      Fukao, Y., M.Hayashi, I.Hara-Nishimura, M.Nishimura
    • Journal Title

      Plant Cell Physiol. 44

      Pages: 1002-1012

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Identification of peroxisomal targeting signal of pumpkin catalase and the binding analysis with PTS1 receptor.2003

    • Author(s)
      Kamigaki, A., S.Mano, K.Terauchi, Y.Nishi, Y.Tachibe-Kinoshita, M.Kondo, K.Nito, M.Hayashi, M.Nishimura, M.Esaka
    • Journal Title

      Plant J. 33

      Pages: 161-175

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Existence of catalase-less peroxisomes in Sf21 insect cells.2003

    • Author(s)
      Kurisu, M., M.Morita, Y.Kashiwayama, S.Yokota, H.Hayashi, Y.Sakai, S.Ohkuma, M.Nishimura, T.Imanaka
    • Journal Title

      Biochem.Biophys.Res.Commun. 306

      Pages: 169-176

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Presence of glyoxylate cycle enzymes in the mitochondria of Euglena gracilis2003

    • Author(s)
      Ono, K., M.Kondo, T.Osafune, K.Miyatake, H.lnui, S.Kitaoka, M.Nishimura, Y.Nakano
    • Journal Title

      J.Eukaryo.Microbiol. 50

      Pages: 92-96

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Entering a new era of research on plant peroxisomes.2003

    • Author(s)
      Hayashi, M., M.Nishimura
    • Journal Title

      Curr.Opin.Plant Biol. 6

      Pages: 577-582

    • Description
      「研究成果報告書概要(欧文)」より
  • [Book] Vitamin and Hormones2005

    • Author(s)
      Shoji Mano
    • Total Pages
      43
    • Publisher
      Elsevire
    • Description
      「研究成果報告書概要(和文)」より

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Published: 2008-05-27  

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