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2005 Fiscal Year Final Research Report Summary

Development of artificial receptors that can recognize a specific protein surface in aqueous solution

Research Project

Project/Area Number 15350104
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Chemistry related to living body
Research InstitutionKyoto University (2005)
Kyushu University (2003-2004)

Principal Investigator

HAMACHI Itaru  Kyoto University, Engineering, Professor, 工学研究科, 教授 (90202259)

Co-Investigator(Kenkyū-buntansha) OJIDA Akio  Kyoto University, Engineering, Assistant Professor, 工学研究科, 助手 (10343328)
Project Period (FY) 2003 – 2005
Keywordsmolecular recognition / chemosensor / phosphorylated protein / metal complex
Research Abstract

During the project term, molecular recognition chemistry toward phosphorylated proteins and peptides has greatly advanced both in fundamental science and application. My group newly developed artificial receptor molecules based on Zn-metal complexes which can recognize phosphorylated peptides and proteins and sense them by a fluorescence signal change. These can be carried out in aqueous solution and SDS-PAGE gel plates. Detailed study using isothermal titration calorimetry clearly demonstrates that the Zn sites of the receptors tightly bind to the anionic phospate sites of the peptide and thus shows the strong affinity. Further more, using this strong binding, we also tested the inhibition capability of the receptors for the phospho-protein protein interactions. In the case of the cross-linking binding mode of the dinuclear Zn complex type of receptors, it is clear that the effective disruption of the phospho-protein protein interactions between WW domain and the phosphorylated C-terminal domain of Polymerase. These results clearly indicate that artificial receptors can act not only as a simple fluorescent chemosensor for phosphorylated peptides and proteins, but also as a poteintial disruptor for the phospho-protein protein interactions. It is expected that the present accomplishment strongly stimulate the relevant research and may lead to a more sophisticated molecule in the near future.

  • Research Products

    (18 results)

All 2006 2005 2004 2003

All Journal Article (18 results)

  • [Journal Article] Label-Free, Real-Time Glycosyltransferase Assay Based on a Fluorescent Artificial Chemosensor,2006

    • Author(s)
      J.WONGKONGKATEP, Y.MIYAHARA, A.OJIDA, I.HAMACHI
    • Journal Title

      Angew. Chem., Int. Ed., 45

      Pages: 665-668

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Design and Synthesis of Bis(Zn(II)-dipicolylamine)-based Fluorescent Artificial Chemosensors for Phosphorylated Proteins/peptides,2006

    • Author(s)
      A.OJIDA, I.HAMACHI
    • Journal Title

      Bull. Chem. Soc. Japan., 1

      Pages: 35-46

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Effective Disruption of Phosphoprotein-Protein Surface Interaction Using Zn(II) Dipicolylamine-Based Artificial Receptors via Two-Point Interaction,2006

    • Author(s)
      A.OJIDA, M.INOUE, Y.MITO-OKA, H.TSUTUMIi, K.SADA, I.HAMACHI
    • Journal Title

      J. Am. Chem. Soc., 128

      Pages: 2052-2058

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Label-Free, Real-Time Glycosyltransferase Assay Based on a Fluorescent Artificial Chemosensor,2006

    • Author(s)
      J.WONGKONGKATEP, Y.MIYAHARA, A.OJIDA, I.HAMACHI
    • Journal Title

      Angew.Chem., Int.Ed. 45

      Pages: 665-668

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Design and Synthesis of Bis(Zn(II)-dipicolylamine)-based Fluorescent Artificial Chemosensors for Phosphorylated Proteins/peptides,2006

    • Author(s)
      A.OJIDA, I.HAMACHI
    • Journal Title

      Bull.Chem.Soc.Japan. 1

      Pages: 35-46

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Effective Disruption of Phosphoprotein-Protein Surface Interaction Using Zn(II) Dipicolylamine-Based Artificial Receptors via Two-Point Interaction,2006

    • Author(s)
      A.OJIDA, M.INOUE, Y.MITO-OKA, H.TSUTUMIi, K.SADA, I.HAMACHI.
    • Journal Title

      J.Am.Chem.Soc. 128

      Pages: 2052-2058

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Molecular Recognition and Fluorescence Sensing toward mono-Phosphorylated Peptides in Aqueous Solution by bis(Zn(II)-dipicolylamine)-based Artificial Receptors,2005

    • Author(s)
      A.OJIDA, Y.MITO-OKA, K.SADA, I.HAMACHI
    • Journal Title

      J. Am. Chem. Soc., 126

      Pages: 2454-2463

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Cooperation between Artificial Receptor and Supramolecular Hydrogel for Sensing and Discriminating Phosphate Derivatives,2005

    • Author(s)
      S.YAMAGUCHI, I.YOSHIMURA, T.KOHIRA, S.TAMARU, I.HAMACHI
    • Journal Title

      J. Am. Chem. Soc., 127

      Pages: 11835-11841

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Cooperation between Artificial Receptor and Supramolecular Hydrogel for Sensing and Discriminating Phosphate Derivatives,2005

    • Author(s)
      S.YAMAGUCHI, I.YOSHIMURA, T.KOHIRA, S.TAMARU, I.HAMACHI
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 11835-11841

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Phosphoprotein-Selective Recognition and Staining in SDS-PAGE by Bis-Zn(II)-dipycolylamine-Appended Anthracene,2004

    • Author(s)
      A.OJIDA, T.KOHIRA, I.HAMACHI
    • Journal Title

      Chemistry Letters, 33

      Pages: 1024-1025

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Molecular Recognition in a Supramolecular Hydrogel to Afford a Semi-wet Sensor Chip,2004

    • Author(s)
      I.YOSHIMURA, Y.MIYAHARA, N.KASAGI, H.YAMANE, A.OJIDA, I.HAMACHI
    • Journal Title

      J. Am. Chem. Soc., 126

      Pages: 12204-12205

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Recognition and Fluorescence Sensing of Specific Amino Acid Residue on Protein Surface Using Designed Molecules,2004

    • Author(s)
      A.OJIDA, Y.MIYAHARA, T.KOHIRA, I.HAMACHI
    • Journal Title

      Biopolymers-Peptide Science, 76

      Pages: 177-184

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Phosphoprotein-Selective Recognition and Staining in SDS-PAGE by Bis-Zn(II)-dipycolylamine-Appended Anthracene,2004

    • Author(s)
      A.OJIDA, T.KOHIRA, I.HAMACHI
    • Journal Title

      Chemistry Letters 33

      Pages: 1024-1025

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Molecular Recognition and Fluorescence Sensing toward mono-Phosphorylated Peptides in Aqueous Solution by bis(Zn(II)-dipicolylamine)-based Artificial Receptors,2004

    • Author(s)
      A.OJIDA, Y.MITO-OKA, K.SADA, I.HAMACHI
    • Journal Title

      J.Am.Chem.Soc. 126

      Pages: 2454-2463

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Molecular Recognition in a Supramolecular Hydrogel to Afford a Semi-wet Sensor Chip,2004

    • Author(s)
      I.YOSHIMURA, Y.MIYAHARA, N.KASAGI, H.YAMANE, A.OJIDA, I.HAMACHI
    • Journal Title

      J.Am.Chem.Soc 126

      Pages: 12204-12205

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Recognition and Fluorescence Sensing of Specific Amino Acid Residue on Protein Surface Using Designed Molecules,2004

    • Author(s)
      A.OJIDA, Y.MIYAHARA, T.KOHIRA, I.HAMACHI
    • Journal Title

      Biopolymers-Peptide Science 76

      Pages: 177-184

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Cross-Linking Strategy for Molecular Recognition and Fluorescent Sending of a Multi-phosphorylated Peptide in Aqueous Solution,2003

    • Author(s)
      A.OJIDA, M.INOUE, Y.MITO-OKA, I.HAMACHI
    • Journal Title

      J. Am. Chem. Soc., 125

      Pages: 10184-10185

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Cross-Linking Strategy for Molecular Recognition and Fluorescent Sending of a Multi-phosphorylated Peptide in Aqueous Solution,2003

    • Author(s)
      A.OJIDA, M.INOUE, Y.MITO-OKA, I.HAMACHI
    • Journal Title

      J.Am.Chem.Soc. 125

      Pages: 10184-10185

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2007-12-13  

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