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2005 Fiscal Year Final Research Report Summary

Studies on functional domains essential for the retrotransposition of LINE

Research Project

Project/Area Number 15370003
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Genetics/Genome dynamics
Research InstitutionThe University of Tokyo

Principal Investigator

FUJIWARA Haruhiko  The University of Tokyo, Graduate School of Frontier Sciences, Professor, 大学院・新領域創成科学研究科, 教授 (40183933)

Project Period (FY) 2003 – 2005
Keywordsnon-LTR retrotransposon / LINE / endonuclease / telomere / target specific LINE / reverse transcriptase / rDNA specific LINE / retrotransposition mechanism
Research Abstract

During the project term, we clarified the essential domains for the retrotranspositions of LINE, using mainly telomere specific LINE SART1, as shown below (1 to 3, TRAS1 for 4, R1 for 5).
1. We found novel domains NLS and telomere accession signals in ORF1 proteins in SART1 (Matsumoto, T., et al.Mol.Cell Biol. 24,105-122. (2004)).
2. We found eukaryotic translational coupling for the regulation of ORF1 and ORF2 translation in SART1 (Kojima, KK.et al.Mol.Cell.Biol.25, 7675-7686. (2005)).
3. We clarified the 3'UTR structure which is recognized by reversetranscription unit of SART1 (Osanai, M., et al.Mol.Cell Biol.24, 7902-7913. (2004)).
4. Collaborating with Dr.Maita in Kyusyu Univ., we firstly reported the crystal structure of endonuclease domain of TRAS1 (Maita, N., et al.J.Biol.Chem.279, 41067-41076. (2004)).
5.We established the retrotransposion assay system for 28SrDNA specific LINE, R1, which enable us to use several target specific LINE, telomere specific LINEs, SART1 and TRAS1,and rDNA specific R1,for future analysis (Anzai T., et al.Nucleic Acids Res.33, 1993-2002. (2005)).

  • Research Products

    (35 results)

All 2006 2005 2004 2003 Other

All Journal Article (35 results)

  • [Journal Article] Expression of one isoform of GTP cyclohydrolase I coincides with the larval black markings of the swallowtail butterfly, Papilio xuthus. Insect Biochem.2006

    • Author(s)
      Futahashi, H., Fujiwara, H.
    • Journal Title

      Molec. Biol. 36

      Pages: 63-70

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Essential domains for Ribonucleoprotein complex formation required for retrotransposition of a telomere specific non-LTR retrotransposon SART1.2006

    • Author(s)
      Matsumoto, T., Hamada, M., Osanai, M., Fujiwara,H.
    • Journal Title

      Mol. Cell Biol

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Expression of one isoform of GTP cyclohydrolase I coincides with the larval black markings of the swallowtail butterfly, Papilio xuthus.2006

    • Author(s)
      Futahashi, H., Fujiwara, H.
    • Journal Title

      Insect Biochem. Molec. Biol. 36

      Pages: 63-70

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Essential domains for Ribonucleoprotein complex formation required for retrotransposition of a telomere specific non-LTR retrotransposon SART1.2006

    • Author(s)
      Matsumoto, T., Hamada, M., Osanai, M., Fujiwara, H.
    • Journal Title

      Mol.Cell Biol (in press.)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Identification and characterization of the telomerase reverse transcriptase of Bombyx mori (silkworm) and Tribolium castaneum (flour beetle).2006

    • Author(s)
      Osanai, M., Kojima, K.K., Futahashi, R., Yaguchi, S., Fujiwara, H.
    • Journal Title

      Gene. (in press.)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Functional roles of read-through 28S rRNA sequence in in vivo retrotransposition of non-LTR retrotransposon R1Bm.2005

    • Author(s)
      Anzai T., Osanai, M., Hamada, M., Fujiwara, H.
    • Journal Title

      Nucleic Acids Res 33

      Pages: 1993-2002

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] An extraordinary retrotransposon family encoding dual endonucleases2005

    • Author(s)
      Kojima, K.K., Fujiwara, H.
    • Journal Title

      Genome Research 15

      Pages: 1106-1117

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Melanin-synthesis enzymes co-regulate stage-specific larval cuticular markings in the swallowtail butterfly, Papilio xuthus. Development2005

    • Author(s)
      Futahashi, R., Fujiwara, H.
    • Journal Title

      Development, Genes and Evolution 215

      Pages: 519-529

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Telomere-specific non-LTR retrotransposons and telomere maintenance in the silkworm, Bombyx mori" Chromosome Research2005

    • Author(s)
      Fujiwara, H., Osanai, M., Matsumoto, T., Kojima, K.K.
    • Journal Title

      Chromosome Research 13

      Pages: 455-467

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Eukaryotic translation coupling in UAAUG stop-start codons for the bicystronic RNA translation of non-LTR retrotransposon SART1.2005

    • Author(s)
      Kojima, K.K., Matsumoto, T., Fujiwara, H.
    • Journal Title

      Mol. Cell Biol 25

      Pages: 7675-7686

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Long-term inheritance of the 28S rDNA-specific retrotransposon R22005

    • Author(s)
      Kojima, K.K., Fujiwara, H.
    • Journal Title

      Mol. Biol. Evol. 22

      Pages: 2157-2165

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Functional roles of read-through 28S rRNA sequence in in vivo retrotransposition of non-LTR retrotransposon, R1Bm.2005

    • Author(s)
      Anzai T., Osanai, M., Hamada, M., Fujiwara, H.
    • Journal Title

      Nucleic Acids Res. 33

      Pages: 1993-2002

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Melanin-synthesis enzymes co-regulate stage-specific larval cuticular markings in the swallowtail butterfly, Papilio xuthus.2005

    • Author(s)
      Futahashi, R., Fujiwara, H.
    • Journal Title

      Development, Genes and Evolution 215

      Pages: 519-529

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] (Review article) Telomere-specific non-LTR retrotransposons and telomere maintenance in the silkworm, Bombyx mori2005

    • Author(s)
      Fujiwara, H., Osanai, M., Matsumoto, T., Kojima, K.K.
    • Journal Title

      Chromosome Research 13

      Pages: 455-467

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Eukaryotic translation coupling in UAAUG stop-start codons for the bicystronic RNA translation of non-LTR retrotransposon SART1.2005

    • Author(s)
      Kojima, K.K., Matsumoto, T., Fujiwara, H.
    • Journal Title

      Mol.Cell Biol 25

      Pages: 7675-7686

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Long-term inheritance of the 28SrDNA-specific retrotransposon R22005

    • Author(s)
      Kojima, K.K., Fujiwara, H.
    • Journal Title

      Mol.Biol.Evol. 22

      Pages: 2157-2165

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Cross-genome screening of novel sequence-specific non-LTR retrotransposons : various multicopy RNA genes and microsatellites are selected as targets.2004

    • Author(s)
      Kojima, K.K., Fujiwara, H.
    • Journal Title

      Mol. Biol. Evol. 21

      Pages: 207-217

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Targeted nuclear import of ORF1 protein is required for in vivo retrotransposition of telomere-specific non-long terminal repeat retrotransposon, SART1.2004

    • Author(s)
      Matsumoto, T., Takahashi, H., Fujiwara, H.
    • Journal Title

      Mol. Cell. Biol. 24

      Pages: 105-122

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Novel motifs in 3'-untranslated region required for precise reverse transcription start of telomere specific LINE, SART1.2004

    • Author(s)
      Osanai, M., Takahashi, H., Kojima, K.K., Hamada, M., Fujiwara,H.
    • Journal Title

      Mol. Cell. Biol. 24

      Pages: 7902-7913

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Crystal structure of the endonuclease domain encoded by the telomere-specific LINE, TRAS1.2004

    • Author(s)
      Maita, N., Anzai, T., Aoyagi, H., Mizuno, H., Fujiwara,H.
    • Journal Title

      J. Biol. Chem 279

      Pages: 41067-41076

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] 昆虫のテロメア維持機構2004

    • Author(s)
      小島健司, 藤原晴彦
    • Journal Title

      放射線生物研究 39

      Pages: 39-50

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] テロメア特異的LINEの転移メカニズムと適応戦略2004

    • Author(s)
      藤原晴彦
    • Journal Title

      タンパク質核酸酵素 49

      Pages: 2090-2096

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Cross-genome screening of novel sequence-specific non-LTR retrotransposons : various multicopy RNA genes and microsatellites are selected as targets.2004

    • Author(s)
      Kojima, K.K., Fujiwara, H.
    • Journal Title

      Mol.Biol.Evol. 21

      Pages: 207-217

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Targeted nuclear import of ORF1 protein is required for in vivo retrotransposition of telomere-specific non-long terminal repeat retrotransposon, SART1.2004

    • Author(s)
      Matsumoto, T., Takahashi H., Fujiwara, H.
    • Journal Title

      Mol.Cell Biol. 24

      Pages: 105-122

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Novel motifs in 3'-untranslated region required for precise reverse transcription start of telomere specific LINE, SART1.2004

    • Author(s)
      Osanai, M., Takahashi, H., Kojima, K.K., Hamada, M., Fujiwara, H.
    • Journal Title

      Mol.Cell Biol. 24

      Pages: 7902-7913

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Crystal structure of the endonuclease domain encoded by the telomere-specific LINE, TRAS1.2004

    • Author(s)
      Maita, N., Anzai, T., Aoyagi, H., Mizuno, H., Fujiwara, H.
    • Journal Title

      J.Biol.Chem 279

      Pages: 41067-41076

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Telomere maintenance in insects. (in Japanese)2004

    • Author(s)
      Kojima, K.K., Fujiwara, H.
    • Journal Title

      Houshasen Seibutsu Kenkyu. 39

      Pages: 39-50

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Adaptive strategy and netrotransposition mechanism for telomerespecific Line. (in Japanese)2004

    • Author(s)
      Fujiwara, H.
    • Journal Title

      Tanpakushitsu Kakusan Koso. 49

      Pages: 2090-2096

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Evolution of target specificity in R1 clade non-LTR retrotransposons.2003

    • Author(s)
      Kojima, K.K., Fujiwara, H.
    • Journal Title

      Mol. Biol. Evol 20

      Pages: 351-361

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Female-specific wing degeneration caused by ecdysteroid in the tussock moth, Orgyia recens : Hormonal and developmental regulation of sexual dimorphism formation.2003

    • Author(s)
      Lobbia, S., Niitsu, K., Fujiwara,H
    • Journal Title

      J. Insect Science 3:11

      Pages: 1-7

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] cDNA cloning and mRNA expression of L-3,4-dihydroxyphenylalanine decarboxylase gene homologue from the silkworm, Bombyx mori.2003

    • Author(s)
      Hwang JS, Kang SW, Goo TW, Yun EY, Lee JS, Kwon OY, Chun T, Suzuki Y, Fujiwara H.
    • Journal Title

      Biotechnol Lett. 25(12)

      Pages: 997-1002

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Evolution of target specificity in R1 clade non-LTR retrotransposons.2003

    • Author(s)
      Kojima, K.K., Fujiwara, H.
    • Journal Title

      Mol.Biol.Evol 20

      Pages: 351-361

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Female-specific wing degeneration caused by ecdysteroid in the tussock moth, Orgyia recens : Hormonal and developmental regulation of sexual dimorphism formation.2003

    • Author(s)
      Lobbia, S., Niitsu, K., Fujiwara, H
    • Journal Title

      J.Insect Science (insectscience.org/3.11) 3 : 11 (on line journal).

      Pages: 1-7

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] cDNA cloning and mRNA expression of L-3, 4-dihydroxyphenylalanine decarboxylase gene homologue from the silkworm, Bombyx mori.2003

    • Author(s)
      Hwang JS, Kang SW, Goo TW, Yun EY, Lee JS, Kwon OY, Chun T, Suzuki Y, Fujiwara H.
    • Journal Title

      Biotechnol Lett. 25 (12)

      Pages: 997-1002

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Identification and characterization of the telomerase reverse transcriptase of Bombyx mori (silkworm) and Tribolium castaneum (flour beetle).

    • Author(s)
      Osanai, M., Kojima, K.K., Futahashi, R., Yaguchi, S., Fujiwara,H.
    • Journal Title

      Gene.

    • Description
      「研究成果報告書概要(和文)」より

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Published: 2007-12-13  

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