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2006 Fiscal Year Final Research Report Summary

Stark Spectroscopy and Reaction Dynamics in a Single Cell

Research Project

Project/Area Number 16072201
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Science and Engineering
Research InstitutionHokkaido University

Principal Investigator

OHTA Nobuhiro  Hokkaido University, Research Institute for Electronic Science, Professor (70113529)

Co-Investigator(Kenkyū-buntansha) NAKABAYASHI Takakazu  HOKKAIDO UNIVERSITY, Research Institute for Electronic Science, Associate Professor (30311195)
IIMORI Toshifumi  HOKKAIDO UNIVERSITY, Research Institute for Electronic Science, Assistant Professor (60360947)
KINJO Masataka  HOKKAIDO UNIVERSITY, Faculty of Advanced Life Science, Professor (70177971)
Project Period (FY) 2004 – 2006
KeywordsSingle Living Cell / Fluorescence Lifetime Imaging / Electric Field Effect / Time-Resolved Emission / Cell Stress / Proton-Ion Concentration
Research Abstract

Fluorescence lifetime images of HeLa cells expressing GFP-tudor fusion protein have been continuously measured. The lifetime image displays a uniform distribution throughout cells; however, the cells exhibit the decrease in fluorescence lifetime after the treatment with serum-free medium and exposure to normal air. These results indicate that the fluorescence lifetime becomes shorter under the stress. The change in fluorescence lifetime in living cells has been attributed to a change in local electric field produced in the protein cavity surrounding the GFP chromophore. To investigate the electric field effects on the photoexcitation dynamics of GFP, field-induced change in fluorescence lifetime of GFP was measured in PVA, and the fluorescence lifetime of GFP is found to be reduced by an electric field, suggesting that the electric field produced inside the protein cavity affects the fluorescence lifetime of GFP.
The fluorescence lifetime images in HeLa cells as well as in Halobacterium salinarum loaded with BCECF have been measured with varying intracellular pH. The results indicate that intracellular pH of a living cell can be evaluated in vivo by fluorescence lifetime imaging (FLIM).
Aggregates of the halobacteria are effectively formed by an electric field, but the local fields in halosbacteria remain unchanged even after the formation of the aggregates.

  • Research Products

    (46 results)

All 2008 2007 2006 2005 2004

All Journal Article (17 results) (of which Peer Reviewed: 3 results) Presentation (28 results) Book (1 results)

  • [Journal Article] Three-Dimensional High-resolution Microspectroscopic Study of Environment-Sensitive Photosynthetic Membranes2008

    • Author(s)
      S. Kumazaki, et al.
    • Journal Title

      Molecular Nano Dynamics, 2008, Wiley-VCH (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Three-Dimensional High-resolution Microspectroscopic Study of Environment-Sensitive Photosynthetic Membranes2008

    • Author(s)
      S. Kumazaki, et al.
    • Journal Title

      Energy from the Sun, J. Allen, E. Gantt, J. Golbeck, B. Osmond eds. (Springer) (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Soluble cytochrome c-554, CycA, is not essential for photosynthetic electron transfer in Chlorobium tepidum2008

    • Author(s)
      Y. Tsukatani, et al
    • Journal Title

      FEBS Lett (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] A Line-Scanning Semiconfocal Multiphoton Fluorescence Microscope with a Simultaneous Broadband Spectral Acquisition and its Application to the Study of the Thylakoid Membrane of a Cyanobacterium Anabaena PCC7120.2007

    • Author(s)
      S. Kumazaki, et al
    • Journal Title

      J. Microsc. 228

      Pages: 240-254

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Crystal Structures of CbiL, a Methyltransferase Involved in Anaerobic Vitamin B12 Biosynthesis, and its Complex with S-adenosylhomocysteine : Implications for the Reaction Mechanism2007

    • Author(s)
      K. Wada, et al.
    • Journal Title

      FEBS Journal 274

      Pages: 563-573

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] External Electric Field Effects on Fluorescence of Pyrene Butyric Acid Doped in a Polymer Film : Concentration and Temperature Dependence2006

    • Author(s)
      A. M. Ara, T. Iimori, T. Yoshizawa, T. Nakabayashi, ^*N. Ohta
    • Journal Title

      J. Phys. Chem. B 110

      Pages: 23669-23677

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Electric-Field-Induced Changes in Absorption and Emission Spectra of CdS Nanoparticles Doped in a Polymer Film2006

    • Author(s)
      Y. Ohara, T. Nakabayashi, K. Iwasaki, T. Torimoto, B. Ohtani, T. Hiratanai, K. Konishi, N. Ohta
    • Journal Title

      J. Phys. Chem. B 110

      Pages: 20927-20936

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Electroabsorption Spectroscopy of 6-hydroxyquinoline Doped in Polymer Films : Stark Shifts and Orientation Effects2006

    • Author(s)
      M. S. Mehata, T. Iimori, T. Yoshizawa, ^*N. Ohta
    • Journal Title

      J. Phys. Chem. A 110

      Pages: 10985-10991

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Cloning and Characterization of a Novel Gene Involved in Nitrogen Fixation in Heliobacterium Chlorum : a Possible Regulatory Gene2006

    • Author(s)
      J. Enkh-Amgalan, et al.
    • Journal Title

      Arch. Microbiol. 186

      Pages: 327-337

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Crystal Structure of BchU, a Methyltransferase Involved in Bacteriochlorophyll c Biosynthesis, and its Complex with S-adenosylhomocystein : Implications for Reaction Mechanism2006

    • Author(s)
      K. Wada, et al.
    • Journal Title

      J. Mol. Biol. 360

      Pages: 839-849

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] ESR Signal of the Iron-sulfur Center FX and its Function in the Homodimeric Reaction Center of Heliobacterium Modesticaldum2006

    • Author(s)
      R. Miyamoto, et al.
    • Journal Title

      Biochemistry 45

      Pages: 6306-6316

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Entropy rectifies the Brownian steps of kinesin2005

    • Author(s)
      Y.Taniguchi, et al.
    • Journal Title

      Nature Chemical Biology 1

      Pages: 342-347

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Different sensitivities to oxygen between two strains of the photosynthetic green sulfur bacterium Chlorobium vibrioforme NCIB 8327 with bacteriochlorophyll c and d2005

    • Author(s)
      J. Harad, et al.
    • Journal Title

      Photosynth. Res. 86

      Pages: 137-143

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Crystallization and preliminary X-ray diffraction study of methyltransferase BchU involved in bacteriochlorophyll c biosynthesis2005

    • Author(s)
      J. Harada, et al.
    • Journal Title

      Acta Crystallographica F61

      Pages: 712-714

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Determination of stereochemistry of bacteriochlorophyll-g_F and 8^1-hydroxy-chlorophyll -a_F from Heliobacterium modesticaldum2005

    • Author(s)
      T. Mizoguchi, et al.
    • Journal Title

      Photochem. Photobiol. 8

      Pages: 666-673

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] In vitro activity of C-20 methyltransferase, BchU, involved in bacteriochlorophyll c biosynthetic pathway in green sulfur bacteria2005

    • Author(s)
      J. Harada, et al.
    • Journal Title

      FEBS Lett. 579

      Pages: 1983-1987

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Function of a PscD subunit in a homodimeric reaction center complex of the photosynthetic green sulfur bacterium Chlorobium tepidum studied by insertional gene inactivation : Regulation of energy transfer and ferredoxin-mediated NADP^+ reduction on the cytoplasmic side2004

    • Author(s)
      Y. Tsukatani, et al.
    • Journal Title

      J. Biol. Chem. 279

      Pages: 51122-51130

    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Micro-regulation of oxygenic photosynthesis unveiled by fluorescence microspectroscopy2007

    • Author(s)
      Shigeichi Kumazaki (Invited)
    • Organizer
      The 67th Okazaki Conference, Molecular Science and Chemical Biology of Biomolecular Function
    • Place of Presentation
      Okazaki, Japan
    • Year and Date
      20071110-20071112
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] A Line-Scanning Semiconfocal Multiphoton Fluorescence Microscope with a Simultaneous Broadband Spectral Acquisition and its Application to the Study of the Thylakoid Membrane of a Cyanobacterium2007

    • Author(s)
      S. Kumazaki, et al.
    • Organizer
      State transition
    • Place of Presentation
      London, United Kingdom
    • Year and Date
      20070728-20070801
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] A Line-Scanning Multiphoton Fluorescence Spectromicroscope Applied to the Study of the Thylakoid Membrane in Cyanobacteria and Chloroplasts2007

    • Author(s)
      S. Kumazaki, et al.
    • Organizer
      14th International Congress of Photosynthesis
    • Place of Presentation
      Glasgow, Scotland
    • Year and Date
      20070723-20070727
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Detection of quinone function in the homodimeric type-I reaction center of Heliobacterium modesticaldum2007

    • Author(s)
      T. Kondo, et al.
    • Organizer
      14^<th> International Congress of Photosynthesis
    • Place of Presentation
      Glasgow, Scotland
    • Year and Date
      20070723-20070727
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Bifurcated electron donations from quinol oxidoreductase and soluble CycA to cytochrome c_z of the photosynthetic reaction center complex in the green sulfur bacterium Chlorobium2007

    • Author(s)
      C. Azai, et al.
    • Organizer
      14^<th> International Congress of Photosynthesis
    • Place of Presentation
      Glasgow, Scotland
    • Year and Date
      20070723-20070727
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] The Heme-containing portion of cytochrome c_z from Chlorobium tepidum : Its over-expression in Escherichia coli and spectroscopic studies2007

    • Author(s)
      H. Oh-oka, et al.
    • Organizer
      14^<th> International Congress of Photosynthesis
    • Place of Presentation
      Glasgow, Scotland
    • Year and Date
      20070723-20070727
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Compositional alternation of bacteriochlorophyll a derivatives and carotenoid species localized in RC-LH1 core complex, LH2 and LH4 of the purple bacterium, Rhodopseudomonas sp. strain Rits, under various light intensity2007

    • Author(s)
      J. Harada, et al.
    • Organizer
      Satellite Meeting : Light-harvesting Systems Workshop (LH2007)
    • Place of Presentation
      Glasgow, Scotland
    • Year and Date
      20070719-20070721
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] The effect of light intensity on composition of photosynthetic pigments in light-harvesting systems of the purple photosynthetic bacterium, Rhodopseudomonas sp. strain Rits2007

    • Author(s)
      J. Harada, et a.
    • Organizer
      The 3rd International Workshop on Supremolecular Nanoscience of Chemically Programmed Pigments
    • Place of Presentation
      Shiga, Japan
    • Year and Date
      20070611-20070613
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Microscopic Analysis of Kinesin-microtubule Complex under High Hydrostatic Pressure2007

    • Author(s)
      M. Nishiyama, et al.
    • Organizer
      51st Annual Meeting of the Biophysical Society
    • Place of Presentation
      Baltimore, USA
    • Year and Date
      20070303-20070307
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] How Does High Pressure Affect on the Bacterial Motility?2006

    • Author(s)
      M. Nishiyama, et a.
    • Organizer
      5th East Asian Biophysics Symposium & 44th Annual Meeting of the Biophysical Society of Japan
    • Place of Presentation
      Okinawa, Japan
    • Year and Date
      20061112-20061116
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Development of a High-pressure Microscope and its Applicatiion to Biological Systems2006

    • Author(s)
      M. Nishiyama, et al.
    • Organizer
      Micro-NanoMechatronics and Human Science, 2006 IEEE International Symposium
    • Place of Presentation
      Nagoya, Japan
    • Year and Date
      20061106-20061108
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Development of a High-pressure Microscope and its Applicatiion to Kinesin-microtubule Complex2006

    • Author(s)
      M. Nishiyama, et al.
    • Organizer
      2006 Biophysical Discussions "Molecular Motors : Point Counterpoint"
    • Place of Presentation
      Asilomar, USA
    • Year and Date
      20061019-20061022
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Electric Field Effects on Photoluminescence and Photofunction of Materials2006

    • Author(s)
      N. Ohta
    • Organizer
      International Symposium on Molecular Photonics, Devoted to the memory of acad. A. N. Trenin
    • Place of Presentation
      St. Petersburg, Russia
    • Year and Date
      20060628-20060702
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Single Molecule Analysis of Stepwise Movement of ATP-driven Molecular Motors2006

    • Author(s)
      M. Nishiyama, et al.
    • Organizer
      Tamura Symposium, Frontiers in Dynamics : Physical and Biological Systems
    • Place of Presentation
      Tokyo, Japan
    • Year and Date
      20060521-20060524
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Time-resolved Measurements of External Electric Field Effects on Fluorescence of Electron Donor-acceptor Pairs : N-ethylcarbazole and Dimethylterephthalate Doped in a Polymer Film2006

    • Author(s)
      T. Iimori, T. Yoshizawa, T. Nakabayashi, N. Ohta
    • Organizer
      XXIst IUPAC symposium on photochemistry
    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      20060402-20060407
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Electric Field Effects on Fluorescence and the Relation to Dynamics in Molecular System and in Biological System2006

    • Author(s)
      N. Ohta
    • Organizer
      The Seminar at National Chiao Tung University
    • Place of Presentation
      Hsinchu, Taiwan
    • Year and Date
      2006-11-17
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Methylation at the meso-position of chlorophylls by C20-methyltransferase of photosynthetic green sulfur bacteria2005

    • Author(s)
      H. Tamiaki, et al.
    • Organizer
      Pacichem2005
    • Place of Presentation
      Hawaii, USA
    • Year and Date
      20051215-20051220
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Structural basis for the methylation mechanism in methyltransferase BchU involved in bacteriochlorophyll c biosynthesis2005

    • Author(s)
      K. Wada, et al.
    • Organizer
      XX Congress of the International Union of Crystallography
    • Place of Presentation
      Florence, Italy
    • Year and Date
      20050823-20050831
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] A key enzyme of biosynthesis between bacteriochlorophyll c and d, BchU, derived from the photosynthetic green sulfur bacterium Chlorobium tepidum2005

    • Author(s)
      J. Harada, et al.
    • Organizer
      Second International Workshop on Supremolecular Nanoscience of Chemically Programmed Pigments
    • Place of Presentation
      Shiga, Japan
    • Year and Date
      20050616-20050618
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Stepping kinetics of kinesin motors is described by load-dependent Michaelis constant2005

    • Author(s)
      M. Nishiyama, et al.
    • Organizer
      Biophysical Society 49th Annual meeting
    • Place of Presentation
      Long Beach, USA
    • Year and Date
      20050212-20050216
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Energy transfer and charge separation dynamics in chlorophyll d-based Photosystem I from Acaryochloris marina2004

    • Author(s)
      S. Kumazaki, et al.
    • Organizer
      13th International Congress on Photosynthesis
    • Place of Presentation
      Montreal, Canada
    • Year and Date
      20040829-20040903
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] The function of the PscD subunit of the photosynthetic reaction center complex in Chlorobium tepidum2004

    • Author(s)
      Y. Tsukatani, et al.
    • Organizer
      13th International Congress on Photosynthesis
    • Place of Presentation
      Montreal, Canada
    • Year and Date
      20040829-20040903
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Spectroscopic studies of electron transfer reactions in membranes and isolated reaction center from Heliobacterium modesticaldum2004

    • Author(s)
      H. Oh-oka, et al.
    • Organizer
      13th International Congress on Photosynthesis
    • Place of Presentation
      Montreal, Canada
    • Year and Date
      20040829-20040903
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Natural reverse mutations of the inactivated bchU gene in Chlorobium vibrioforme NCIB 83272004

    • Author(s)
      J. Harada, et al.
    • Organizer
      13th International Congress on Photosynthesis
    • Place of Presentation
      Montreal, Canada
    • Year and Date
      20040829-20040903
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] In Vitro Enzymatic Activity of C-20 Methyltransferase, BchU, in the Bacteriochlorophyll c Biosynthetic Pathway2004

    • Author(s)
      J. Harada, et al.
    • Organizer
      13th International Congress on Photosynthesis Satellite Workshop : Photosynthetic Light-Harvesting Systems
    • Place of Presentation
      Sainte-Adele. Canada
    • Year and Date
      20040826-20040829
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Enzymatic activity of C-20 methyltransferase, BchU, involved in biosynthesis of bacteriochlorophyll c2004

    • Author(s)
      J. Harada, et al.
    • Organizer
      International Workshop on Supremolecular Nanoscience of Chemically Programmed Pigments
    • Place of Presentation
      Kusatsu, Japan
    • Year and Date
      20040616-20040618
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] The electron transfer pathway in heliobacterial reaction center : Reinvestigation by a combination of the spectroscopic methods and 3-D structural modeling2004

    • Author(s)
      H. Oh-oka, et al.
    • Organizer
      International Workshop on Supremolecular Nanoscience of Chemically Programmed Pigments
    • Place of Presentation
      Kusatsu, Japan
    • Year and Date
      20040616-20040618
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Elucidation of stereochemistry of bacteriochlorophyll-g_F and 8^1-hydroxy-chlorophyll-a_F from Heliobacterium modesticaldum2004

    • Author(s)
      T. Mizoguchi, et al.
    • Organizer
      International Worksnop on Supremolecular Nanoscience of Chemically Programmed Pigments
    • Place of Presentation
      Kusatsu, Japan
    • Year and Date
      20040616-20040618
    • Description
      「研究成果報告書概要(欧文)」より
  • [Book] 新実験化学講座・物質の構造I, 分光(上)2005

    • Author(s)
      太田,信廣
    • Total Pages
      327-362
    • Publisher
      丸善株式会社
    • Description
      「研究成果報告書概要(和文)」より

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Published: 2010-06-09  

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