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2005 Fiscal Year Final Research Report Summary

Manipulation of Genes in the Cell Using Glycoviruses and Signal-Amplifying Probes

Research Project

Project/Area Number 16350087
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Chemistry related to living body
Research InstitutionKyoto University

Principal Investigator

AOYAMA Yasuhiro  Kyoto University, Graduate School of Engineering, Professor, 工学研究科, 教授 (00038093)

Co-Investigator(Kenkyū-buntansha) SANDO Shinsuke  Kyoto University, Graduate School of Engineering, Research Associate, 工学研究科, 助手 (20346084)
Project Period (FY) 2004 – 2005
Keywordsglycovirus / cerasome / riboregulator / gene delivery / gene sensing / molecular beacon / read-through / sense codon
Research Abstract

1.Gene Delivery Using Glycoviruses
The viral size of 〜50nm was found to be best for cellular uptake. We found glycoviruses having three galactose moieties fulfill this requirement.
2.Gene Delivery Using Cerasomes.
Cerasomes (ceramic-coated liposomes) turned out to be free from fusion when binding to DNA and can thus be used as an excellent, viral size-keeping gene carrier.
3.Gene Sensing using Riboregulator
Molecular beacon-type riboregulator probes express particular reporter protein in the presence of a particular gene as a target and can thus be used as a signal-amplifying gene sensor.
4.Genotype-Phenotype Coupling
We devised a read-through ribosome-display strategy, thereby tagging the expressed protein with the mRNA that codes the former.
5.Sense Codon Suppression with Nonnatural Amino Acids
We found a simple method to introduce a nonnatural amino acid into sense codon using an inhibitor of the aminoacyl-tRNA synthetase.

  • Research Products

    (21 results)

All 2006 2005 Other

All Journal Article (18 results) Patent(Industrial Property Rights) (3 results)

  • [Journal Article] Visible Sensing of Nucleic Acid Sequences with a Genetically Encodable Unmodified RNA Probe2006

    • Author(s)
      A.Narita, K.Ogawa, S.Sando, Y.Aoyama
    • Journal Title

      Angew. Chem. Int. Ed. 45

      Pages: 2879-2883

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Cerasome as an Infusible, Cell-Friendly, and Serum-Compatible Transfection Agent in a Viral Size2006

    • Author(s)
      K.Matsui, S.Sando, T.Sera, Y.Aoyama, Y.Sasaki, T.Komatsu, T.Terashima, J.Kikuchi
    • Journal Title

      J.Am.Chem.Soc. 128

      Pages: 3114-3115

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Termination-Free Prokaryotic Protein Translation by Using Anticodon-Adjusted E. coli tRNASer as Unified Suppressors of the UAA/UGAUAG Stop Codons. Read-Through Ribosome Display of Full-Length DHFR with Translated UTR as a Buried Spacer Arm2006

    • Author(s)
      A.Ogawa, S.Sando, Y.Aoyama
    • Journal Title

      Chem Bio Chem 7

      Pages: 249-252

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] RNAi Silencing of Exogenous and Endogenous Reporter Genes Using a Macrocyclic Octaamine as a Compact" siRNA Carrier. Studies on the Nonsilenced Residual Activity2006

    • Author(s)
      K.Matsui, S.Horiuchi, S.Sando, T.Sera, Y.Aoyama
    • Journal Title

      Bioconjugate Chem. 17

      Pages: 132-138

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Visible Sensing of Nucleic Acid Sequences with a Genetically Encodable Unmodified RNA Probe2006

    • Author(s)
      A.Narita, K.Ogawa, S.Sando, Y.Aoyama
    • Journal Title

      Angew.Chem.Int.Ed. 45

      Pages: 2879-2883

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Termination-Free Prokaryotic Protein Translation by Using Anticodon-Adjusted E.coli tRNASer as Unified Suppressors of the UAA/UGAUAG Stop Codons. Read-Through Ribosome Display of Full-Length DHFR with Translated UTR as a Buried Spacer Arm2006

    • Author(s)
      A.Ogawa, S.Sando, Y.Aoyama
    • Journal Title

      ChemBioChem 7

      Pages: 249-252

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] A Small-Molecule-Based Approach to Snse Codon-Templated Natural-Unnatural Hybrid Peptides. Slective Silencing and Reassignment of the Sense Codon by Orthogonal Reacylation Stalling at the Single-Codon Level2005

    • Author(s)
      S.Sando, K.Kanatani, N.Sato, H.Matsumoto, T.Hohsaka, Y.Aoyama
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 7998-7999

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Doubly Catalytic Sensing of HIV-1-Related CCR5 Sequence in Prokaryotic Cell-Free Translation System Using Riboregulator-Controlled Luciferase Activity2005

    • Author(s)
      S.Sando, A.Narita, K.Abe, Y.Aoyama
    • Journal Title

      J. Am. Chem. Soc. 127

      Pages: 5300-5301

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Locked TASC Probes for Homogeneous Sensing of Nucleic Acids and Imaging of Fixed E-coli Cells2005

    • Author(s)
      S.Sando, A.Narita, T.Sasaki, Y.Aoyama
    • Journal Title

      Org. Biomolec. Chem. 3

      Pages: 1002-1007

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] A Simple Approach to Sense Codon-Tmplated Synthesis of Natural/Unnatural Hybrid Peptides2005

    • Author(s)
      K.Kanatani, S.Sando, Y.Aoyama
    • Journal Title

      Nucleic Acids Symp. Seties 49

      Pages: 265-266

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] In Vitro Selection of RNA Aptamers for the Escherichia coli Release Factor 12005

    • Author(s)
      A.Ogawa, T.Nishi, S.Sando, Y.Aoyama
    • Journal Title

      Nucleic Acids Symp. Seties 49

      Pages: 269-270

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Highly Sensitive Genotyping Using Artificial Riboregulator System2005

    • Author(s)
      A.Narita, K.Ogawa, S.Sando, Y.Aoyama
    • Journal Title

      Nucleic Acids Symp. Seties 49

      Pages: 271-272

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] A Small-Molecule-Based Approach to Snse Codon-Templated Natural-Unnatural Hybrid Peptides. Slective Silencing and Reassignment of the Sense Codon by Orthogonal Reacylation Stalling at the Single-Codon Level2005

    • Author(s)
      S.Sando, K.Kanatani, N.Sato, H.Matsumoto, T.Hohsaka, Y.Aoyama
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 7998-7999

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Doubly Catalytic Sensing of HIV-1-Related CCR5 Sequence in Prokaryotic Cell-Free Translation System Using Riboregulator-Controlled Luciferase Activity2005

    • Author(s)
      S.Sando, A.Narita, K.Abe, Y.Aoyama
    • Journal Title

      J.Am.Chem.Soc. 127

      Pages: 5300-5301

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Locked TASC Probes for Homogeneous Sensing of Nucleic Acids and Imaging of Fixed E-coli Cells2005

    • Author(s)
      S.Sando, A.Narita, T.Sasaki, Y.Aoyama
    • Journal Title

      Org.Biomolec.Chem. 3

      Pages: 1002-1007

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] A Simple Approach to Sense Codon-Tmplated Synthesis of Natural/Unnatural Hybrid Peptides2005

    • Author(s)
      K.Kanatani, S.Sando, Y.Aoyama
    • Journal Title

      Nucleic Acids Symp.Seties 49

      Pages: 265-266

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] In Vitro Selection of RNA Aptamers for the Escherichia coli Release Factor 12005

    • Author(s)
      A.Ogawa, T.Nishi, S.Sando, Y.Aoyama
    • Journal Title

      Nucleic Acids Symp.Seties 49

      Pages: 269-270

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Highly Sensitive Genotyping Using Artificial Riboregulator System2005

    • Author(s)
      A.Narita, K.Ogawa, S.Sando, Y.Aoyama
    • Journal Title

      Nucleic Acids Symp.Seties 49

      Pages: 271-272

    • Description
      「研究成果報告書概要(欧文)」より
  • [Patent(Industrial Property Rights)] タンパク質の表示方法

    • Inventor(s)
      青山安宏, 山東信介, 小川敦司
    • Industrial Property Number
      特願2005-145194, 国際出願PCT/JP2005/018680
    • Description
      「研究成果報告書概要(和文)」より
  • [Patent(Industrial Property Rights)] 非天然アミノ酸含有及び/又はヒドロキシ酸含有有機化合物の製造方法(センスコドンへの非天然アミノ酸の導

    • Inventor(s)
      青山安宏, 山東信介, 金谷啓一郎
    • Industrial Property Number
      特願 2005-065315.
    • Description
      「研究成果報告書概要(和文)」より
  • [Patent(Industrial Property Rights)] 遺伝子検出試薬及びその利用法(リボレギュレーターを用いた遺伝子診断法)

    • Inventor(s)
      青山安宏, 山東信介, 成田敦
    • Industrial Property Number
      特願2005-043104.
    • Description
      「研究成果報告書概要(和文)」より

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Published: 2007-12-13  

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