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2006 Fiscal Year Final Research Report Summary

Studies on self-assembling peptides containing novel amino acids with hetero-rings in side-chains

Research Project

Project/Area Number 16550152
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Chemistry related to living body
Research InstitutionKonan University

Principal Investigator

YAMADA Takashi  Konan University, Faculty of Science and Engineering, Professor, 理工学部, 教授 (00068123)

Project Period (FY) 2004 – 2006
Keywordsα, α-disubstituted glycine / α, α-di(2-pyridyl)glycine / α-phenyl-α-(2-pyridyl)glycine / amino acids with hetero-rings / separation of diastereomers / CD spectra / analysis of chirality / self-assembling peptides
Research Abstract

In this research project, we have intended to develop new self-assembling peptides containing novel α,α-disubstituted glycines with hetero-rings, and investigated synthesis, conformation and Cu-complex formation of various peptides containing novel α, α-disubstituted glycines with hetero-rings, α, α-di(2-pyridyl)glycine (2Dpy), α-phenyl-α-(2-pyridyl)glycine (2Ppg), α-methyl-α-(2-pyridyl)glycine (2Pmg), α-methyl-α-(2-pyrazyl)glycine (2Pzm) and α-methyl-α-(2-thiazolyl)glycine (2Tmg).
1.Tripeptides (Z-AA_1-2Dpy/2Ppg-AA_3-OMe) containing 2Dpy and 2Ppg were synthesized by the Ugi reaction. NMR analysis revealed these peptides adopt a novel conformation in which each nitrogen atom of pyridine rings forms an intramolecular hydrogen bond with a hydrogen atom of an amide bond.
2.The tripeptides containing 2Dpy were synthesized by the solid-phase Ugi reaction. By this method, yields of these peptides were markedly improved, compared with yields by the solution method.
3.Tripeptides containing 2Pmg … More were first synthesized by the solid-phase Ugi reaction. These tripeptides adopt a unique conformation with an intramolecular hydrogen bond between 2Pmg-NH and the pyridine nitrogen.
4.The 2Dpy-containing tripeptides afforded the 2:1 complex with Cu(II) ion, and the crystal structure was clarified by X-ray analysis. Further, ESR spectrum of the complex was also studied.
5.A hexapeptide containing two 2Dpy residues was synthesized. The peptide adopts an extended conformation with four intramolecular hydrogen bonds between 2Dpy-NH and a pyridine nitrogen. Complex formation of the peptide with metal ions will be investigated.
6.Chirality of 2Ppg in peptides was investigated by synthesis of tri-and tetrapeptides containing 2Ppg followed by separation of the diastereomers and X-ray crystal analysis, and measurement of CD spectra.
7.Tripeptides, Z-AA_1-(N-Bzl)Xaa-AA_3-OMe (Xaa=2Pzm,2Tmg), containing other hetero-rings were synthesized by the Ugi reaction. In both peptides, the intramolecular hydrogen bonding between a pyrazine nitrogen and AA_3-NH and between a thiazole nitrogen and AA_3-NH, respectively, were observed. Stabilities of the intramolecular hydrogen bonding by a pyridine nitrogen, a thiazole nitrogen and a pyrazine nitrogen are compared. Less

  • Research Products

    (22 results)

All 2006 2005 2004

All Journal Article (22 results)

  • [Journal Article] Synthesis and conformational study of tripeptides containing α,α-disubstituted glycine having hetero-aromatic ring (2)2006

    • Author(s)
      山田隆己
    • Journal Title

      Peptide Science 2005

      Pages: 385-388

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Comparison of conformations of tetrapeptide diastereomers containing α-phenyl-α-(2-pyridyl)glycine2006

    • Author(s)
      山田隆己
    • Journal Title

      Peptide Science 2006

      Pages: 89-90

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Synthesis and conformational study of tripeptides containing α,α-disubstituted glycine having hetero-aromatic ring (2)2006

    • Author(s)
      T.Yamada
    • Journal Title

      Peptide Science 2005

      Pages: 385-388

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Comparison of conformations of tetrapeptide diastereomers containing α-phenyl-α-(2-pyridyl)glycine2006

    • Author(s)
      T.Yamada
    • Journal Title

      Peptide Science 2006

      Pages: 89-90

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Studies on intramolecular hydrogen bonding between the pyridine nitrogen and the amide hydrogen of the peptide : synthesis and conformational analysis of tripeptides containing novel amino acids with a pyridine ring2005

    • Author(s)
      破入正行
    • Journal Title

      Journal Peptide Science 11

      Pages: 491-498

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Synthesis and conformational studies of diastereomers of tri- and tetrapeptides containing α-phenyl-α-(2-pyridyl)glycine2005

    • Author(s)
      山田隆己
    • Journal Title

      Peptides 2004

      Pages: 1089-1090

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Amino acid ester salt recognition by ferrocene-based ditopic receptor bearing oligoethylene glycol with pendant bipy subunits : CV, UV-vis and ESR studies2005

    • Author(s)
      村嶋貴之
    • Journal Title

      Organic Biomolecular Chemistry 3

      Pages: 4060-4064

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Complexation behavior of the metal ions with peptides containing α,α-di(2- pyridyl)glycine (2Dpy)2005

    • Author(s)
      破入正行
    • Journal Title

      Peptide Science 2004

      Pages: 391-392

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Synthesis and conformational study of tetrapeptides diastereomers containing α-phenyl-α-(2-pyridyl)glycine2005

    • Author(s)
      山田隆己
    • Journal Title

      Peptide Science 2004

      Pages: 475-478

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Synthesis and conformational study of tripeptides containing α,α-disubstituted glycine having hetero-aromatic ring2005

    • Author(s)
      山田隆己
    • Journal Title

      Peptide Science 2004

      Pages: 583-586

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Studies on intramolecular hydrogen bonding between the pyridine nitrogen and the amide hydrogen of the peptide : synthesis and conformational analysis of tripeptides containing novel amino acids with a pyridine ring2005

    • Author(s)
      M.Hanyu
    • Journal Title

      J.Peptide Sci. 11

      Pages: 491-498

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Synthesis and conformational studies of diastereomers of tri-and tetrapeptides containing α-phenyl-α-(2-pyridyl)glycine2005

    • Author(s)
      T.Yamada
    • Journal Title

      Peptides 2004

      Pages: 1089-1090

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Amino acid ester salt recognition by ferrocene-based ditopic receptor bearing oligoethylene glycol with pendant bipy subunits : CV, UV-vis and ESR studies2005

    • Author(s)
      T.Murashima
    • Journal Title

      Org.Biomol.Chem. 3

      Pages: 4060-4064

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Complexation behavior of the metal ions with peptides containing α,α-di(2- pyridyl)glycine (2Dpy)2005

    • Author(s)
      M.Hanyu
    • Journal Title

      Peptide Science 2004

      Pages: 391-392

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Synthesis and conformational study of tetrapeptides diastereomers containing α- phenyl-α-(2-pyridyl)glycine2005

    • Author(s)
      T.Yamada
    • Journal Title

      Peptide Science 2004

      Pages: 475-478

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Synthesis and conformational study of tripeptides containing α,α-disubstituted glycine having hetero-aromatic ring2005

    • Author(s)
      T.Yamada
    • Journal Title

      Peptide Science 2004

      Pages: 583-586

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] A novel intramolecular hydrogen bonding between a side-chain pyridine ring and an amide hydrogen of the peptide backbone in tripeptides containing the new amino acid, α,α-di(2-pyridyl)glycine2004

    • Author(s)
      山田隆己
    • Journal Title

      Organic Biomolecular Chemistry 2

      Pages: 2335-2339

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Metal ion-binding ability of tetrapeptides containing α-aminoisobutyric acid2004

    • Author(s)
      破入正行
    • Journal Title

      Journal Peptide Science 10

      Pages: 149-159

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Synthesis of tripeptides containing a very crowded α,α-disubstituted glycine with pyridine rings by solid-phase Ugi reaction2004

    • Author(s)
      破入正行
    • Journal Title

      Tetrahedoron Letters 45

      Pages: 8871-8874

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] A novel intramolecular hydrogen bonding between a side-chain pyridine ring and an amide hydrogen of the peptide backbone in tripeptides containing the new amino acid, a, a-di(2-pyridyl)glycine2004

    • Author(s)
      T.Yamada
    • Journal Title

      Org.Bimol.Chem. 2

      Pages: 2335-2339

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Metal ion-binding ability of tetrapeptides containing a-aminoisobutyric acid2004

    • Author(s)
      M.Hanyu
    • Journal Title

      J.Peptide Sci. 10

      Pages: 149-159

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Synthesis of tripeptides containing a very crowded a, a-disubstituted glycine with pyridine rings by solid-phase Ugi reaction2004

    • Author(s)
      M.Hanyu
    • Journal Title

      Tetrahedron Lett. 45

      Pages: 8871-8874

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2008-05-27  

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