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2007 Fiscal Year Final Research Report Summary

Development of a Time Correlation Spectroscopy for Liquid Phase Reactions using a Liquid Micro Jet in Combination with a Synchrotron Radiation

Research Project

Project/Area Number 17204035
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics/Chemical physics
Research InstitutionTokyo University of Agriculture and Technology

Principal Investigator

UKAI Masatoshi  Tokyo University of Agriculture and Technology, Institute of Symbiotic Science and Technology, Associate Professor (80192508)

Co-Investigator(Kenkyū-buntansha) YOKOYA Akinari  Japan Atomic Energy Agency, Advanced Science Research Center, Principal Scientist (10354987)
Project Period (FY) 2005 – 2007
Keywordssynchrotron radiation / liquid micro jet / photoelectron Spectroscopy / time correlation spectroscopy / bio-molecules / dynamics of superexcited molecules / hydration netword / self assembled repair of radiation damage
Research Abstract

The objective of the present research has been the development of a new spectroscopy for a new aspect of production and restoration of radiation damage, which has been attempted by bridging the different background of the head investigator and the main collaborating investigator in atomic and molecular spectroscopy in gas phase and the radiation interaction with bio-molecules in wet systems, respectively. We have intended the observation of the structures and the energy states of bio-functional molecules, which are determined by the hydration network surrounding them in water solution, by means of a liquid micro jet in vacuum in combination with an electron spectroscopy for chemical analysis employing a monochromatic synchrotron radiation excitation. This has been expected to facilitate the selective observation of initial (intact) structures and energies of the molecules with respect to the atomic elements, bonding site of particular atoms, and hydration with them by analyzing the kinetic energies of ejected photoelectrons. Ejection of such electrons is the signature of the site of the primary radiation interaction undergoing to relaxation to the final fixed damage. The intermediate species emerging specifically in particular time domains on the way to fixed damage are specified by the use of a mass spectrometry and an optical spectroscopy.
1. Thus, in the present work, we have developed the technique of generating a liquid micro jet to retain and stabilize liquid samples for a photoelectron spectroscopy in high vacuum. This has been achieved by improving the micro jet source and vacuum system.
2. We have also achieved development of both a reflectron type high-resolution time-of-flight mass spectrometer and an optical detection system in the visible to ultraviolet range for a time correlation spectroscopy with the photoelectron energy analysis. Improvement of the system of photoelectron spectroscopy for high precision measurement is also made in advance.

  • Research Products

    (48 results)

All 2008 2007 2006 2005

All Journal Article (20 results) (of which Peer Reviewed: 10 results) Presentation (28 results)

  • [Journal Article] X-ray absorption spectrum for guanosine-5'-monophosphate in water solution in the vicinity of the nitrogen K-edge observed in free liquid jet in vacuum2008

    • Author(s)
      Masatoshi Ukai
    • Journal Title

      Radiation Physics and Chemistry (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] DNA Damage induced by direct effect of radiation2008

    • Author(s)
      Akinari Yokoya
    • Journal Title

      Radiation Physics and Chemistry (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] LET dependence of the yield of single-, double-strand breaks and base lesions in fully hydrated plasmid DNA films by 4He^<2+> ion irradiation2008

    • Author(s)
      Ayumi Urushibara
    • Journal Title

      International Journal of Radiation Biology 84

      Pages: 23-33

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] X-ray absorption spectrum for guanosine-5'-monophosphate in water solution in the vicinity of the nitrogen K-edge observed in free liquid jet in vacuum2008

    • Author(s)
      M., Ukai
    • Journal Title

      Radiation Physics and Chemistry (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] DNA Damage induced by direct effect of radiation2008

    • Author(s)
      A., Yokoya
    • Journal Title

      Radiation Physics and Chemistry (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] LET dependence of the yield of single-, double-strand breaks and base lesions in fully hydrated plasmid DNA films by ^4He^<2+> ion irradiation2008

    • Author(s)
      A., Urushibara
    • Journal Title

      International Journal of Radiation Biology 84

      Pages: 23-33

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Yields of strand breaks and base lesions induced by soft X-rays in plasmid DNA2006

    • Author(s)
      Akinari Yokoya
    • Journal Title

      Radiation Protection Dosimetry 122

      Pages: 86-88

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] DNA damage induced direct effect of He ion particles2006

    • Author(s)
      Ayumi Urushibara
    • Journal Title

      Radiation Protection Dosimetry 122

      Pages: 163-165

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] クラスターDNA損傷の生物効果2006

    • Author(s)
      鹿園直哉
    • Journal Title

      放射線生物研究 49

      Pages: 409-423

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Yields of strand breaks and base lesions induced by soft X-rays in plasmid DNA2006

    • Author(s)
      A., Yokoya
    • Journal Title

      Radiation Protection Dosimetry 122

      Pages: 86-88

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] DNA damage induced direct effect of He ion particles2006

    • Author(s)
      A., Urushibara
    • Journal Title

      Radiation Protection Dosimetry 122

      Pages: 163-165

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Biological effects of cluster DNA damage (in Japanese)2006

    • Author(s)
      N., Shikazono
    • Journal Title

      Radiation Biological Research 49

      Pages: 409-423

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] First observation of natural circular dichroism for biomolecules in soft X-ray region studied with a polarizing undulator2005

    • Author(s)
      M. Tanaka
    • Journal Title

      Physica Scripta T115

      Pages: 873-876

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Chemical evolution of amino acid induced by soft X-ray with synchrotron radiation2005

    • Author(s)
      F. Kaneko
    • Journal Title

      Journal of Electron Spectroscopy and Related Phenomena 144-147

      Pages: 291-294

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Natural circular dichroism of amino acid films observed in soft X-ray and VUV region using polarizing undulator2005

    • Author(s)
      K. Nakagawa
    • Journal Title

      Journal of Electron Spectroscopy and Related Phenomena 144-147

      Pages: 271-273

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] 放射線によるクラスターDNA損傷の生成機構2005

    • Author(s)
      横谷明徳
    • Journal Title

      放射線生物研究 40

      Pages: 168-184

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] First observation of natural circular dichroism for biomolecules in soft X-ray region studied with a polarizing undulator2005

    • Author(s)
      M., Tanaka
    • Journal Title

      Physica Scripta T115

      Pages: 873-876

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Chemical evolution of amino acid induced by soft X-ray with synchrotron radiation2005

    • Author(s)
      F, Kaneko
    • Journal Title

      Journal of Electron Spectroscopy and Related Phenomena 144-147

      Pages: 291-294

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Natural circular dichroism of amino acid films observed in soft X-ray and VUV region using polarizing undulator2005

    • Author(s)
      K., Nakawgwa
    • Journal Title

      Journal of Electron Spectroscopy and Related Phenomena 144-147

      Pages: 271-273

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Production mechanism of cluster DNA damage (in Japanese)2005

    • Author(s)
      A., Yokoya
    • Journal Title

      Radiation Biological Research 40

      Pages: 168-184

    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] A Photoelectron Study for DNA and its Damages in Solution using Monochromatic Soft X-rays : Total and Partial Yields of Photoelectrons for Water and Nucleotides2008

    • Author(s)
      M., Ukai
    • Organizer
      10th Internation Workshop on Radiation Damage to DNA
    • Place of Presentation
      Ura-bandai, Fukushima, Japan
    • Year and Date
      20080600
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Are there any non-linear response of repair efficiencies to clustered DNA damage induced by direct effect of radiation?2007

    • Author(s)
      Akinari Yokoya
    • Organizer
      7th International Symposium on Advanced Science Research; Charged Particle and Photon Interaction with Matter
    • Place of Presentation
      Tokai-mura, Ibaraki, Japan
    • Year and Date
      20071106-09
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] X-ray absorption spectrum for nucleotides in water solutions near the nitrogen K-edge2007

    • Author(s)
      Masatoshi Ukai
    • Organizer
      7th International Symposium on Advanced Science Research; Charged Particle and Photon Interaction with Matter
    • Place of Presentation
      Tokai-mura, Ibaraki, Japan
    • Year and Date
      20071106-09
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Are there any non-linear response of repair efficiencies to clustered DNA damage induced by direct effect of radiation?2007

    • Author(s)
      A., Yokoya
    • Organizer
      7th International Symposium on Advanced Science Research ; Charged Particle and Photon Interaction with Matter
    • Place of Presentation
      Tokai-mura, Ibaraki, Japan
    • Year and Date
      20071100
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] X-ray absorption spectrum for nucleotides in water solutions near the nitrogen K-edge2007

    • Author(s)
      M., Ukai
    • Organizer
      7th International Symposium on Advanced Science Research ; Charged Particle and Photon Interaction with Matter
    • Place of Presentation
      Tokai-mura, Ibaraki, Japan
    • Year and Date
      20071100
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 水溶液ヌクレオチドの窒素K殻吸収端近傍吸収スペクトル2007

    • Author(s)
      鵜飼正敏
    • Organizer
      第1回分子科学討論会
    • Place of Presentation
      仙台
    • Year and Date
      20070917-20
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] X-ray absorption spectra near the Nitrogen K-edge for nuclueotides in water solution2007

    • Author(s)
      M., Ukai
    • Organizer
      1st Discussion Meeting on Molecular Structure
    • Place of Presentation
      Sendai, Miyagi, Japan
    • Year and Date
      20070900
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] X-ray absorption spectrum near the nitrogen K-edge for nucleotides in water solutions2007

    • Author(s)
      Masatoshi Ukai
    • Organizer
      15th International Conference on Vacuum Ultraviolet Radiation Physics
    • Place of Presentation
      Berlin, Germany
    • Year and Date
      20070729-0803
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] A novel technique using DNA denaturation to analyze clustered DNA damage sites induced by densely ionizing radiation2007

    • Author(s)
      Akinari Yokoya
    • Organizer
      13th International Congress of Radiation Resarch
    • Place of Presentation
      San Fransisco, USA
    • Year and Date
      20070708-12
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Studies of soft-X-ray-induced Auger effect on the induction of DNA damage(招待講演)2007

    • Author(s)
      Akinari Yokoya
    • Organizer
      6th Auger Symposium: An International Symposium on Physical, Molecular, Cellular, and Medical Aspects of Auger Processes
    • Place of Presentation
      Boston, USA
    • Year and Date
      20070705-07
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] A novel technique using DNA denaturation to analyze clustered DNA damage sites induced by densely ionizing radiation2007

    • Author(s)
      A., Yokoya
    • Organizer
      13th International Congress of Radiation Research
    • Place of Presentation
      San Francisco, USA.
    • Year and Date
      20070700
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Studies of soft-X-ray-induced Auger effect on the induction of DNA damage (invited)2007

    • Author(s)
      A., Yokoya
    • Organizer
      6th Auger Symposium : An International Symposium on Physical, Molecular, Cellular, and Medical Aspects of Auger Processes
    • Place of Presentation
      Boston, USA
    • Year and Date
      20070700
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 液体分子線を用いた水溶液状態にあるヌクレオチドの軟X線放射光分光研究2007

    • Author(s)
      鵜飼正敏
    • Organizer
      日本物理学会2007年春季大会
    • Place of Presentation
      鹿児島
    • Year and Date
      20070318-21
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] X-ray synchrotron radiation spectroscopy for nuclueotides in solution using a liquid water jet2007

    • Author(s)
      M., Ukai
    • Organizer
      2007 Annual Meeting of Japanese Physical Society
    • Place of Presentation
      Kagoshima, Japan
    • Year and Date
      20070300
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 水溶液ヌクレオチドの窒素K殻吸収端近傍XANES2007

    • Author(s)
      鵜飼正敏
    • Organizer
      第20回日本放射光学会年会・放射光科学合同シンポジウム
    • Place of Presentation
      広島
    • Year and Date
      20070112-14
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] XANES for nuclueotides in water solution near the Nitrogen K-edge2007

    • Author(s)
      M., Ukai
    • Organizer
      20th, Joint Annual Meeting of Japanese Society of Synchrotr on Radiation Research
    • Place of Presentation
      Hiroshima, Japan
    • Year and Date
      20070100
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] X-ray absorption spectra for nuclueotides in water solution in the vicinity of Nitrogen K-edge2006

    • Author(s)
      M., Ukai
    • Organizer
      49th Discussion Meeting of Radiation Chemistry
    • Place of Presentation
      Takasaki, Gumma, Japan
    • Year and Date
      20061100
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 窒素K殻吸収端近傍における水溶液ヌクレオチドのX線吸収スペクトル2006

    • Author(s)
      鵜飼正敏
    • Organizer
      第49回放射線化学討論会
    • Place of Presentation
      高崎
    • Year and Date
      20061012-14
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 生体溶液試料に対する軟X線放射線効果の分光研究(招待講演)2006

    • Author(s)
      鵜飼正敏
    • Organizer
      原子衝突研究協会第31回研究会
    • Place of Presentation
      岡崎
    • Year and Date
      20060810-11
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Spectroscopic study of radiation effects for bio-solution in thre region of soft X-ray (invited)2006

    • Author(s)
      M., Ukai
    • Organizer
      31th Annual Meeting of the Society of Atomic Collisions
    • Place of Presentation
      Okazaki, Aichi, Japan
    • Year and Date
      20060800
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 放射光・液体分子線分光法による水溶液ヌクレオチドの内殻吸収スペクトル2006

    • Author(s)
      鵜飼正敏
    • Organizer
      第22回化学反応討論会
    • Place of Presentation
      岡崎
    • Year and Date
      20060607-09
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Inner shell absorption spectra for nuclueotides in water solution using liquid water jet in combination with synchrotron radiation2006

    • Author(s)
      M., Ukai
    • Organizer
      22th Discussion Meeting of Chemical Dyanamics and Chemical Kinetics
    • Place of Presentation
      Okazaki, Aichi, Japan
    • Year and Date
      20060600
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] A Photoelectron Study for DNA and its Damages in Solution: Soft X-ray absorption spectra for nucleotides2006

    • Author(s)
      Masatoshi Ukai
    • Organizer
      9th International Workshop on Radiation Damage to DNA
    • Place of Presentation
      Tekirova, Antalya, Turkey
    • Year and Date
      20060513-17
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] A Photoelectron Study for DNA and its Damages in Solution : Soft X-ray absorption spectra for nucleotides2006

    • Author(s)
      M., Ukai
    • Organizer
      9th International Workshop on Radiation Damage to DNA
    • Place of Presentation
      Tekyrova, Antalya, Turkey
    • Year and Date
      20060500
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] シンクロトロン放射光電子分光法による溶液分子の研究2005

    • Author(s)
      鵜飼正敏
    • Organizer
      第48回放射線化学討論会
    • Place of Presentation
      大阪
    • Year and Date
      20051012-14
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Investigation of molecules in liquid solution using a synchrotron radiation photoelectron spectroscopy2005

    • Author(s)
      M., Ukai
    • Organizer
      48th Discussion Meeting of Radiation Chemistry
    • Place of Presentation
      Osaka, Japan
    • Year and Date
      20051000
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] シンクロトロン放射光励起・液体分子線分光法による水の光電子分光2005

    • Author(s)
      鵜飼正敏
    • Organizer
      第21回化学反応討論会
    • Place of Presentation
      吹田
    • Year and Date
      20050601-03
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Photoelectron spectrospectrum for water using a synchrotron radiation excited liquid jet spectroscopy2005

    • Author(s)
      M., Ukai
    • Organizer
      21th Discussion Meeting of Chemical Dyanamics and Chemical Kinetics
    • Place of Presentation
      Suita, Osaka, Japan
    • Year and Date
      20050600
    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2010-02-04  

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