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2007 Fiscal Year Final Research Report Summary

Mechanisms and Physiological Roles of Endoplacmic Reticulum Quality Control Regulated by Protein Glycosylation

Research Project

Project/Area Number 17370067
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Cell biology
Research InstitutionNagoya University

Principal Investigator

NISHIKAWA Shuh-ichi  Nagoya University, Graduate School of Science, Associate Professor (10252222)

Co-Investigator(Kenkyū-buntansha) ENDO Toshiya  Nagoya University, Graduate School of Science, Professor (70152014)
Project Period (FY) 2005 – 2007
KeywordsEndoplasmic Reticulum / Quality Control / Protein Glycosylation / Molecular Chaperone
Research Abstract

The endoplasmic reticulum (ER) is the entrance of the secretory pathway in eukaryotic cells. Secretory and membrane proteins undergo folding and various modification processes before they are exported to the Golgi apparatus. Quality control mechanisms in the ER monitor these processes to ensure that defective proteins that failed to acquire correct functional structures are not deployed throughout the cells. Misfolded proteins retained in the ER are degraded by a mechanism called endoplasmic reticulum-associated degradation (ERAD) . The aim of our research is to elucidate mechanisms of the ER quality control system mediated by carbohydrate modification of proteins using budding yeast and Arabidopsis thaliana.
Yeast Mnllp is a mannosidase family protein in the ER and is proposed to function in the substrate recognition in the ERAD of misfolded glycoproteins. We found that Mnllp forms a complex with protein disulfide isomerase (PDI) through disulfide bonds. Analyses using mutants of Mnllp … More and PDI showed that the Mnll p-PDI interaction is important for ERAD. To analyze relationships between protein folding and carbohydrate modification in substrate recognition in ERAD, we developed new ERAD substrates using CPY*, a widely used ERAD substrate in yeast. Analyses using the newly developed ERAD substrates showed that a N-linked carbohydrate chain required for ERAD of CPY* is recognized as a ERAD signal only when it was in the misfolded domain.
Analyses using mammalian and yeast cells showed that calnexin/calreticulin, EDEM (Mnllp in yeast) and OS9 function in carbohydrate chain-mediated ER quality control. Arabidopsis has orthologs of these ER quality control machineries. We constructed Arabidopsis knockout mutants of these quality control machineries and found that simultaneous deletion of AtCNX1 and AtCRT1 resulted in growth retardation. We also constructed AtCPY*-GFP, a novel ERAD substrate in plant cells. In contrast to yeast CPY*, we showed that ERAD of AtCPY*GFP does not require its N-linked carbohydrate modification Less

  • Research Products

    (59 results)

All 2008 2007 2006 2005

All Journal Article (14 results) (of which Peer Reviewed: 5 results) Presentation (43 results) Book (2 results)

  • [Journal Article] The plant organelles database(PODB): a collection of visualized plant organelles and protocols for plant organelle research2008

    • Author(s)
      Mano, S
    • Journal Title

      Nucleic Acids Res. 36

      Pages: D929-D937

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] The plant organelles database (PODB) : a collection of visualized plant organelles and protocols for plant organelle research2008

    • Author(s)
      Mano, S
    • Journal Title

      Nucleic Acids Res 36

      Pages: D929-D937

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] 3.8 mitochondria2007

    • Author(s)
      Nishikawa, S
    • Journal Title

      Koubo no subete (eds. Y. Ohsumi and C. Shimoda)

      Pages: 65-76

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Identification of Tam41 maintaining integrity of the TIM23 protein translocator complex in mitochondria.2006

    • Author(s)
      Tamura, Y
    • Journal Title

      J. Cell Biol. 174

      Pages: 631-637

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] 第3章Short Topics 3: GFPを用いた網羅的な可視化マーカーの構築.2006

    • Author(s)
      西川周一
    • Journal Title

      新版植物の細胞を観る実験プロトコール 顕微鏡観察の基本から最新バイオイメージング技術まで (福田裕穂, 西村幹夫, 中野明彦 監修)細胞工学別冊 植物細胞工学シリーズ 22

      Pages: 224-226

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Identification of Tam41 maintaining integrity of the TIM23 protein translocator complex in mitochondria2006

    • Author(s)
      Tamura, Y
    • Journal Title

      J. Cell Biol 174

      Pages: 631-637

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Construction of markers for visualization of plant organelles using GFP-fusion proteins2006

    • Author(s)
      Nishikawa, S
    • Journal Title

      Plant Cell Technol. Series 22

      Pages: 224-226

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Callose(β-1,3glucan)is essential for Arabidopsis pollen wall patterning, but not tube growth.2005

    • Author(s)
      Nishikawa, S
    • Journal Title

      BMC Plant Biol. 5

      Pages: 22

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Roles of molecular chaperones in endoplasmic reticulum(ER)quality control and ER-associated degradation(ERAD).2005

    • Author(s)
      Nishikawa, S
    • Journal Title

      J.Biochem. 137

      Pages: 551-555

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] ミトコンドリアの膜透過装置2005

    • Author(s)
      西川周一
    • Journal Title

      細胞工学 24

      Pages: 786-790

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Callose (β-13 glucan) is essential for Arabidopsis pollen wall patterning, but not tube growth2005

    • Author(s)
      Nishikawa, S
    • Journal Title

      BMC Plant Biol 5

      Pages: 22

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Roles of molecular chaperones in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD)2005

    • Author(s)
      Nishikawa, S
    • Journal Title

      J. Biochem 137

      Pages: 551-555

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Protein translocators in the mitochondrial membranes2005

    • Author(s)
      Nishikawa, S
    • Journal Title

      Cell Technol 24

      Pages: 786-790

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] 11-1 Protein translocators2005

    • Author(s)
      Nishikawa, S
    • Journal Title

      Protein Science : structures, properties and functions (eds. Y. Goto, K. Kuwajima and K. Tanizawa)

      Pages: 485-494

    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] シロイヌナズナの小胞体Hsp70の機能解析2008

    • Author(s)
      丸山大輔
    • Organizer
      第49回日本植物生理学会年会
    • Place of Presentation
      札幌コンベンションセンター(札幌市)
    • Year and Date
      20080320-22
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] シロイヌナズナにおける新規ERAD基質の構築2008

    • Author(s)
      山本雅也
    • Organizer
      第49回日本植物生理学会年会
    • Place of Presentation
      札幌コンベンションセンター(札幌市)
    • Year and Date
      20080320-22
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Analyses of Hsp70 functions in the endoplasmic reticulum of Arabidopsis thaliana2008

    • Author(s)
      Maruyama, D
    • Organizer
      49th Annual Meeting of the Japanese Society of Plant Physiologists
    • Place of Presentation
      Sapporo Convention Center (Sapporo)
    • Year and Date
      20080300
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Construction of a novel ERAD substrate in Arabidopsis thaliana2008

    • Author(s)
      Yamamoto, M
    • Organizer
      49th Annual Meeting of the Japanese Society of Plant Physiologists
    • Place of Presentation
      Sapporo Convention Center (Sapporo)
    • Year and Date
      20080300
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 小胞体品質管理における糖鎖修飾の役割2008

    • Author(s)
      西川周一
    • Organizer
      AISTシンポジウム 酵母の糖鎖生物学とその応用
    • Place of Presentation
      産業技術総合研究所つくばセンター共用講堂(つくば市)
    • Year and Date
      20080214-15
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Roles of carbohydrate modifications on endoplasmic reticulum quality control2008

    • Author(s)
      Nishikawa, S
    • Organizer
      AIST symposium "Yeast Glycobiology and its applications"
    • Place of Presentation
      AIST Auditorium (Tsukuba)
    • Year and Date
      20080200
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] シロイヌナズナの小胞体Hsp70の機能解析2007

    • Author(s)
      丸山大輔
    • Organizer
      BMB2007
    • Place of Presentation
      パシフィコ横浜(横浜市)
    • Year and Date
      20071211-15
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 小胞体関連分解におけるタンパク質の高次構造と糖鎖の役割:改変したERAD基質を利用した解析2007

    • Author(s)
      永井宏征
    • Organizer
      BMB2007
    • Place of Presentation
      パシフィコ横浜(横浜市)
    • Year and Date
      20071211-15
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 植物の生育における小胞体品質管理機構の役割-小胞体Jタンパク質に注目した解析2007

    • Author(s)
      山本雅也
    • Organizer
      BMB2007
    • Place of Presentation
      パシフィコ横浜(横浜市)
    • Year and Date
      20071211-15
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Mnl1p-PDI複合体の酵母小胞体関連分解における役割2007

    • Author(s)
      中戸川万智子
    • Organizer
      BMB2007
    • Place of Presentation
      パシフィコ横浜(横浜市)
    • Year and Date
      20071211-15
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Analyses of Hsp70 functions in the endoplasmic reticulum of Arabidopsis thaliana2007

    • Author(s)
      Maruyama, D
    • Organizer
      BMB2007
    • Place of Presentation
      Pacifico Yokohama (Yokohama)
    • Year and Date
      20071200
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Roles of protein folding and carbohydrate chains on endoplasmic reticulum-associated degradation-analyses using modified substrates2007

    • Author(s)
      Nagai, H
    • Organizer
      BMB2007
    • Place of Presentation
      Pacifico Yokohama (Yokohama)
    • Year and Date
      20071200
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Roles of endoplasmic reticulum (ER) quality control in plant growth-analyses using mutants of ER J proteins2007

    • Author(s)
      Yamamoto, M
    • Organizer
      BMB2007
    • Place of Presentation
      Pacifico Yokohama (Yokohama)
    • Year and Date
      20071200
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Roles of Mnllp-PDI complex on endoplasmic reticulum-associated degradation2007

    • Author(s)
      Nkatogawa, M
    • Organizer
      BMB2007
    • Place of Presentation
      Pacifico Yokohama (Yokohama)
    • Year and Date
      20071200
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Analyses of the Hsp70 System in the Endoplasmic Reticulum of Arabidopsis thaliana2007

    • Author(s)
      Nishikawa, S
    • Organizer
      Satellite Meeting of Kobe University Frontier Technology Forum 2007 "Dynamics of Biological Networks in and around Plant Cells"
    • Place of Presentation
      Kobe University (Kobe)
    • Year and Date
      20071000
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Analyses of J proteins in the endoplasmic reticulum of Arabidopsis thaliana2007

    • Author(s)
      Yamamoto, M
    • Organizer
      71st Annual Meeting of the Japanese Biochemical Society, Chubu Branch
    • Place of Presentation
      Nagoya University (Nagoya)
    • Year and Date
      20070500
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Analyses of subcellular localization and interacting proteins of Mnllp required for endoplasmic reticulum-associated degradation2007

    • Author(s)
      Nakatogawa, M
    • Organizer
      71st Annual Meeting of the Japanese Biochemical Society, Chubu Branch
    • Place of Presentation
      Nagoya University (Nagoya)
    • Year and Date
      20070500
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] シロイヌナズナの小胞体Hsp70変異体がもたらす生殖異常2007

    • Author(s)
      丸山大輔
    • Organizer
      第48回日本植物生理学会年会
    • Place of Presentation
      愛媛大学(松山市)
    • Year and Date
      20070328-30
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] シロイヌナズナの生育における小胞体Jタンパク質の役割の解析2007

    • Author(s)
      山本雅也
    • Organizer
      第48回日本植物生理学会年会
    • Place of Presentation
      愛媛大学(松山市)
    • Year and Date
      20070328-30
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Analyses of fertility defects observed in the Arabidopsis mutants defective in the functions of Hsp70 in the endoplasmic reticulum2007

    • Author(s)
      Maruyama, D
    • Organizer
      48th Annual Meeting of the Japanese Society of Plant Physiologists
    • Place of Presentation
      Ehime University (Matsuyama)
    • Year and Date
      20070300
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Roles of J proteins of ER on Arabidopsis growth and development2007

    • Author(s)
      Yamamoto, M
    • Organizer
      48th Annual Meeting of the Japanese Society of Plant Physiologists
    • Place of Presentation
      Ehime University (Matsuyama)
    • Year and Date
      20070300
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Analyses of the Hsp70 system in the endoplasmic reticulum of Arabidopsis thaliana2007

    • Author(s)
      Nishikawa, S.
    • Organizer
      「神戸大学フロンティア・テクノロジー・フォーラム2007」サテライト研究会"Dynamics of Biological Networks in and around Plant Cells"
    • Place of Presentation
      神戸大学(神戸市)
    • Year and Date
      2007-10-31
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] シロイヌナズナ小胞体Jタンパク質の解析2007

    • Author(s)
      山本雅也
    • Organizer
      第71回日本生化学会中部支部例会
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2007-05-19
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 小胞体関連分解に関与するMnllpの局在と相互作用因子の解析2007

    • Author(s)
      中戸川万智子
    • Organizer
      第71回日本生化学会中部支部例会
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2007-05-19
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 植物細胞小胞体のHsp70システムの解析2006

    • Author(s)
      西川周一
    • Organizer
      分子生物学会2006フォーラム「分子生物学の未来」
    • Place of Presentation
      名古屋国際会議場(名古屋市)
    • Year and Date
      20061206-08
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 小胞体関連分解に関与するMnllpの局在と相互作用因子に関する解析2006

    • Author(s)
      中戸川万智子
    • Organizer
      分子生物学会2006フォーラム「分子生物学の未来」
    • Place of Presentation
      名古屋国際会議場(名古屋市)
    • Year and Date
      20061206-08
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 植物細胞における新規小胞体関連分解基質の開発2006

    • Author(s)
      川鍋光慶
    • Organizer
      分子生物学会2006フォーラム「分子生物学の未来」
    • Place of Presentation
      名古屋国際会議場(名古屋市)
    • Year and Date
      20061206-08
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] シロイヌナズナ小胞体Hsp70欠損変異体の解析2006

    • Author(s)
      丸山大輔
    • Organizer
      分子生物学会2006フォーラム「分子生物学の未来」
    • Place of Presentation
      名古屋国際会議場(名古屋市)
    • Year and Date
      20061206-08
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] シロイヌナズナにおける小胞体Jタンパク質の機能解析2006

    • Author(s)
      山本雅也
    • Organizer
      分子生物学会2006フォーラム「分子生物学の未来」
    • Place of Presentation
      名古屋国際会議場(名古屋市)
    • Year and Date
      20061206-08
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Analyses of the Hsp70 system in the endoplasmic reticulum of plant cells2006

    • Author(s)
      Nishikawa, S
    • Organizer
      MBSJ forum 2006 : Molecular Biology-the Next Decade-Conference & Scientific Exhibition
    • Place of Presentation
      Nagoya Congress Center (Nagoya)
    • Year and Date
      20061200
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Development of novel substrates of endoplasmic reticulum associated protein degradation in plant cells2006

    • Author(s)
      Kawanabe, M
    • Organizer
      MBSJ forum 2006 : Molecular Biology-the Next Decade-Conference & Scientific Exhibition
    • Place of Presentation
      Nagoya Congress Center (Nagoya)
    • Year and Date
      20061200
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Analyses of mutants of Hsp70s in the endoplasmic reticulum of Arabidopsis thaliana2006

    • Author(s)
      Maruyama, D
    • Organizer
      MBSJ forum 2006 : Molecular Biology-the Next Decade-Conference & Scientific Exhibition
    • Place of Presentation
      Nagoya Congress Center (Nagoya)
    • Year and Date
      20061200
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Functional analysis of J proteins in the endoplasmic reticulum of Arabidopsis thaliana2006

    • Author(s)
      Yamamoto, M
    • Organizer
      MBSJ forum 2006 : Molecular Biology-the Next Decade-Conference & Scientific Exhibition
    • Place of Presentation
      Nagoya Congress Center (Nagoya)
    • Year and Date
      20061200
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Characterization of Mnllp which is involved in ER-associated degradation in Saccharomyces cerevisiae2006

    • Author(s)
      Nakatogawa, M
    • Organizer
      MBSJ forum 2006 : Molecular Biology-the Next Decade-Conference & Scientific Exhibition
    • Place of Presentation
      Nagoya Congress Center (Nagoya)
    • Year and Date
      20061200
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Plant organelles database2006

    • Author(s)
      Nishikawa, S.
    • Organizer
      Plant Biology 2006
    • Place of Presentation
      ボストン
    • Year and Date
      20060805-09
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Plant organelles database2006

    • Author(s)
      Nishikawa, S
    • Organizer
      Plant Biology 2006
    • Place of Presentation
      Boston
    • Year and Date
      20060800
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Analyses of the Hsp70 System in the Endoplasmic Reticulum of Arabidopsis thaliana.2006

    • Author(s)
      Nishikawa, S.
    • Organizer
      The 53rd NIBB Conference "Dynamic Organelles in Plants"
    • Place of Presentation
      岡崎コンファレンスセンター(岡崎市)
    • Year and Date
      20060614-17
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Analyses of the Hsp70 System in the Endoplasmic Reticulum of Arabidopsis thaliana2006

    • Author(s)
      Nishikawa, S
    • Organizer
      The 53rd NIBB Conference "Dynamic Organelles in Plants"
    • Place of Presentation
      Okazaki Conference Center (Okazaki)
    • Year and Date
      20060600
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Analyses of the Hsp70 System in the Endoplasmic Reticulum of Arabidopsis thaliana2006

    • Author(s)
      Maruyama, D
    • Organizer
      The 53rd NIBS Conference "Dynamic Organelles in Plants"
    • Place of Presentation
      Okazaki Conference Center (Okazaki)
    • Year and Date
      20060600
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] シロイヌナズナにおけるBipの機能解析2006

    • Author(s)
      丸山大輔
    • Organizer
      第47回日本植物生理学会年会
    • Place of Presentation
      筑波大学(つくば市)
    • Year and Date
      20060319-21
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Analyses of BiP proteins of Arabidopsis thaliana2006

    • Author(s)
      Maruyama, D
    • Organizer
      47th Annual Meeting of the Japanese Society of Plant Physiologists
    • Place of Presentation
      Tsukuba University (Tsukuba)
    • Year and Date
      20060300
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] シロイヌナズナにおける小胞体Jドメインタンパク質の解析2005

    • Author(s)
      山本雅也
    • Organizer
      第28回日本分子生物学会年会
    • Place of Presentation
      ヤフードーム(福岡市)
    • Year and Date
      20051207-10
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Analyses of J-domain containing proteins in the endoplasmic reticulum of Arabidopsis thaliana2005

    • Author(s)
      Yamamoto, M
    • Organizer
      28th Annual Meeting of the Molecular Biology Society of Japan
    • Place of Presentation
      Yahoo Dome (Fukuoka)
    • Year and Date
      20051200
    • Description
      「研究成果報告書概要(欧文)」より
  • [Book] 酵母のすべて・系統, 細胞から分子まで(大隅良典, 下田親 編)2007

    • Author(s)
      西川周一
    • Total Pages
      65-76
    • Publisher
      3.8 ミトコンドリア
    • Description
      「研究成果報告書概要(和文)」より
  • [Book] タンパク質科学:構造, 物性, 機能(後藤祐児, 桑島邦博, 谷澤克行編)2005

    • Author(s)
      西川周一
    • Total Pages
      485-494
    • Publisher
      第11章(1)タンパク質の膜透過装置
    • Description
      「研究成果報告書概要(和文)」より

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Published: 2010-02-04  

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