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2006 Fiscal Year Final Research Report Summary

Phylogeography of eastern Asian plants associated with vicariance in the northwestern Yunnan Province, China.

Research Project

Project/Area Number 17405015
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Biodiversity/Systematics
Research InstitutionKyoto University

Principal Investigator

SETOGUCHI Hiroaki  Kyoto University, Graduate School of Human and Environmental Studies, Department of Interdisciplinary Environment, Associate Professor, 大学院人間・環境学研究科, 助教授 (70206647)

Co-Investigator(Kenkyū-buntansha) YUKAWA Tomohisa  National Science Museum, Tsukuba Botanical Garden, Chief Researcher, 筑波実験植物園, 主任研究員 (50280524)
MOMOHARA Arata  Chiba University, Faculty of Horticulture, Associate Professor, 園芸学部, 助教授 (00250150)
ITO Motomi  The University of Tokyo, Graduate School of Arts and Sciences, Professor, 大学院総合文化研究科, 教授 (00193524)
Project Period (FY) 2005 – 2006
KeywordsPhylogeography / Sino-Japanese region / Yunnan Province / Himalayas / Houttuynia / Ainsliaea
Research Abstract

The flora of the Sino-Japanese plant region of Eastern Asia is distinctively rich compared with other floristic regions in the world ; however, knowledge of its floristic evolution is fairly limited. Our aim was to provide insight into floristic evolution in eastern Asia on the basis of a molecular phylogeny and genomic differentiation (chromosome information) of several taxa. Phylogenetic analyses' of three DNA regions confirmed that Ainsliaea (Compositae) is composed of three major clades that correspond to species distributions. Evolution of the three lineages was estimated to have occurred around 1.1 MYA in the early Pleistocene of the Quaternary. Our results suggest that Ainsliaea species evolved allopatrically and that the descendants were isolated in the eastern (between SE China and Japan, through Taiwan and the Ryukyu Islands) and western (Yunnan Province and its surrounding areas, including the Himalayas, the temperate region of Southeast Asia, and Sichuan Province) sides of the Sino-Japanese region. From the phylogeny of Ainsliaea species, two environmentally heterogeneous regions within the Sino-Japanese region have independently maintained rich and original floras due to their diverse climates and topographies. Moreover, intraspecific polyploidy and cytogeography were examined for samples of Houttuynia cordata from eastern Asia, ranging from Nepal to Japan through China, northern Thailand, and Taiwan. Five chromosome numbers (2n=72, 80, 96, 112, and 128) were detected, four of which were first recorded here. These chromosome numbers suggest that the basic chromosome number of Houttuynia is x=8. The observed cytotypes were evaluated as 2n=72, 80, 96, 112, and 128, and represent 9x, 10x, 12x, 14x, and 16x, respectively. The continental part of east Asia harbors intraspecific polyploidy ranging from 9x to 16x, and only one cytotype, 12x (2n=96), was found from the eastern edge of the Asian continent, between Taiwan and Japan.

  • Research Products

    (40 results)

All 2007 2006 2005 Other

All Journal Article (37 results) Book (3 results)

  • [Journal Article] AFLP analysis of stenophylly for leaf productivity : comparison of the anatomy and physiology of a rheophyte, Farfugium japonicum var. luchuence, and a related non-rheophyte, F. japonicum (Asteraceae).2007

    • Author(s)
      Nomura, N., Setoguchi, H., Yasuda, K., Takaso, T.
    • Journal Title

      Canadian Journal of Botany (In press)

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Genetic structure of populations of the vulnerable aquatic macrophyte Ranunculus nipponicus (Ranunculaceae).2007

    • Author(s)
      Koga, K., Kadono, Y., Setoguchi, H.
    • Journal Title

      Journal of Plant Research 120

      Pages: 167-174

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Phylogeography and refugia of the Japanese endemic alpine plant Phyllodoce nipponica Makino (Ericaceae).2007

    • Author(s)
      Ikeda, H., Setoguchi, H.
    • Journal Title

      Journal of Biogeography 34

      Pages: 169-176

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] The occurrence and identification of Setaria italica (L.) P.Beauv. (foxtail millet) grains from the Chengtoushan site (ca.5800 cal B.P.) in central China, with reference to the domestication centre in Asia.2007

    • Author(s)
      Nasu, H., Momohara, A., Yasuda, Y., He JJ.
    • Journal Title

      Vegetation History and Archaeobotany (In press)

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Phylogeny and comparative seed morphology of epiphytic and terrestrial species of Liparis(Orchidaceae) in Japan.2007

    • Author(s)
      Tsutsumi C, Yukawa T, Lee NS, Lee CS, Kato M
    • Journal Title

      Journal of Plant Research (In press)

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Distribution changes of plants following global climatic Oscillations and subsequent genetic structure.2007

    • Author(s)
      Ikeda, H., Setoguchi, H.
    • Journal Title

      Evolution of Plants.

      Pages: 153-160

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] 高山ガシ類化石を含む中国雲南省西部の新生代植物化石群2006

    • Author(s)
      百原 新, 周 浙昆, 李 暁賢, 瀬戸口浩彰
    • Journal Title

      植生史研究 14

      Pages: 43-44

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Phylogeography of Arcterica nana (Maxim.) Makino (Ericaceae) suggests another range expansion history of Japanese alpine plants.2006

    • Author(s)
      Ikeda H., Setoguchi H.
    • Journal Title

      Journal of Plant research 119

      Pages: 489-495

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Comparison of leaf and floral morphology among insular endemics of Pieris (Ericaceae) on the Ryukyu Islands and Taiwan.2006

    • Author(s)
      Setoguchi, H., Fujita, T., Kurata, K., Maeda, Y., Peng, C.-I.
    • Journal Title

      Acta Phytotaxonomica et Geobotanica 57

      Pages: 173-182

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Phylogeography of Potentilla matsumurae and its intraspecific serpentine-endemic variants.2006

    • Author(s)
      Ikeda H., Senni, K., Fujii, N., Setoguchi, H.
    • Journal Title

      Molecular Ecology 15

      Pages: 3731-3740

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Functional consequences of stenophylly for leaf productivity : comparison of the anatomy and physiology of a rheophyte, Farfugium japonicum var. luchuence, and a related non-rheophyte, F. japonicum (Asteraceae)2006

    • Author(s)
      Nomura, N., Setoguchi, H., Takaso, T.
    • Journal Title

      Journal of Plant Research 119

      Pages: 401-406

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Phylogeography of the genus Cardiandra based on genetic variation in cpDNA sequences.2006

    • Author(s)
      Setoguchi, H., Yukawa, T., Tokuoka, T, Momohara, A., Sogo, A., Takaso, T., Peng, C.I.
    • Journal Title

      Journal of Plant Research 119

      Pages: 401-406

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Genetic diversity of an endangered aquatic plant, Potamogeton lucens subspecies sinicus2006

    • Author(s)
      Uehara, K., Tanaka, N., Momohara, A., Zhou, ZK.
    • Journal Title

      Aquatic Botany 85

      Pages: 350-354

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Sex allocation bias in hermaphroditic plants : effects of local competition and seed dormancy.2006

    • Author(s)
      Tsuchimatsu, T., Sakai, S., Ito, M.
    • Journal Title

      Evolution and Ecological Research 8

      Pages: 829-842

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Isolation of myosin XI genes from the Closterium peracerosum-strigosum-littorale complex and analysis of their expression during sexual reproduction.2006

    • Author(s)
      Hamada, S., Sekimoto, H., Tanabe, Y., Tsuchikane, Y., Ito, M.
    • Journal Title

      Journal of Plant Research 119

      Pages: 105-113

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] The Molecular Evolution of AP2 subfamily.2006

    • Author(s)
      Shigyo, M., Hasebe, M, Ito, M.
    • Journal Title

      Gene 366

      Pages: 256-265

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] The Molecular Evolution of AP2 subfamily.2006

    • Author(s)
      Shigyo, M., Hasebe, M., Ito, M.
    • Journal Title

      Gene 366

      Pages: 256-265

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Phylogeography of Potentilla matsumurae and its intraspecific serpentine-endemic variants.2006

    • Author(s)
      Ikeda, H.Senni, K., Fujii, N., Setoguchi, H.
    • Journal Title

      Molecular Ecology 15

      Pages: 3731-3740

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Functional consequences of stenophylly for leaf productivity : comparison of the anatomy and physiology of a rheophyte, Farfugium japonicum var. luchuence, and a related non-rheophyte, F. japonicum (Asteraceae).2006

    • Author(s)
      Nomura, N., Setoguchi, H., Takaso, T.
    • Journal Title

      Journal of Plant Research 119

      Pages: 645-656

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Phylogeography of the genus Cardiandra based on genetic variation in cpDNA sequences.2006

    • Author(s)
      Setoguchi, H., Yukawa, T., Tokuoka, T., Momohara, A., Sogo, A., Takaso, T., Peng, C.I.
    • Journal Title

      Journal of Plant Research 119

      Pages: 401-406

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Genetic diversity of an endangered aquatic plant, Potamogeton lucens subspecies sinicus.2006

    • Author(s)
      Uehara, K., Tanaka, N., Momohara, A., Zhou, ZK.
    • Journal Title

      Aquatic Botany 85

      Pages: 350-354

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Sex allocation bias in hermaphroditic plants : effects of local Compensation and seed dormancy.2006

    • Author(s)
      Tsuchimatsu, T., Sakai, S., Ito, M.
    • Journal Title

      Evolution and Ecological Research 8

      Pages: 829-842

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] 2006. Molecular phylogenetics of subtribe Aeridinae (Orchidaceae) : insights from plastid matK and nuclear ribosomal ITS sequences.2006

    • Author(s)
      Topik H., Yukawa T., Ito M.
    • Journal Title

      Journal of Plant Research 118

      Pages: 271-284

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Molecular phylogenetics of Phalaenopsis (Orchidaceae) and allied genera : Re-evaluation of generic concepts.2005

    • Author(s)
      Yukawa, T., K.Kita, T.Handa, T.Hidayat, M.Ito.
    • Journal Title

      Acta Phytotaxonomica et Geobotanica 56

      Pages: 141-162

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Phylogenetic analysis of Petunia sensu Jussieu (Solanaceae) using chloroplast DNA RFLP.2005

    • Author(s)
      Ando T., Kokubun H., Watanabe H., Tanaka N., Yukawa T., Hashimoto G., Marchesi E., Suarez E., Basualdo IL.
    • Journal Title

      Annals of Botany 96

      Pages: 289-297

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Molecular phylogenetics of subtribe Aeridinae (Orchidaceae) : insights from plastid matK and nuclear ribosomal ITS sequences.2005

    • Author(s)
      Topik Hidayat, Yukawa, T., Ito, M.
    • Journal Title

      Journal of Plant Research 118

      Pages: 271-284

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Nuclear DNA, chloroplast DNA, and ploidy analysis clarified biological complexity of the Vandenboschia radicans complex (Hymenophyllaceae) in Japan and adjacent areas.2005

    • Author(s)
      Ebihara, A., Ishikawa, H., Matsumoto, S., Lin, S.-J., Iwatsuki, K., Takamiya, M., Watano, Y., Ito, M.
    • Journal Title

      American Journal of Botany 92

      Pages: 1520-1534

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Cytogeography of the Aster ageratoides complex in Korea.2005

    • Author(s)
      Soejima, A., J.-H.Pak, T.Morita, M.Ito
    • Journal Title

      Acta Phytotaxonomica et Geobotanica 56

      Pages: 97-104

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Characterization of MADS-box genes in charophycean green algae and its implication for the evolution of MADS-box genes.2005

    • Author(s)
      Tanabe, Y., Hasebe, M., Sekimoto, H., Nishiyama, T., Kitani, M., Henschel, T., Muenster, T., Theissen, G., Nozaki, H., Ito, M.
    • Journal Title

      Proceedings of the National Academy of Sciences, U.S.A. 102

      Pages: 2436-2441

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] KNOX homeobox genes potentially have similar function in both diploid unicellular and multicellular meristems, but not in haploid meristems.2005

    • Author(s)
      Sano, R., Jua'rez, c, C.M., Hass, B., Sakakibara, K., Ito, M., Banks, A.J., Hasebe, M.
    • Journal Title

      Evolutionary Development 7

      Pages: 69-78

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Ito Cytogeography of the Aster ageratoides complex in Korea.2005

    • Author(s)
      Soejima, A., J.-H.Pak, T.Morita, M.
    • Journal Title

      Acta Phytotaxonomica et Geobotanica 56

      Pages: 97-104

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Characterization of MADS-box genes in charophycean green algae and its implication for the evolution of MADS-box genes.2005

    • Author(s)
      Tanabe, Y., Hasebe, M., Sekimoto, H., Nishiyama, T., Kitani, M., Henschel, T., Muenster, T., Theissen, G., Nozaki, H., Ito, M.
    • Journal Title

      Proc. Natl. Acad. Sci USA 102

      Pages: 2436-2441

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] KNOX homeobox genes potentiallyhave similar function in both diploid unicellular and multicellular meristems, but not in haploid meristems.2005

    • Author(s)
      Sano, R., Jua'rez, c, C.M., Hass, B., Sakakibara, K., Ito, M., Banks, A.J., Hasebe, M.
    • Journal Title

      Evol. Dev. 7

      Pages: 69-78

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] AFLP analysis of stenophylly for leaf productivity : comparison of the anatomy and physiology of a rheophyte, Farfugium japonicum var. luchuence, and a related non-rheophyte, F japonicum. (Asteraceae).

    • Author(s)
      Nomura, N., Setoguchi, H., Yasuda, K., Takaso, T.
    • Journal Title

      Canadian Journal of Botany (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] The occurrence and identification of Setaria italica (L.) P.Beauv. (foxtail millet) grains from the Chengtoushan site (ca.5800 cal B.P.) in central China, with reference to the domestication centre in Asia.

    • Author(s)
      Nasu, H., Momohara, A., Yasuda, Y., He JJ.
    • Journal Title

      Vegetation History and Archaeobotany (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Phylogeny and comparative seed morphology of epiphytic and terrestrial species of Liparis (Orchidaceae) in Japan.

    • Author(s)
      Tsutsumi C, Yukawa T, Lee NS, Lee CS, Kato M.
    • Journal Title

      Journal of Plant Research (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Cenozoic flora with Quercus sect. Heterobalanus in the Western Yunnan Province, southwestern China.

    • Author(s)
      Momohara, A., Zhou, Z.-K., Li, S.-T., Setoguchi, H.
    • Journal Title

      Japanese Journal of Historical Botany 14

      Pages: 43-44

    • Description
      「研究成果報告書概要(欧文)」より
  • [Book] 細胞工学別冊 植物の進化2007

    • Author(s)
      池田啓, 瀬戸口浩彰(分担執筆)
    • Total Pages
      212
    • Publisher
      秀潤社,東京
    • Description
      「研究成果報告書概要(和文)」より
  • [Book] 地球史のいまと近未来-地球環境の可能性を読む2007

    • Author(s)
      百原 新(分担執筆)
    • Total Pages
      480
    • Publisher
      東京大学出版会,東京
    • Description
      「研究成果報告書概要(和文)」より
  • [Book] 千葉県館山市沖ノ島遺跡 第2. 3次発掘調査慨報2006

    • Author(s)
      百原 新(分担執筆)
    • Total Pages
      456
    • Publisher
      千葉大学文学部考古学研究室,千葉市
    • Description
      「研究成果報告書概要(和文)」より

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Published: 2008-05-27  

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