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2009 Fiscal Year Final Research Report

Estimations of neural networks by fluctuations of neuron spikes

Research Project

  • PDF
Project/Area Number 18079003
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Science and Engineering
Research InstitutionThe University of Tokyo

Principal Investigator

OKADA Masato  The University of Tokyo, 大学院・新領域創成科学研究科, 教授 (90233345)

Co-Investigator(Kenkyū-buntansha) MIMURA Kazushi   (40353297)
Project Period (FY) 2006 – 2009
Keywords多体問題 / 統計力学 / 神経科学 / BMI / データマイニング
Research Abstract

It has become possible to make simultaneous measurements of neural activity (spikes) in large numbers of neurons with large arrays of electrodes. Significant advantage of the statistical mechanical informatics (SMI) is to extract a macroscopic description of the system with a small number of parameters by performing reduction of many microscopic degrees of freedom. Hierarchy, reduction, and macroscopic description should also be essential in order to understand the brain. From this point of view, we proposed new SMI frameworks for neural network models, and methods for analyzing neuronal spike data based on the information theory and the Bayesian inference.

  • Research Products

    (62 results)

All 2010 2009 2008 2007 2006 Other

All Journal Article (59 results) (of which Peer Reviewed: 59 results) Book (2 results) Remarks (1 results)

  • [Journal Article] Mismatched decoding in the brain2010

    • Author(s)
      Masafumi Oizumi, Toshiyuki Ishi, Kazuya Ishibashi, Toshihiko Hosoya, Masato Okada
    • Journal Title

      Journal of Neuroscience 30(13)

      Pages: 4815-4826

    • Peer Reviewed
  • [Journal Article] Is the Langevin phase equation an efficient model for oscillating neurons?2009

    • Author(s)
      Keisuke Ota, Takamasa Tsunoda, Toshiaki Omori, Shigeo Watanabe, Hiroyoshi Miyakawa, Masato Okada, Toru Aonishi
    • Journal Title

      Journal of Physics: Conference Series 197

      Pages: 012016

    • Peer Reviewed
  • [Journal Article] Statistical mechanics of attractor neural network models with synaptic depression2009

    • Author(s)
      Yasuhiko Igarashi, Masafumi Oizumi, Yosuke Otsubo, Kenji Nagata, Masato Okada
    • Journal Title

      Journal of Physics: Conference Series 197

      Pages: 012018

    • Peer Reviewed
  • [Journal Article] Applying manifold learning to plotting approximate contour trees2009

    • Author(s)
      Shigeo Takahashi, Issei Fujishiro, Masato Okada
    • Journal Title

      IEEE Transactions on Visualization and Computer Graphics 15(6)

    • Peer Reviewed
  • [Journal Article] Neural network model with discrete and continuous information representation2009

    • Author(s)
      Jun Kitazono, Toshiaki Omori, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 78(11)

      Pages: 114801

    • Peer Reviewed
  • [Journal Article] Statistical mechanics of on-line mutual learning with many linear perceptrons2009

    • Author(s)
      Kazuyuki Hara, Yoichi Nakayama, Seiji Miyoshi, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 78(11)

      Pages: 114001

    • Peer Reviewed
  • [Journal Article] Variational Bayesian mixture model on a subspace of exponential family distributions2009

    • Author(s)
      Kazuho Watanabe, Shotaro Akaho, Shinichiro Omachi, Masato Okada
    • Journal Title

      IEEE Transactions on Neural Networks 20(11)

      Pages: 1783-1796

    • Peer Reviewed
  • [Journal Article] Transfer matrix method for instantaneous spike rate estimation2009

    • Author(s)
      Kazuho Watanabe, Hiroyuki Tanaka, Keiji Miura, Masato Okada
    • Journal Title

      IEICE Transactions on Information and Systems E92.D(7)

      Pages: 1392-1368

    • Peer Reviewed
  • [Journal Article] Bayes-optimal solution to inverse halftoning based on statistical mechanics of the Q-Ising model2009

    • Author(s)
      Yohei Saika, Jun-ichi Inoue, Hiroyuki Tanaka, Masato Okada
    • Journal Title

      Central European Journal of Physics 7(3)

      Pages: 444-456

    • Peer Reviewed
  • [Journal Article] Quantum mean-field decoding algorithm for error-correcting codes2009

    • Author(s)
      Jun-ichi Inoue, Yohei Saika, Masato Okada
    • Journal Title

      Journal of Physics: Conference Series 143

      Pages: 012019

    • Peer Reviewed
  • [Journal Article] Exact inference in discontinuous firing rate estimation using Belief propagation2009

    • Author(s)
      Ken Takiyama, Kentaro Katahira, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 78(6)

      Pages: 064003

    • Peer Reviewed
  • [Journal Article] Statistical mechanics of Mexican-hat-type horizontal connection2009

    • Author(s)
      Ken Takiyama, Yasushi Naruse, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 78(6)

      Pages: 064002

    • Peer Reviewed
  • [Journal Article] Effect of slow switching of ensemble teachers in On-line learning2009

    • Author(s)
      Seiji Miyoshi, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 78(5)

      Pages: 053001

    • Peer Reviewed
  • [Journal Article] Steep decrease in the specific membrane resistance in the apical dendrites of hippocampal CA1 pyramidal neurons2009

    • Author(s)
      Toshiaki Omori, Toru Aonishi, Hiroyoshi Miyakawa, Masashi Inoue, Masato Okada
    • Journal Title

      Neuroscience Research 64(1)

      Pages: 83-95

    • Peer Reviewed
  • [Journal Article] Effect of asymmetry in a binary state on the collective behavior of a system with spatially modulated interaction and quenched randomness2008

    • Author(s)
      Kosuke Hamaguchi, Hiromitsu Urano, Masato Okada
    • Journal Title

      Physical Review E 78

      Pages: 051124

    • Peer Reviewed
  • [Journal Article] Population coding of song element sequence in the Bengalese finch HVC2008

    • Author(s)
      Jun Nishikawa, Masato Okada, Kazuo Okanoya
    • Journal Title

      European Journal of Neuroscience 27(12)

      Pages: 3273-3283

    • Peer Reviewed
  • [Journal Article] Statistical mechanics of lossy compression for nonmonotonic multilayer perceptrons2008

    • Author(s)
      Florent Cousseau, Kazushi Mimura, Toshiaki Omori, Masato Okada
    • Journal Title

      Physical Review E 78

      Pages: 021124

    • Peer Reviewed
  • [Journal Article] Multiple stability of a sparsely encoded attractor neural network model for the inferior temporal cortex2008

    • Author(s)
      Tomoyuki Kimoto, Tatsuya Uezu, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 77(12)

      Pages: 124002

    • Peer Reviewed
  • [Journal Article] Rate reduction for associative memory model in Hodgkin-Huxley-type network2008

    • Author(s)
      Masafumi Oizumi, Yoichi Miyawaki, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 77(6)

      Pages: 064802

    • Peer Reviewed
  • [Journal Article] Bayesian-optimal image reconstruction for translational- symmetric filters2008

    • Author(s)
      Satohiro Tajima, Masato Inoue, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 77(5)

      Pages: 054803

    • Peer Reviewed
  • [Journal Article] Image restoration with a truncated Gaussian model2008

    • Author(s)
      Hiroyuki Tanaka, Keiji Miura, Masato Okada
    • Journal Title

      Journal of the Physical Society Japan 77(3)

      Pages: 034003

    • Peer Reviewed
  • [Journal Article] Deterministic annealing variant of variational Bayes method2008

    • Author(s)
      Kentaro Katahira, Kazuho Watanabe, Masato Okada
    • Journal Title

      Journal of Physics: Conference Series 95

      Pages: 012015

    • Peer Reviewed
  • [Journal Article] Statistical mechanics of mutual learning with a latent teacher2007

    • Author(s)
      Kazuyuki Hara, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 76(1)

      Pages: 014001

    • Peer Reviewed
  • [Journal Article] Balanced excitatory and inhibitory inputs to cortical neurons decouple firing irregularity from rate modulations2007

    • Author(s)
      Keiji Miura, Yasuhiro Tsubo, Masato Okada, Tomoki Fukai
    • Journal Title

      Journal of Neuroscience 27

      Pages: 13802-13812

    • Peer Reviewed
  • [Journal Article] A neural network model for generating complex birdsong syntax2007

    • Author(s)
      Kentaro Katahira, Kazuo Okanoya, Masato Okada
    • Journal Title

      Biological Cybernetics 97

      Pages: 441-448

    • Peer Reviewed
  • [Journal Article] Theory of time domain ensemble on-line learning of perceptron2007

    • Author(s)
      Tatsuya Uezu, Seiji Miyoshi, Mika Izuo, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 76

      Pages: 114006

    • Peer Reviewed
  • [Journal Article] Statistical mechanics of nonlinear on-line learning for ensemble teachers2007

    • Author(s)
      Hideto Utsumi, Seiji Miyoshi, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan, 76 76

      Pages: 114001

    • Peer Reviewed
  • [Journal Article] Retrieval property of attractor network with synaptic depression2007

    • Author(s)
      Narihisa Matsumoto, Daisuke Ide, Masataka Watanabe, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 76

      Pages: 084005

    • Peer Reviewed
  • [Journal Article] Variable time scales of repeated spike patterns in synfire chain with mexican-hat connectivity2007

    • Author(s)
      Kosuke Hamaguchi, Masato Okada, Kazuyuki Aihara
    • Journal Title

      Neural Computation 19

      Pages: 2468-2491

    • Peer Reviewed
  • [Journal Article] Filtering of spatial bias and noise inputs by locally connected neural networks2007

    • Author(s)
      Naoki Masuda, Masato Okada, Kazuyuki Aihara
    • Journal Title

      Neural Computation 19

      Pages: 1854-1870

    • Peer Reviewed
  • [Journal Article] Study on quantum annealing using the density matrix renormalization group2007

    • Author(s)
      Sei Suzuki, Masato Okada
    • Journal Title

      Interdisciplinary Information Sciences 13

      Pages: 49

    • Peer Reviewed
  • [Journal Article] LDPC decoding dynamics from a PCA viewpoint2007

    • Author(s)
      Shinpei Hara, Yuta Akira, Eisuke Ishii, Masato Inoue, Masato Okada
    • Journal Title

      Interdisciplinary Information Sciences 13

      Pages: 43

    • Peer Reviewed
  • [Journal Article] Selectivity and stability via dendritic nonlinearity2007

    • Author(s)
      Kenji Morita, Masato Okada, Kazuyuki Aihara
    • Journal Title

      Neural Computation 19

      Pages: 1798

    • Peer Reviewed
  • [Journal Article] Statistical mechanical study of CDMA multiuser detectors-Analysis of RS and 1RSB solutions-2007

    • Author(s)
      Mika Yoshida, Tatsuya Uezu, Toshiyuki Tanaka, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 76(5)

      Pages: 054003

    • Peer Reviewed
  • [Journal Article] Statistical mechanics of on-line learning when a moving teacher goes around an unlearnable true teacher2007

    • Author(s)
      Masahiro Urakami, Seiji Miyoshi, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 76(4)

      Pages: 044003

    • Peer Reviewed
  • [Journal Article] Higher order effects on rate reduction for networks of Hodgkin-Huxley neurons2007

    • Author(s)
      Masafumi Oizumi, Yoichi Miyawaki, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 76(4)

      Pages: 044803

    • Peer Reviewed
  • [Journal Article] Retrieval of branching sequences in an associative memory model with common external input and bias input2007

    • Author(s)
      Kentaro Katahira, Masaki Kawamura, Kazuo Okanoya, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 76(4)

      Pages: 044804

    • Peer Reviewed
  • [Journal Article] Controlling synfire chain by inhibitory synaptic input2007

    • Author(s)
      Takashi Shinozaki, Hideyuki Cateau, Hidetoshi Urakubo, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 76(4)

      Pages: 044806

    • Peer Reviewed
  • [Journal Article] information science and associative memory model2006

    • Author(s)
      Masato Okada, Brain science
    • Journal Title

      New Generation Compu- ting 24

      Pages: 185-201

    • Peer Reviewed
  • [Journal Article] Analytic solution of neural network with diso- rdered lateral inhibition2006

    • Author(s)
      Kosuke Hamaguchi, Jonathan PL Hatchett, Masato Okada
    • Journal Title

      Physical Review E, 73, 051104 73

      Pages: 051104

    • Peer Reviewed
  • [Journal Article] Unbiased estimator of shape parameter for spiking irregularities under changing environments2006

    • Author(s)
      Keiji Miura, Masato Okada,, Shun-ichi Amari
    • Journal Title

      Advances in Neural Information Processing Systems 18

      Pages: 891

    • Peer Reviewed
  • [Journal Article] Estimated distribution of specific membrane resistance in hippocampal CA1 pyramidal neuron2006

    • Author(s)
      Toshiaki Omori, Toru Aonishi, Hiroyoshi Miyakawa, Masashi Inoue, Masato Okada
    • Journal Title

      Brain Research 1125

      Pages: 199

    • Peer Reviewed
  • [Journal Article] Estimating spiking irregularities under changing environments2006

    • Author(s)
      Keiji Miura, Masato Okada,, Shun-ichi Amari
    • Journal Title

      Neural Computation 18

      Pages: 2359

    • Peer Reviewed
  • [Journal Article] Statistical mechanics of lossy compression using multilayer perceptrons2006

    • Author(s)
      Kazushi Mimura, Masato Okada
    • Journal Title

      Physical Review E 74

      Pages: 026108

    • Peer Reviewed
  • [Journal Article] Stochastic transitions of attractors in associative memory models with correlated noise2006

    • Author(s)
      Masaki Kawamura, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 75(12)

      Pages: 124063

    • Peer Reviewed
  • [Journal Article] Statistical mechanics of linear and nonlinear time-domain ensemble learning2006

    • Author(s)
      Seiji Miyoshi, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 75(12)

      Pages: 124002

    • Peer Reviewed
  • [Journal Article] Theory of interaction of memory patterns in layered associative network2006

    • Author(s)
      Kazuya Ishibashi, Kosuke Hamaguchi, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 75(11)

      Pages: 114803

    • Peer Reviewed
  • [Journal Article] Distinction of coexistent attractors in an attractor neural network model using a relaxation process of fluct- uations in firing rates - Analysis with statistical mechanics2006

    • Author(s)
      Sawako Tanimoto, Masato Okada, Tomoyuki Kimoto, Tatsuya Uezu
    • Journal Title

      Journal of the Physical Society of Japan 75(10)

      Pages: 104004

    • Peer Reviewed
  • [Journal Article] Statistical mechanics of time domain ensemble learning2006

    • Author(s)
      Seiji Miyoshi, Tatsuya Uezu, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 75(8)

      Pages: 084007

    • Peer Reviewed
  • [Journal Article] Statistical mechanics of online learning for ensemble teachers2006

    • Author(s)
      Seiji Miyoshi, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 75(4)

      Pages: 044002

    • Peer Reviewed
  • [Journal Article] Analysis method combining Monte Carlo simulation and principal component analysis - Application to Sourlas code2006

    • Author(s)
      Masato Inoue, Koji Hukushima, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 75(8)

      Pages: 084003

    • Peer Reviewed
  • [Journal Article] Analysis of on-line learning when a moving teacher goes around a true teacher2006

    • Author(s)
      Seiji Miyoshi, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 75(2)

      Pages: 024003

    • Peer Reviewed
  • [Journal Article] Dynamical replica theoretic analysis of CDMA detection dynamics2006

    • Author(s)
      Jonathan PL Hatchett, Masato Okada
    • Journal Title

      Journal of Physics A:Mathematical and General 39(15)

      Pages: 3883-3902

    • Peer Reviewed
  • [Journal Article] Globally coupled resonate-and-fire models2006

    • Author(s)
      Keiji Miura, Masato Okada
    • Journal Title

      Progress of Theoretical Physics Supplement 161

      Pages: 255-259

    • Peer Reviewed
  • [Journal Article] Instabilities in associative memory model with synaptic depresssion and switching phenomena among attractors

    • Author(s)
      Yosuke Otsubo, Kenji Nagata, Masafumi Oizumi, Masato Okada
    • Journal Title

      to be published in Journal of the Physical Society of Japan

    • Peer Reviewed
  • [Journal Article] Mean field analysis of stochastic neural network models with synaptic depression

    • Author(s)
      Yasuhiko Igarashi, Masafumi Oizumi, Masato Okada
    • Journal Title

      to be published in Journal of the Physical Society of Japan

    • Peer Reviewed
  • [Journal Article] Mechanisms of maximum information preservation in the Drosophila antennal lobe, to be published in PLoS ONE

    • Author(s)
      Ryota Satoh#, Masafumi Oizumi#, Hokto Kazama, Masato Okada
    • Journal Title

      These authors equally contributed to this work

    • Peer Reviewed
  • [Journal Article] Analytical investigation of the effects of lateral connections on the accuracy of population coding

    • Author(s)
      Masafumi Oizumi, Keiji Miura, Masato Okada
    • Journal Title

      to be published in Physical Review E

    • Peer Reviewed
  • [Journal Article] Sparse and dense encoding in layered associative network of spiking neurons

    • Author(s)
      azuya Ishibashi, Kosuke Hamaguchi, Masato Okada
    • Journal Title

      Journal of the Physical Society of Japan 76

      Pages: 124801

    • Peer Reviewed
  • [Book] スパイクの確率論(『シリーズ脳科学1脳の計算論』,深井朋樹(編),甘利俊一(監修))2009

    • Author(s)
      岡田真人
    • Total Pages
      223-251
    • Publisher
      東京大学出版社
  • [Book] 視覚情報処理入門(『理工学系からの脳科学入門』, 合原一幸(編), 神崎亮平(編))2008

    • Author(s)
      岡田真人
    • Total Pages
      81-98
    • Publisher
      東京大学出版社
  • [Remarks]

    • URL

      http://mns.k.u-tokyo.ac.jp/~okada/

URL: 

Published: 2011-06-18   Modified: 2016-04-21  

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