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2009 Fiscal Year Final Research Report

Studies on roles of translesion DNA synthesis in thresholds for genotoxic substances

Research Project

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Project/Area Number 18201010
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Risk sciences of radiation/Chemicals
Research InstitutionNational Institute of Health Sciences

Principal Investigator

NOUMI Takehiko  National Institute of Health Sciences, 変異遺伝部, 部長 (30150890)

Co-Investigator(Kenkyū-buntansha) MASUMURA Kenichi  国立医薬品食品衛生研究所, 変異遺伝部, 主任研究官 (40291116)
Project Period (FY) 2006 – 2009
Keywordsトキシコロジー / 遺伝毒性の閾値 / 有害化学物質 / 遺伝子 / 環境 / 癌
Research Abstract

DNA polymerase kappa (Polκ) is an enzyme involved in DNA synthesis across DNA lesions (translesion DNA synthesis). We identified important amino acids involved in the translesion DNA synthesis and generated human cells and mice, whose Polκ activities were inactivated by specific amino acids substitutions. The results suggest that translesion DNA synthesis may be one of mechanisms underlying practical thresholds for genotoxicity. An international symposium on genotoxic and carcinogenic thresholds has been organized.

  • Research Products

    (29 results)

All 2010 2009 2008 2007 2006 Other

All Journal Article (14 results) Presentation (12 results) Book (1 results) Remarks (1 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Critical amino acids in human DNA polymerasesηandκinvolved in erroneous incorporation of oxidized nucleotides2010

    • Author(s)
      A. Katafuchi, A. Sassa, N. Niimi, P. Gruz, H. Fujimoto, C. Masutani, F. Hanaoka, T. Ohta, T. Nohmi
    • Journal Title

      Nucleic Acids Res. 38

      Pages: 859-867

  • [Journal Article] The steric gate amino acid tyrosine 112 is required for efficient mismatched-primer extension by human DNA polymeraseκ2009

    • Author(s)
      N. Niimi, A. Sassa, A. Katafuchi, P. Gruz, H. Fujimoto, R.R. Bonala, F. Johnson, T. Ohta, T. Nohmi
    • Journal Title

      Biochem. 48

      Pages: 4239-4246

  • [Journal Article] Spontaneous mutagenesis in rodents: spontaneous gene mutations identified by neutral reporter genes in gpt delta transgenic mice and rats2009

    • Author(s)
      K. Masumura, T. Nohmi
    • Journal Title

      J. Health Sci. 55

      Pages: 40-49

  • [Journal Article] Possible mechanisms of practical thresholds for genotoxicity2008

    • Author(s)
      T. Nohmi
    • Journal Title

      Genes and Environ. 30

      Pages: 108-113

  • [Journal Article] International symposium on genotoxic and carcinogenic thresholds2008

    • Author(s)
      T. Nohmi, N. Toyoda-Hokaiwado, M. Yamada, K. Masumura, M. Honma, S. Fukushima
    • Journal Title

      Genes and Environ. 30

      Pages: 101-107

  • [Journal Article] Specificity of mutations induced by incorporation of oxidized dNTPs into DNA by human DNA polymeraseη2008

    • Author(s)
      K. Hidaka, M. Yamada, H. Kamiya, C. Masutani, H. Harashima, F. Hanaoka, T. Nohmi
    • Journal Title

      DNA Repair 7

      Pages: 497-506

  • [Journal Article] Enhanced spontaneous and benzo(a)pyrene-induced mutations in the lung of Nrf2-deficient gpt delta mice2007

    • Author(s)
      Y. Aoki, A.H. Hashimoto, K. Akanuma, M. Matsumoto, K. Hiyoshi, H. Takano, K. Masumura, K. Itoh, T. Nohmi, M. Yamamoto
    • Journal Title

      Cancer Res. 67

      Pages: 5643-5648

  • [Journal Article] Novel DNA polymerases and novel genotoxicity assays2007

    • Author(s)
      T. Nohmi
    • Journal Title

      Genes and Environ. 29

      Pages: 75-88

  • [Journal Article] Efficient and erroneous incorporation of oxidized DNA precursors by human DNA polymeraseη2007

    • Author(s)
      M. Shimizu, P. Gruz, H. Kamiya, C. Masutani, Y. Xu, Y. Usui, H. Sugiyama, H. Harashima, F. Hanaoka, T. Nohmi
    • Journal Title

      Biochem. 46

      Pages: 5515-5522

  • [Journal Article] Environmental stress and lesion-bypass DNA polymerases2006

    • Author(s)
      T. Nohmi
    • Journal Title

      Ann. Rev. Microbiol. 60

      Pages: 231-253

  • [Journal Article] Involvement of Y-family DNA polymerases in mutagenesis caused by oxidized nucleotides in Escherichia coli2006

    • Author(s)
      M. Yamada, T. Nunoshiba, M. Shimizu, P. Gruz, H. Kamiya, H. Harashima, T. Nohmi
    • Journal Title

      J. Bacteriol. 188

      Pages: 4992-4995

  • [Journal Article] Specificity of replicative and SOS-inducible DNA polymerases in frameshift mutagenesis: Mutability of Salmonella typhimurium strains overexpressing SOS-inducible DNA polymerases to 30 chemical mutagens2006

    • Author(s)
      K. Matsui, M. Yamada, M. Imai, K. Yamamoto, T. Nohmi
    • Journal Title

      DNA Repair 5

      Pages: 465-478

  • [Journal Article] Dynamic Bypass of a Major Cisplatin-DNA Adduct Revealed in Structural, Kinetic and in vivo Studies

    • Author(s)
      J.H.Y. Wong, J.A. Brown, Z. Suo, P. Blum, T. Nohmi, H. Ling
    • Journal Title

      EMBO J. (in press)

  • [Journal Article] DNA polymeraseds involved in the incorporation of oxidized nucleotides into DNA: the efficiency and template base preference

    • Author(s)
      A. Katafuchi, T. Nohmi
    • Journal Title

      Mutat. Res. (in press)

  • [Presentation] Nucleotide pool damage and Y-family DNA polymerases2010

    • Author(s)
      T. Nohmi
    • Organizer
      Gorden Research Conferences, DNA damage, mutation & cancer, Ventura
    • Place of Presentation
      CA, USA
    • Year and Date
      20100321-20100326
  • [Presentation] ヒト細胞におけるDNAポリメラーゼκの機能解析2009

    • Author(s)
      新見直子, 飯泉晋, 足立典隆, 小山秀樹, 能美健彦
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      20091200
  • [Presentation] Establishment of of human cell lines lacking the catalytic activity of DNA polymerase kappa involved in translesion DNA synthesis2009

    • Author(s)
      N. Niimi, P. Gruz, S. Iiizumi, N. Adachi, H. Koyama, T. Nohmi
    • Organizer
      The 40th International Symposium of the Princess Takamatsu Cancer Research Foundation
    • Place of Presentation
      Tokyo
    • Year and Date
      20091110-20091112
  • [Presentation] Erroneous incorporation of oxidized nucleotides by Y-family DNA polymerases2009

    • Author(s)
      A. Katafuchi, A. Sassa, N. Niimi, P. Gruz, H. Fujimoto, C. Masutani, F. Hanaoka, T. Ohta, T. Nohmi
    • Organizer
      10th International Conference on Environmental Mutagens in Firenze
    • Place of Presentation
      Italy
    • Year and Date
      20090820-20090815
  • [Presentation] Possible mechanisms underlying practical thresholds for genotoxic carcinogens2009

    • Author(s)
      T. Nohmi
    • Organizer
      10th International Conference on Environmental Mutagens in Firenze
    • Place of Presentation
      Italy
    • Year and Date
      20090820-20090515
  • [Presentation] Genotoxic versus non-genotoxic mechanisms: feed-back from Genotoxic and Carcinogenic Thresholds in Tokyo2009

    • Author(s)
      T. Nohmi
    • Organizer
      5th International Workshop on genotoxicity testing, Basel
    • Place of Presentation
      Switzerland
    • Year and Date
      20090818-20090819
  • [Presentation] Control of multiple DNA polymerases dealing with lesions induced by environmental mutagens2009

    • Author(s)
      T. Nohmi, K. Kokubo, M. Yamada, P. Gruz
    • Organizer
      36th Annual Meeting of the European Environmental Mutagen Society in Prague
    • Place of Presentation
      Czech
    • Year and Date
      20090700
  • [Presentation] A crucial role for the steric gate amino acid tyrosine 112 in efficient mismatched-primer extension by human DNA polymeraseκ2009

    • Author(s)
      N. Niimi, A. Sassa, A. Katafuchi, P. Gruz, H. Fujimoto, R. -R. Bonala, F. Johnson, T. Ohta, T. Nohmi
    • Organizer
      ASM Conferences, DNA Repair and Mutagenesis in Whistler
    • Place of Presentation
      BC, Canada
    • Year and Date
      20090530-20090605
  • [Presentation] Possible Mechanisms of Practical Genotoxic Thresholds2008

    • Author(s)
      T. Nohmi
    • Organizer
      International Symposium on Genotoxic and Carcinogenic Thresholds
    • Place of Presentation
      Tokyo
    • Year and Date
      20080700
  • [Presentation] The role of Y-family DNA polymerase in oxidative mutagenesis2007

    • Author(s)
      T. Nohmi
    • Organizer
      38th Annual Meeting of Environmental Mutagen Society in Atlanta
    • Place of Presentation
      USA
    • Year and Date
      20071000
  • [Presentation] DNA repair as a constituent of thresholds of genotoxicity2007

    • Author(s)
      T. Nohmi
    • Organizer
      37th European Environmental Mutagen Society
    • Place of Presentation
      Basel, Switzerland
    • Year and Date
      20070900
  • [Presentation] Roles of Y-family DNA polymerases in mutagenesis via the misincorporation of oxidized dNTPs2007

    • Author(s)
      T. Nohmi
    • Organizer
      The 3rd Japan US DNA repair meeting in Sendai
    • Place of Presentation
      Japan
    • Year and Date
      20070500
  • [Book] DNA repair and DNA damage tolerance in archaeal bacteria: extreme environments and genome integrity, in Archaea: new models for prokaryotic biology2008

    • Author(s)
      T. Nohmi, M. Yamada, P. Gruz
    • Total Pages
      147-169
    • Publisher
      Horizon Scientific Press.
  • [Remarks] ホームページ等

    • URL

      http://dgm2alpha.nihs.go.jp/

  • [Patent(Industrial Property Rights)] 突然変異検出用トランスジェニックラットとその作製方法およびそれを用いた突然変異試験法2006

    • Inventor(s)
      能美健彦、増村健一、神藤康弘、林宏行
    • Industrial Property Rights Holder
      国立医薬品食品衛生研究所長
    • Industrial Property Number
      特許権・特許第3799445号
    • Filing Date
      2006-05-12
    • Acquisition Date
      2006-05-12

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Published: 2011-06-18   Modified: 2016-04-21  

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