• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to project page

2007 Fiscal Year Final Research Report Summary

Development ofenzyme inlulkar far infectious diseace including malaria and clarification ofthe inlubitor activity

Research Project

Project/Area Number 18350086
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Chemistry related to living body
Research InstitutionOsaka University

Principal Investigator

INOUE Tsuyoshi  Osaka University, Graduate School of Engineering, Division ofApplied Chemistry, Associate Professor (20263204)

Co-Investigator(Kenkyū-buntansha) KAI Yasushi  Fukui University, of Technology, Department of Environmental and Biotechnological Frontier Engineering, Professor (40029236)
MATSUMURA Hiroyoshi  Osaka University, Graduate School of Engineering, Division ofApplied Chemistry, Assistant Professor (30324809)
Project Period (FY) 2006 – 2007
KeywordsPlasmodium falciparum / infectious desease / drug design / X-ray structure analysis
Research Abstract

Tropical diseases such as human malaria, leishmaniasis, Chagas disease, human African trypanosomiasis, dengue fever and schistosomiasis continue to cause significant morbidity and mortality. In this project, we performed X-ray crystallographic studies of important enzymes from parasite concerning three these infectious disease to construct the structural basis for the drug development by the in-silica method. The important enzymes are (1) two kinds of enzymes concerning the de novo synthesis of pyrimidine nucleotide from human malaria, (2) prostaglandin (PG) F synthases from parasites of Chagas' disease and Leishmania.
Recombinant enzymes of orotate phosphoribosyltransferase (pyr5) and Orotidine 5'-monophosphate decarboxylase (pyr6) were purified from E.coli and crystallized. As the result, the native and product UMP complex form of pyr6 were crystallized and carried out with the X-ray structural analyses. The 2.7 and 2.6 A resolutional structures of apo- and complex forms of pyr6 provided the details of the decarboxylation mechanism (J. Biochem., 2008). As for the PGF synthases from Trypanosoma cruzi and Leishmania mejor were also performed crystallization and the structure of PGF synthase from T. cruzi were determined at 1.7 A resolution (Acta Cryst. F, 2007). The complex structure of PGF sytnthase with indomethacin were also determined, providing the structural information for new inhibitor development.

  • Research Products

    (26 results)

All 2008 2007

All Journal Article (12 results) (of which Peer Reviewed: 6 results) Presentation (14 results)

  • [Journal Article] Structural basis for the decarboxylation of orotidine 5'-monophosphate(OMP)by Plasmodium falciparum OMP decarboxylase.2008

    • Author(s)
      K. Tokuoka, et. al.
    • Journal Title

      The Journal of Biochemistry 143巻

      Pages: 69-78

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis: Implications for catalytic mechanism.2008

    • Author(s)
      H. Tamura, et. al.
    • Journal Title

      Protein Science 17巻

      Pages: 126-135

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Novel cation-pi interaction revealed by crystal structure of thermoalk alophilic lipase.2008

    • Author(s)
      H. Matsumura, et. al.
    • Journal Title

      PROTEINS: Structure, Function, and Bioinformatics 70巻

      Pages: 592-598

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Effect of Solution Flow by Rotary Shaker on Protein Crystallization.2008

    • Author(s)
      R. Murai, et. al.
    • Journal Title

      Journal of Crystal Growth 310巻

      Pages: 2168-2172

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate.2008

    • Author(s)
      T. Nakamura, et. al.
    • Journal Title

      Proceedings of the National Academy of Sciences USA (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Structural basis for the decarboxylation of orotidine 5'-monophosphate (OMP) by Plasmodium Talon : Far= OMP decarboxylase.2008

    • Author(s)
      K., Tokuoka, et. al.
    • Journal Title

      The Journal of Biochemistry 143

      Pages: 69-78

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis : Implications for catalytic mechanism.2008

    • Author(s)
      H., Tamura, et. al.
    • Journal Title

      Protein Science 17

      Pages: 126-135

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Novel cation-pi interaction revealed by crystal structure of thermoalkalophilic lipase2008

    • Author(s)
      H., Matsumura, et. al.
    • Journal Title

      PROTEINS : Structure, Function, and Bioinformatics 70

      Pages: 592-598

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Effect of Solution Flow by Rotary Shaker on Protein Crystallization2008

    • Author(s)
      R., Murai, et. al.
    • Journal Title

      Journal of Crystal Growth 310

      Pages: 2168-2172

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate.2008

    • Author(s)
      T., Nakamura, et. al.
    • Journal Title

      Proceedings of the National Academy of Sciences USA (in press)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Preparation, crystallization and preliminary crystallographic analysis of old yellow enzyme from Trypanosoma cruzi.2007

    • Author(s)
      S. Sugiyama, et. al.
    • Journal Title

      Acta Crystallographica Section F 63巻

      Pages: 896-898

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Preparation, crystallization and preliminary crystallographic analysis of old yellow enzyme from Trypanosoma cruzi2007

    • Author(s)
      S., Sugiyama, et. al.
    • Journal Title

      Acta Crystallographica Section F 63

      Pages: 896-898

    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] The Crystal Structure of Orotidine 5' -monophosphate Decarboxylase from the Human Malaria Parasite Plasmodium falciparm.2008

    • Author(s)
      K. Tokuoka
    • Organizer
      The 1st International Global COE Symposium on Bio-Environmental Chemistry(GCOEBEC-1)
    • Place of Presentation
      Osaka(JAPAN)
    • Year and Date
      20080127-29
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] The Crystal Structure of Orotidine 5'-monophosphate Decarboxylase from the Human Malaria Parasite Plasmodium falciparm2008

    • Author(s)
      K., Tokuoka
    • Organizer
      The 1st International Global COE Sympo-sium on Bio-Environmental Chemistry
    • Place of Presentation
      Osaka (JAPAN)
    • Year and Date
      20080127-29
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Crystal Structure analysis of Prostagland in F_<2α> synthase.2007

    • Author(s)
      徳岡啓司
    • Organizer
      第80回日本生化学会大会・第30回日本分子生物学会年会 合同大会 (BMB2007)
    • Place of Presentation
      横浜
    • Year and Date
      20071211-15
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Crystal Structure analysis of Prostaglandin F2. synthase.2007

    • Author(s)
      K., Tokuoka
    • Organizer
      Biochemistry and Molecular Biology 2007
    • Place of Presentation
      Yokohama (JAPAN)
    • Year and Date
      20071211-15
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Trypanosoma cruzi由来Old Yellow EnzymeのX線結晶構造解析2007

    • Author(s)
      岡本尚毅
    • Organizer
      日本結晶学会2007年度年会および総会
    • Place of Presentation
      東京
    • Year and Date
      20071201-02
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 熱帯熱マラリア由来ピリミジン合成経路に関する酵素の結晶学的研究2007

    • Author(s)
      小西佐季
    • Organizer
      日本結晶学会2007年度年会および総会
    • Place of Presentation
      東京
    • Year and Date
      20071201-02
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] X-ray analysis of Old Yellow Enzyme from Trypanosoma cruzi2007

    • Author(s)
      N., Okamoto
    • Organizer
      Annual Meeting 2007 and General Assembly CrSJ2007 in Tokyo
    • Place of Presentation
      Tokyo (JAPAN)
    • Year and Date
      20071201-02
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Crystallographic studies on the enzymes in de novo pyrimidine biosynthesis of Human Malaria Parasite Plasmodium faciparum2007

    • Author(s)
      S., Konishi
    • Organizer
      Annual Meeting 2007 and General Assembly L'rSJ2007 in Tokyo
    • Place of Presentation
      Tokyo (JAPAN)
    • Year and Date
      20071201-02
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Preparation, crystallization and preliminary crystallographic analysis of old yellow enzyme from Trypanosoma cruzi.2007

    • Author(s)
      N. Okamoto
    • Organizer
      The 8th Conference of the Asian Crystallographic Association, AsCA' 07
    • Place of Presentation
      Taipei(TAIWAN)
    • Year and Date
      20071104-07
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Crystallization and preliminary X-ray analysis of the Ceraroidase from Pseudomonas aeruginosa.2007

    • Author(s)
      H. Okano
    • Organizer
      The 8th Conference of the Asian Crystallographic Association, AsCA' 07
    • Place of Presentation
      Taipei(TAIWAN)
    • Year and Date
      20071104-07
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Preparation, crystallization and preliminary crystallographic analysis of old yellow enzyme from Bypanosoma cruzi2007

    • Author(s)
      N., Okamoto
    • Organizer
      The 8th Conference of the Asian Crystallographic Association, AsCA'07
    • Place of Presentation
      Taipei (TAIWAN)
    • Year and Date
      20071104-07
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Crystallization and preliminary X-ray analysis of the Ceramidase from Pseudomonas aeruginosa2007

    • Author(s)
      H., Okano
    • Organizer
      The 8th Conference of the Asian Crystallographic Association, AsCA'07
    • Place of Presentation
      Taipei (TAIWAN)
    • Year and Date
      20071104-07
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Design of anti-allergic inhibitors for human hematopoietic prostagland in D synthase.2007

    • Author(s)
      T. Inoue
    • Organizer
      2nd International Symposium on Diffraction Structure Biology 2007(ISDSB2007)
    • Place of Presentation
      Tokyo(Japan)
    • Year and Date
      20070910-13
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Design of anti-allergic inhibitors for human hematopoietic prostaglandin D synthase2007

    • Author(s)
      T., Inoue
    • Organizer
      2nd International Symposium on Diffraction Structure Biology 2007 (ISDSB2007)
    • Place of Presentation
      Tokyo (JAPAN)
    • Year and Date
      20070910-13
    • Description
      「研究成果報告書概要(欧文)」より

URL: 

Published: 2010-02-04  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi