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2007 Fiscal Year Final Research Report Summary

Study of damaging processes induced by direct core-excitations of DNA using electron spectroscopy

Research Project

Project/Area Number 18540326
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Condensed matter physics I
Research InstitutionHigh Energy Accelerator Research Organization

Principal Investigator

KAZUHIKO Mase  High Energy Accelerator Research Organization, Institute of Materials Structure Science, Associate Professor (40241244)

Co-Investigator(Kenkyū-buntansha) KOBAYASHI Eiichi  High Energy Accelerator Research Organization (KEK), Kyushu Synchrotron Light Research Center, Researcher (80319376)
Project Period (FY) 2006 – 2007
KeywordsPhotoemission spectroscopy / DNA / Auger electron spectroscopy / Synchrotron radiation / Auver-photoelectron coincidence suectroscopy / electron-ion coincidence spectroscopy
Research Abstract

Study of radiation-induced damaging processes of DNA is an important topic in radiation biology. The elucidation of the processes in atomic levels using electron spectroscopy, however, is a frontier field. The damaging processes are -roughly classified into two categories; one is the direct damaging processes induced by the electronic transitions of DNA itself; and the other is indirect processes induced by radicals formed by electric transitions of molecules surrounding DNA such as water. For the direct processes, the following three-step process, i. e., core-excitations, Auger processes, and ion desorption (Auger-stimulated ion desorption) is thought to play an important role. The aim of the present study is to investigate core-excitations, Auger processes, and ion desorption of DNA using X-ray photoelectron spectroscopy, ion kinetic energy measurements, and coincidence spectroscopy, and to clarify the processes of chemical bond breaking induced by direct core-excitations of DNA.
We measured photoelectron photoion coincidence spectra and Auger-photoelectron coincidence spectra of DNA thiol self-assembled on gold surfaces. However most of the coincidence signals were smeared out by the accidental coincidence signals except for C-KVV-Auger-C-1s-photoelectron coincidence spectra. Since the signal/accidental ratio of the present coincidence spectrometer was found to be not sufficient enough, we have developed an improved apparatus for coincidence spectroscopy. We have improved an apparatus for the photoelectron spectroscopy at PF713L11D.

  • Research Products

    (34 results)

All 2008 2007 2006

All Journal Article (10 results) (of which Peer Reviewed: 5 results) Presentation (24 results)

  • [Journal Article] Construction and Evaluation of a Miniature Electron Ion Coincidence Analyzer Mounted on a Conflat Flange with an Outer Diameter of 114 mm2008

    • Author(s)
      Takuhiro Kakiuchi, Eiichi Kobayashi, Koji K. Okudaira, Narihiko Fujita, Masatoshi Tanaka, and Kazuhiko Mase
    • Journal Title

      Analytical Sciences 24

      Pages: 87-92

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Construction and Evaluation of a Miniature Electron Ion Coincidence Analyzer Mounted on a Conflat Flange with an Outer Diameter of 114 mm2008

    • Author(s)
      Takuhiro Kakiuchi, Eiichi Kobayashi, Koji K. Okudaira, Narihiko Fujita, Masatoshi Tanaka, Kazuhiko Mase
    • Journal Title

      Analytical Sciences 24

      Pages: 87-92

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] シングルバンチ放射光とミニチュア円筒鏡型分析器(CMA)を用いた脱離イオンの質量と運動エネルギー分布の同時測定-凝縮NH_3の内殻励起誘起H^+脱離研究への応用-2007

    • Author(s)
      小林英一・奥平幸司・間瀬一彦
    • Journal Title

      真空 50

      Pages: 530-533

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Development of a Miniature Double-Pass Cylindrical Mirror Electron Energy Analyzer (DPCMA), and Its Application to Auger Photoelectron Coincidence Spectroscopy (APECS)2007

    • Author(s)
      Eiichi Kobayashi, Junya Seo, Akira Nambu, Kazuhiko Mase
    • Journal Title

      Surface Science 601

      Pages: 3589-3592

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Development of an electron electron ion coincidence analyzer for Auger photoelectron coincidence spectroscopy (APECS) and electron ion coincidence (EICO) spectroscopy2007

    • Author(s)
      Takuhiro Kakiuchi, Eiichi Kobayashi, Naoyuki Okada, Ken Oyamada, Makoto Okusawa, Koji K. Okudaira, and Kazuhiko Mase
    • Journal Title

      J. Electron Spectrosc. Relat. Phenom. 161

      Pages: 164-171

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Recent progress in coincidence studies on ion desorption induced by core excitation2007

    • Author(s)
      Eiichi Kobayashi, Kazuhiko Mase, Akira Nambu, Junya Seo, Shinichiro Tanaka, Takuhiro Kakiuchi, Koji K. Okudaira, Shin-ichi Nagaoka, and Masatoshi Tanaka
    • Journal Title

      J. Phys. : Condens. Matter 18

      Pages: S1389-S1408

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] ###############################################################################################################################################################################################################################################################2007

    • Author(s)
      Eiichi Kobayashi, Koji K. Okudaira, Kazuhiko Mase
    • Journal Title

      Shinku(in Japanese) 50

      Pages: 530-533

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Development of a Miniature Double-Pass Cylindrical Mirror Electron Energy Analyzer(DPCMA), and Its Application to Auger Photoelectron Coincidence Spectroscopy(APECS)2007

    • Author(s)
      Eiichi Kobayashi, Junya Seo, Akira Nambu, Kazuhiko Mase
    • Journal Title

      Surf. Sci. 601

      Pages: 3589-3592

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Development of an electron electron ion coincidence analyzer for Auger photoelectron coincidence spectroscopy(APECS) and electron ion coincidence(EICO) spectroscopy2007

    • Author(s)
      Takuhiro Kakiuchi, Eiichi Kobayashi, Naoyuki Okada, Ken Oyamada, Makoto Okusawa, Koji K. Okudaira, Kazuhiko Mase
    • Journal Title

      J. Electron Spectrosc. Relat. Phenom. 161

      Pages: 164-171

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Recent progress in coincidence studies on ion desorption induced by core excitation2006

    • Author(s)
      Eiichi Kobayashi, Kazuhiko Mase, Akira Nambu, Junya Seo, Shinichiro Tanaka, Takuhiro Kakiuchi, Koji K. Okudaira, Shin-ichi Nagaoka, Masatoshi Tanaka
    • Journal Title

      J. Phys. : Condens. Matter 18

      Pages: S1389-S1408

    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Ion desorption dynamics induced by core-excitations of surface molecules using electron angle-resolved-photoion coincidence spectroscopy (招待講演)2007

    • Author(s)
      小林英一、間瀬一彦
    • Organizer
      The 11th Hiroshima International Symposium on Synchrotron Radiation
    • Place of Presentation
      広島県東広島市
    • Year and Date
      20070300
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Ion desorption dynamics induced by core-excitations of surface molecules using electron angle-resolved-photoion coincidence spectroscopy2007

    • Author(s)
      Eiichi Kobayashi, Kazuhiko Mase
    • Organizer
      The 11th Hiroshima International Symposium on Synchrotron Radiation
    • Place of Presentation
      Hiroshima, Japan
    • Year and Date
      20070300
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] コインシデンス分光法による内殻励起終状態・オージェ終状態における表面分子の原子移動の研究(口頭発表)2007

    • Author(s)
      間瀬一彦
    • Organizer
      科学研究費基盤研究(B)「内殻励起により誘起される原子移動緩和現象の理論とX線分光学」に関する研究会「電子格子相互作用による緩和動力学の多様性:局在性、量子コヒーレンス、低次元系、非平衡系」
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      20070200
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] ICF114マウントミニチュア電子-イオンコインシデンス分光装置の開発と性能評価(ポスター発表)2007

    • Author(s)
      垣内拓大、○藤田斉彦、小林英一、奥平幸司、間瀬一彦
    • Organizer
      第20回日本放射光学会年会・放射光科学合同シンポジウム
    • Place of Presentation
      広島県東広島市
    • Year and Date
      20070100
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] オージェ-光電子コインシデンス分光法を用いた酸化シリコン(SiO_2/Si)超薄膜の表面界面のサイト選択的オージェ電子スペクトルの測定による局所価電子状態の研究(口頭発表)2007

    • Author(s)
      垣内拓大、藤田斉彦、間瀬一彦
    • Organizer
      第21回日本放射光学会年会・放射光科学合同シンポジウム
    • Place of Presentation
      滋賀県大津市
    • Year and Date
      2007-12-14
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] コインシデンス分光による表面分子内殻励起誘起ダイナミクスの研究と表面分析への応用(口頭発表)2007

    • Author(s)
      間瀬一彦
    • Organizer
      日本真空協会産業部会12月定例部会
    • Place of Presentation
      東京都港区
    • Year and Date
      2007-12-06
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 高分解能コインシデンス分光による有機・生体分子薄膜の内殻励起(口頭発表)2007

    • Author(s)
      間瀬一彦
    • Organizer
      第3回放射光表面科学部会シンポジウム「放射光表面科学の最前線」
    • Place of Presentation
      東京都文京区
    • Year and Date
      2007-12-04
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] チオール化DNA自己組織化単分子膜のオージェ光電子コインシデンス分光(ポスター発表)2007

    • Author(s)
      瀬戸山寛之、垣内拓大、中村史夫、原 正彦、間瀬一彦
    • Organizer
      第1回分子科学討論会2007仙台
    • Place of Presentation
      宮城県仙台市
    • Year and Date
      2007-09-18
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] コインシデンス分光による内殻励起、オージェ緩和、イオン脱離の研究(ポスター発表)2007

    • Author(s)
      間瀬、間宮、森本、○垣内、小林、奥平、張、大岩、笠井、小笹、片岡、解良、小野、永松、塩野入、深川、末吉、藤井、浦、角田、中川、細海、満尾、田中、大野、藤田、奥沢・小山田、岡田、飯島、長岡、瀬戸山
    • Organizer
      第24回PFシンポジウム
    • Place of Presentation
      茨城県つくば市
    • Year and Date
      2007-03-15
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 電子-電子-イオンコインシデンス分光装置の開発、性能評価、SiO_2/Si(111)のサイト選択的Si LVVオージェ過程研究への応用(口頭発表)2006

    • Author(s)
      垣内拓大、小林英一、岡田直之、小山田健、奥沢誠、奥平幸司、間瀬一彦
    • Organizer
      第47回真空に関する連合講演会
    • Place of Presentation
      大阪府豊中市
    • Year and Date
      20061100
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] パルス放射光とミニチュア円筒鏡型分析器(CMA)を用いたイオンの質量と運動エネルギー分析(ポスター発表)2006

    • Author(s)
      小林英一、奥平幸司、間瀬一彦
    • Organizer
      第47回真空に関する連合講演会
    • Place of Presentation
      大阪府豊中市
    • Year and Date
      20061100
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] ICF114マウント電子-イオンコインシデンス分光装置の開発と性能評価(ポスター発表)2006

    • Author(s)
      垣内拓大、小林英一、奥平幸司、間瀬一彦
    • Organizer
      第47回真空に関する連合講演会
    • Place of Presentation
      大阪府豊中市
    • Year and Date
      20061100
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Development of an Electron Electron Ion Coincidence Apparatus and its Application for a Study of Desorption Induced by Electron Transitions (ポスター発表)2006

    • Author(s)
      垣内拓大、小林英一、小山田健、岡田直之、奥沢誠、奥平幸司、間瀬一彦
    • Organizer
      The University of Tokyo International Symposium and the Tenth ISSP International Symposium (ISSP-10) on Nanoscience at Surfaces
    • Place of Presentation
      千葉県柏市
    • Year and Date
      20061000
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Development of a Miniature Double Pass Cylindrical Mirror Electron Energy Analyzer (DPCMA), and Its Application for Auger-Photoelectron Coincidence Spectroscopy (APECS) (ポスター発表)2006

    • Author(s)
      小林英一、瀬尾淳哉、南部 英、間瀬一彦
    • Organizer
      The University of Tokyo International Symposium and the Tenth ISSP International Symposium (ISSP-10) on Nanoscience at Surfaces
    • Place of Presentation
      千葉県柏市
    • Year and Date
      20061000
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Simultaneous measurements of mass and kinetic energy distribution of desorbed ions using a compact cylindrical mirror analyzer (CMA) and synchrotron radiation in single-bunch operation (ポスター発表)2006

    • Author(s)
      小林英一、奥平幸司、間瀬一彦
    • Organizer
      The University of Tokyo International Symposium and the Tenth ISSP International Symposium (ISSP-10) on Nanoscience at Surfaces
    • Place of Presentation
      千葉県柏市
    • Year and Date
      20061000
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Development of an Electron Electron Ion Coincidence Apparatus and its Application for a Study of Desorption Induced by Electron Transitions2006

    • Author(s)
      Takuhiro Kakiuchi, Eiichi Kobayashi, Ken Oyamada, Naoyuki Okada, Makoto Okusawa, Koji K. Okudaira, Kazuhiko Mase
    • Organizer
      The University of Tokyo International Symposium and the Tenth ISSP International Symposium(ISSP-10) on Nanoscience at Surfaces
    • Place of Presentation
      Kashiwa-shi, Japan
    • Year and Date
      20061000
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Development of a Miniature Double Pass Cylindrical Mirror Electron Energy Analyzer(DPCMA), and Its Application for Auger-Photoelectron Coincidense Spectroscopy(APECS)2006

    • Author(s)
      Eiichi Kobayashi, Junya Seo, Akira Nambu, Kazuhiko Mase
    • Organizer
      The University of Tokyo International Symposium and the Tenth ISSP International Symposium(ISSP-10) on Nanoscience at Surfaces s
    • Place of Presentation
      Kashiwa-shi, Japan
    • Year and Date
      20061000
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Simultaneous measurements of mass and kinetic energy distribution of desorbed ions using a compact cylindrical mirror analyzer(CMA) and synchrotron radiation in single-bunch operation2006

    • Author(s)
      Eiichi Kobayashi, Koji K. Okudaira, Kazuhiko Mase
    • Organizer
      The University of Tokyo International Symposium and The tenth ISSP International Symposium(ISSP-10) on Nanoscience at Surfaces
    • Place of Presentation
      Kashiwa-shi, Japan
    • Year and Date
      20061000
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 電子-電子-イオンコインシデンス分光装置の開発・性能評価及び表面分子の内殻電子励起誘起ダイナミクス研究への応用(ポスター発表)2006

    • Author(s)
      垣内拓大,小林英一,岡田直之,小山田 健,奥沢 誠,奥平幸司,間瀬一彦
    • Organizer
      分子構造総合討論会2006
    • Place of Presentation
      静岡県静岡市
    • Year and Date
      20060900
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] 電子-電子-イオンコインシデンス分光装置の開発と性能評価(ポスター発表)2006

    • Author(s)
      垣内拓大、小林英一、岡田直之、小山田 健、奥沢 誠、奥平幸司、○間瀬一彦
    • Organizer
      日本物理学会2006年秋季大会
    • Place of Presentation
      千葉県千葉市
    • Year and Date
      20060900
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Core excitations, Auger decays, and ion desorption of surface molecules studied by Auger-photoelectron and electron-ion coincidence spectroscopy (招待講演)2006

    • Author(s)
      間瀬一彦
    • Organizer
      the International Conference on "Many particle spectroscopy of atoms, molecules, clusters and surfaces" on Synchrotron Radiation
    • Place of Presentation
      Roma, Italy
    • Year and Date
      20060600
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Core excitations, Auger decays, and ion desorption of surface molecules studied by Auger-photoelectron and electron-ion coincidence spectroscopy2006

    • Author(s)
      Kazuhiko Mase
    • Organizer
      the International Conference on Many particle spectroscopy of atoms, molecules, clusters and surfaces
    • Place of Presentation
      Roma, Italy
    • Year and Date
      20060600
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Development of a Miniature Cylindrical Mirror Analyzer (CMA) Involving a Time-of-Flight Ion Mass Spectrometer and Its Application for Ion Desorption Induced by Core-Electronic Transitions (ポスター発表)2006

    • Author(s)
      間瀬一彦、小林英一、奥平幸司
    • Organizer
      The ninth International Conference on Synchrotron Radiation Instrumentation (SRI 2006)
    • Place of Presentation
      Daegu、韓国
    • Year and Date
      20060500
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Development of a Miniature Cylindrical Mirror Analyzer(CMA) Involving a Time-of-Flight Ion Mass Spectrometer and Its Application for Ion Desorption Induced by Core-Electronic Transitions2006

    • Author(s)
      Kazuhiko Mase, Eiichi Kobayashi, Koji K. Okudaira
    • Organizer
      The ninth International Conference on Synchrotron Radiation Instrumentation(SRI 2006)
    • Place of Presentation
      Daegu, South Korea
    • Year and Date
      2006-03-30
    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2010-02-04  

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