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2007 Fiscal Year Final Research Report Summary

Study on the involvement of nuclear actin-related proteins in transcription, segregation, and damage repair of the genome

Research Project

Project/Area Number 18580087
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied biochemistry
Research InstitutionTohoku University

Principal Investigator

HARATA Masahiko  Tohoku University, Tohoku University, Graduate School of Agricultural Science, Associate Professor (70218642)

Project Period (FY) 2006 – 2007
Keywordsactin-related protein / chromatin / genome regulation / DNA repair / gene expression / chromosome segregation
Research Abstract

The actin family consists of conventional actins and various actin-related proteins (Arps). The members of the actin family was evolved from the common ancestral molecule and share the basal structure. The function of actin has been studied extensively for a long time. On the other hand, since the identification of Arps was first reported rather recently (in 1992), Arps have not yet been fully characterized or analyzed. In Saccharomyces cerevisiae, some of chromatin remodeling and histone acetyltransferase complexes, and these nuclear Arps have multiple functions including the regulation of chromatin remodeling and histone acetyltransferase complexes. Nuclear Arps of vertebrates are also supposed to possess similar function; however, identification and analyses of nuclear Arps in vertebrates are just beginning. We indicated that a nuclear Arp of human, hArp5, was localized in the nucleus as well as yeast Arp5p and these two had evolutionarily conserved functions. We also found that hArp5 shuttled between the nucleus and the cytoplasm as well as actin. Importantly, hArp5 depletion by siRNA caused defect in the accumulation of phosphorylated H2AX (gamma-H2AX) in the process of DNA double-strand break (DSB) repair. Taken together with the observations that hArp5 stably associates with the hIno80 chromatin remodeling enzyme and is required for chromatin binding of hIno80, it is suggested that hArp5 has a regulatory role in DSB repair through the chromatin remodeling machinery of the INO80 complex. Recent yeast studies show that the yeast INO80 complex is required also for DNA replication processes. We also showed that anther human nuclear Arp, hArp8, was involved in chromosome segregation.

  • Research Products

    (54 results)

All 2008 2007 2006 Other

All Journal Article (18 results) (of which Peer Reviewed: 6 results) Presentation (34 results) Book (2 results)

  • [Journal Article] Ino80 Chromatin Remodeling Complex Promotes Recovery of Stalled Replication Forks2008

    • Author(s)
      Shimada, 他
    • Journal Title

      Current Biology 18

      Pages: 566-575

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] The actin-related protein hArp8 accumulates on the mitotic chromosomes and functions in chromosome alignment2008

    • Author(s)
      Aoyama, 他
    • Journal Title

      Exp Cell Res 314

      Pages: 859-868

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] The actin-related protein hArp8 accumulates on the mitotic chromosomes and functions in chromosome alignment2008

    • Author(s)
      Aoyama et. al.
    • Journal Title

      Exp Cell Res. 314

      Pages: 859-868

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Ino80 Chromatin Remodeling Complex Promotes Recovery of Stalled Replication Forks2008

    • Author(s)
      Shimada et. al.
    • Journal Title

      Curr. Biol. 18

      Pages: 566-575

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] The nuclear actin-related protein Act3p/Arp4 influences yeast cell shape and bulk chromatin organization2007

    • Author(s)
      Miloshev, 他
    • Journal Title

      J Cell Biochem 104

      Pages: 59-67

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] The INO80 complex is required for damage-induced recombination.2007

    • Author(s)
      Kawashima, 他
    • Journal Title

      Biochem Biophys Res Commun 355

      Pages: 835-841

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] The INO80 complex is required for damage-induced recombination2007

    • Author(s)
      Kawashima et. al.
    • Journal Title

      Biochem Biophys Res Commun 355

      Pages: 835-841

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] The nuclear actin-related protein Act3p/Arp4 influences yeast cell shape and bulk chromatin organization2007

    • Author(s)
      Miloshev et. al.
    • Journal Title

      J Cell Biochem 104

      Pages: 59-67

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Vertebrate Arp6, a novel nuclear actin-related protein, interacts with heterochromatin protein 12006

    • Author(s)
      Ohfuchi E , et. al.
    • Journal Title

      Eur. J. Cell Biol. 85

      Pages: 411-421

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] Assembly of staphylococcal leukocidin into a pore-forming oligomer on detergent-resistant membrane microdomains, lipid rafts, in human polymorphonuclear leukocytes.2006

    • Author(s)
      Nishiyama , et. al.
    • Journal Title

      Biosci. Biotechnol. Biochem. 70

      Pages: 1300-1307

    • Description
      「研究成果報告書概要(和文)」より
    • Peer Reviewed
  • [Journal Article] 核の構造とその分子基盤2006

    • Author(s)
      原田昌彦
    • Journal Title

      蛋白質核酸酵素 51

      Pages: 591-599

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] クロマチン2006

    • Author(s)
      原田昌彦
    • Journal Title

      蛋白質核酸酵素 51

      Pages: 1943-1949

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Vertebrate Arp6, a novel nuclear actin-related protein, interacts with heterochromatin protein 12006

    • Author(s)
      Ohfuchi et. al.
    • Journal Title

      Eur. J. Cell Biol. 85

      Pages: 411-421

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Assembly of staphylococcal leukocidin into a pore-forming oligomer on detergent-resistant membrane microdomains, lipid rafts, in human polymorphonuclear leukocytes2006

    • Author(s)
      Nishiyama et. al.
    • Journal Title

      Biosci Biotechnol Biochem 70

      Pages: 1300-1307

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Nuclear structure: its molecular basis and dynamics2006

    • Author(s)
      Harata et. al.
    • Journal Title

      Tanpakushitu Kakusan Koso 51

      Pages: 591-599

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Chromatin2006

    • Author(s)
      Harata M.
    • Journal Title

      Tanpakushitu Kakusan Koso 51

      Pages: 1943-1949

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Nulcear actin-related proteins involved in the organization of euchromatin and heterochromatin2006

    • Author(s)
      Harata et. al.
    • Journal Title

      in DNA structure, chromatin, and gene expression eds. Shimizu M and Kiyama R. Transworld Research Network Inc

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Actin-related proteins involved in nuclear and chromatin dynamics

    • Author(s)
      Harata M.
    • Journal Title

      In: Nagata, S. and Takeyasu, K. (ed) Nuclear Dynamics: Approaches from Biochemistry, Molecular Cell Biology, and Visual Biology, Springer-Verlag Tokyo, Inc., Tokyo

    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] DNA二重鎖切断修復に関与するヒトアクチン関連タンパク質hArp5の機能解析2007

    • Author(s)
      加茂 真理子, 他
    • Organizer
      第30回日本分子生物学会年会・第80回日本生化学会大会合同大会
    • Place of Presentation
      横浜
    • Year and Date
      2007-12-12
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Actin-related protein Arp4 functions in kinetochore assembly2007

    • Author(s)
      Satoshi Kawashima, 他
    • Organizer
      第30回日本分子生物学会年会・第80回日本生化学会大会合同大会
    • Place of Presentation
      横浜
    • Year and Date
      2007-12-12
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] The human actin-related protein hArp5 has important roles in DSB repair2007

    • Author(s)
      Kamo ed. al.
    • Organizer
      Joint meeting of the Japanese Biochemical Society and the Molecular Biology Society of Japan 2007
    • Place of Presentation
      Yokohama
    • Year and Date
      2007-12-12
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Actin-related protein Arp4 functions in kinetochore assembly2007

    • Author(s)
      Kawashima ed. al.
    • Organizer
      Joint meeting of the Japanese Biochemical Society and the Molecular Biology Society of Japan 2007
    • Place of Presentation
      Yokohama
    • Year and Date
      2007-12-12
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 染色体ドメインの核内配置と遺伝子発現制御へのArp6の関与2007

    • Author(s)
      吉田 貴人, 他
    • Organizer
      酵母遺伝学フォーラム第40回年会
    • Place of Presentation
      大阪
    • Year and Date
      2007-09-12
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Arp6 has roles in the functional organization of chromatin domains in the nucleus2007

    • Author(s)
      Yoshida ed. al.
    • Organizer
      The 40^<th> annual meeting of Yeast Genetic Forum
    • Place of Presentation
      Osaka
    • Year and Date
      2007-09-12
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Actin-related protein hArp5: its nucleo-cytoplasmic shuttling and dynamic association with a chromatin remodeling enzyme2007

    • Author(s)
      Masahiko Harata, 他
    • Organizer
      32nd FEBS Congress-Molecular Machines-
    • Place of Presentation
      Vienna, Austria
    • Year and Date
      2007-07-10
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] ヒストンバリアントH2AZアイソフォームの同定と機能解析2007

    • Author(s)
      松田 涼, 他
    • Organizer
      日本生化学会東北支部第73回例会シンポジウム
    • Place of Presentation
      仙台
    • Year and Date
      2007-05-12
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Identification and functional analysis of H2AZ isoforms2007

    • Author(s)
      Matsuda ed. al.
    • Organizer
      The 73^<th> meeting of Tohoku branch of the Japanese Biochemical Society
    • Place of Presentation
      Sendai
    • Year and Date
      2007-05-12
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 染色体領域の核内配置決定と遺伝子発現制御へのArp6の関与2007

    • Author(s)
      原田 昌彦, 他
    • Organizer
      日本農芸化学会2007年度大会
    • Place of Presentation
      東京
    • Year and Date
      2007-03-27
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] ヒト細胞の分裂期染色体に局在するアクチン関連タンパク質hArp8の機能解析2007

    • Author(s)
      岡 麻子, 他
    • Organizer
      日本農芸化学会2007年度大会
    • Place of Presentation
      東京
    • Year and Date
      2007-03-27
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] DNA二重鎖切断修復に関与するヒトアクチン関連タンパク質hArp5の機能解析2007

    • Author(s)
      加茂 真理子, 他
    • Organizer
      日本農芸化学会2007年度大会
    • Place of Presentation
      東京
    • Year and Date
      2007-03-27
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Roles of Arp6 in the nuclear organization and gene transcription2007

    • Author(s)
      Yoshida ed. al.
    • Organizer
      The annual meeting of Japanese Society for Bioscience, Biotechnology, and Agrochemistry 2007
    • Place of Presentation
      Tokyo
    • Year and Date
      2007-03-27
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Functional analysis of hArp8 in the behavior of mitotic chromosomes2007

    • Author(s)
      Oka ed. al.
    • Organizer
      The annual meeting of Japanese Society for Bioscience, Biotechnology, and Agrochemistry 2007
    • Place of Presentation
      Tokyo
    • Year and Date
      2007-03-27
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Studies on hArp5 in DNA double strand break repair2007

    • Author(s)
      Kamo ed. al.
    • Organizer
      The annual meeting of Japanese Society for Bioscience, Biotechnology, and Agrochemistry 2007
    • Place of Presentation
      Tokyo
    • Year and Date
      2007-03-27
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 脊椎動物アクチン関連タンパク質Arp6の染色体核内配置への関与2007

    • Author(s)
      大渕 恵理, 他
    • Organizer
      第24回 染色体ワークショップ
    • Place of Presentation
      佐賀
    • Year and Date
      2007-01-31
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Involvement of the actin-related protein Arp6 in the organization of the nucleus2007

    • Author(s)
      Ohfuchi ed. al.
    • Organizer
      The 24^<th> Chromosome meeting
    • Place of Presentation
      Saga
    • Year and Date
      2007-01-31
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Actin-related protein hArp5: its nucleo-cytoplasmic shutting and dynamic association with a chromatin remodeling enzyme2007

    • Author(s)
      Harata ed. al.
    • Organizer
      32^<nd> FEBS Congress-Molecular Machines-
    • Place of Presentation
      Vienna
    • Year and Date
      2007-01-10
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] "Actin-related proteins involved in dynamics organization of chromatin and cell nucleus"2007

    • Author(s)
      Harata M (Invited speaker)
    • Organizer
      International Symposium-Functional Organization of the nucleus-
    • Place of Presentation
      淡路
    • Year and Date
      2007-01-09
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Involvement of the actin-related protein Arp6 of Saccharomyces cerevisiae in transcriptional regulation and perinuclear localization of telomere2007

    • Author(s)
      Yoshida T, 他
    • Organizer
      International Symposium Functional Organization of the Nucleus
    • Place of Presentation
      淡路
    • Year and Date
      2007-01-09
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Actin-related proteins involved in dynamics organization of chromatin and cell nucleus2007

    • Author(s)
      Harata, M
    • Organizer
      International Symposium-Functional Organization of the nucleus-
    • Place of Presentation
      Awaji
    • Year and Date
      2007-01-09
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Involvement of the actin-related protein Arp6 of Saccharomyces cerevisiae in transcriptional regulation and perinuclear localization of telomere2007

    • Author(s)
      Yoshida ed. al.
    • Organizer
      Internationsl Symposium-Functional Organization of the nucleus-
    • Place of Presentation
      Awaji
    • Year and Date
      2007-01-09
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] ChIP-chip法を用いたアクチン関連タンパク質Arp5の機能解析2006

    • Author(s)
      尾間 由佳子, 他
    • Organizer
      平成18年度日本農芸化学会北海道支部・東北支部合同支部会
    • Place of Presentation
      札幌
    • Year and Date
      2006-11-12
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Functinal analysis of the actin-related protein Arp5 by ChIP-chip analysis2006

    • Author(s)
      Oma ed. al.
    • Organizer
      Hokkaido and Tohoku branch meeting of Japanese Society for Bioscience, Biotechnology, and Agrochemistry 2006
    • Place of Presentation
      Sapporo
    • Year and Date
      2006-11-12
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] 細胞核・クロマチンのダイナミクスとアクチン関連タンパク質Arp62006

    • Author(s)
      原田昌彦
    • Organizer
      国立遺伝学研究所研究会「クロマチンダイナミクスとゲノム機能制御」
    • Place of Presentation
      三島
    • Year and Date
      2006-10-05
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] The actin-related protein Arp6 and dynamics of the nucleus and chromatin2006

    • Author(s)
      Harata M
    • Organizer
      Chromatin meeting in the National Institute of Genetics
    • Place of Presentation
      Mishima
    • Year and Date
      2006-10-05
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Involvement of the vertebrate actin-related protein Arp6 in heterochromatin organization.2006

    • Author(s)
      Ohfuchi E, 他
    • Organizer
      The 7th Transcription Meeting
    • Place of Presentation
      ハイデルベルグ
    • Year and Date
      2006-08-01
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Involvement of the vertebrate actin-related protein Arp6 in heterochromatin organization2006

    • Author(s)
      Ohfuchi ed. al.
    • Organizer
      Tjhe 7th Transcription Meeting
    • Place of Presentation
      Heidelberg, Germany
    • Year and Date
      2006-08-01
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] The INO80 and SWR1 chromatin remodeling complexes are required for the regulation of homologous recombination in Saccharomyces cerevisiae2006

    • Author(s)
      Kawashima S, 他
    • Organizer
      20th IUBMB International Congress of Biochemistry and Molecular Biology and 11th FAOBMB Congress
    • Place of Presentation
      京都
    • Year and Date
      2006-06-19
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] The nuclear actin-related protein Arp6 interacts with HP1 and is involved in chromosome segregation.2006

    • Author(s)
      Ohfuchi E, 他
    • Organizer
      20th IUBMB International Congress of Biochemistry and Molecular Biology and 11th FAOBMB Congress
    • Place of Presentation
      京都
    • Year and Date
      2006-06-19
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] Analysis of the nuclear actin-related proteins Arp5 and Arp6 of Saccahromyces cerevisiea on transcriptional regulation2006

    • Author(s)
      Oma Y, 他
    • Organizer
      20th IUBMB International Congress of Biochemistry and Molecular Biology and 11th FAOBMB Congress
    • Place of Presentation
      京都
    • Year and Date
      2006-06-19
    • Description
      「研究成果報告書概要(和文)」より
  • [Presentation] The INO80 and SER1 chromatin remodeling complexes are required for the regulation of homologous recombination in Saccharomyces cerevisiae2006

    • Author(s)
      Kawashima ed. al.
    • Organizer
      20th IUBMB International Congress of Biochemistry and Molecular Biology and 11th FAOBMB Congress 2006
    • Place of Presentation
      Kyoto
    • Year and Date
      2006-06-19
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] The nuclear actin-related protein Arp6 interacts with HP1 and is involved in chromosome segregation2006

    • Author(s)
      Ohfuchi ed. al.
    • Organizer
      20th IUBMB International Congress of Biochemistry and Molecular Biology and 11th FAOBMB Congress
    • Place of Presentation
      Kyoto
    • Year and Date
      2006-06-19
    • Description
      「研究成果報告書概要(欧文)」より
  • [Presentation] Analysis of the nuclear actin-related proteins Arp5 and Arp6 of Saccahromyces cerevisiea on transcriptional regulation2006

    • Author(s)
      Oma ed. al.
    • Organizer
      20th IUBMB Internatinal Congress of Biochemistry and Molecular Biology and 11th FAOBMB Congress
    • Place of Presentation
      Kyoto
    • Year and Date
      2006-06-19
    • Description
      「研究成果報告書概要(欧文)」より
  • [Book] DNA structure, chromation, and gene expression eds. Shimizu M and Kiyama R2006

    • Author(s)
      Harata M. , et. al.
    • Total Pages
      13
    • Publisher
      Transworld Research Network
    • Description
      「研究成果報告書概要(和文)」より
  • [Book] Nagata, S. and Takeyasu, K. (ed) Nuclear Dynamics: Approaches from Biochemistry, Molecular Cell Biology, and Visual Biology2006

    • Author(s)
      Harata M
    • Total Pages
      15
    • Publisher
      Springer-Verlag Tokyo, Inc., Kokyo
    • Description
      「研究成果報告書概要(和文)」より

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Published: 2010-02-04  

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