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2009 Fiscal Year Final Research Report

Experimental verification of acquisition of hemoprotein high-order functions by reverse molecular evolution

Research Project

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Project/Area Number 19570222
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Evolutionary biology
Research InstitutionHosei University

Principal Investigator

IMAI Kiyohiro  Hosei University, 生命科学部, 教授 (50028528)

Co-Investigator(Kenkyū-buntansha) TSUNESHIGE Antonio  法政大学, 生命科学部, 教授 (30409346)
NAGAI Masako  金沢大学, 名誉教授 (60019578)
Project Period (FY) 2007 – 2009
Keywordsヘム蛋白質 / 分子進化 / 分子設計 / 祖先型 / 遺伝子組換え
Research Abstract

On the basis of the sequence database for proteins now available, we constructed phylogenetic trees for myoglobin and inferred the amino acid sequences for two ancestor animal's myoglobins, one for mammalian and the other for fishes (reverse evolution). These ancestral myoglobins, synthesized in E. coli, showed high oxygen affinity, stable structure and lowered autooxidation rate compared to the corresponding extant neighbor animals, North American opossum and Zebra fish. Thus, it is considered that, in mammals and fishes, myoglobin has evolved so that oxygen binding function is adapted to environments at the sacrifice of structural stability and autooxidation.

  • Research Products

    (33 results)

All 2010 2009 2008 2007

All Journal Article (10 results) (of which Peer Reviewed: 10 results) Presentation (22 results) Book (1 results)

  • [Journal Article] Diffrerences in coordination states of substituted tyrosine residues and quaternary structures among hemoglobin M probed by resonacne Raman spectroscopy2010

    • Author(s)
      Y. Aki, M. Nagai, Y. Nagai, K. Imai, M. Aki, A. Sato, M. Kubo, S. Nagatomo, T. Kitagawa
    • Journal Title

      J. Biol. Inorg. Chem. 15

      Pages: 147-158

    • Peer Reviewed
  • [Journal Article] Functional evaluation of iron oxypyriporphyrin in protein heme pocket2008

    • Author(s)
      S. Neya, M. Suzuki, H. Ode, T. Hashimoto, Y. Furutani, H. Kandori, H. Hori, K. Imai, T. Komatsu
    • Journal Title

      Inorg. Chem. 47

      Pages: 10771-10778

    • Peer Reviewed
  • [Journal Article] Effect of reversed heme orientation on circular dichroism and cooperative oxygen binding of human adult hemoglobin2008

    • Author(s)
      M. Nagai, Y. Nagai, Y. Aki, K. Imai, Y. Wada, S. Nagatomo, Y. Yamamoto
    • Journal Title

      Biochemistry 47

      Pages: 517-525

    • Peer Reviewed
  • [Journal Article] Reduction in hemoglobin-oxygen affinity results in the improvement of exercise capacity in mice with chronic heart failure2008

    • Author(s)
      T. Watanabe, T. Takeda, S. Omiya, S. Hikoso, O. Yamaguchi, Y. Nakano, Y. Higuchi, A. Nakai, Y. Abe, Y. Aki-Jin, M. Taniike, I. Mizote, Y. Matsumura, T. Shimizu, K. Nishida, K. Imai, M. Hori, T. Shirasawa, K. Otsu
    • Journal Title

      J. Amer. College Cardiol. 52

      Pages: 779-786

    • Peer Reviewed
  • [Journal Article] Oxygenation properties of extracellular giant hemoglobin from Oligobrachia mashikoi2007

    • Author(s)
      Y. Aki, T. Nakagawa, M. Nagai, Y. Sasayama, Y. Fukumori, K. Imai
    • Journal Title

      Biochim. Biophys. Res. Commun 360

      Pages: 673-678

    • Peer Reviewed
  • [Journal Article] Changes of near-UV CD spectra of human hemoglobin upon the R→T quaternary structure transition2007

    • Author(s)
      Y. Aki-Jin, Y. Nagai, K. Imai, M. Nagai
    • Journal Title

      ACS Symposium Series on New Approaches in Biomedical Spectroscopy 963

      Pages: 297-311

    • Peer Reviewed
  • [Journal Article] Heme orientational disorder in human adult hemoglobin reconstituted with a ring Fluorinated heme and its functional consequences2007

    • Author(s)
      S. Nagao, Y. Hirai, S. Kawano, K. Imai, A. Suzuki, Y. Yamamoto
    • Journal Title

      Biochem. Biophys. Res. Commun 354(3)

      Pages: 681-685

    • Peer Reviewed
  • [Journal Article] 哺乳類ヘモグロビンの協同作用とボーア効果は協調して酸素の獲得と輸送を行っている-規範タンパク質における新たな視点-2007

    • Author(s)
      張岩、今井清博、小林道頼
    • Journal Title

      生物物理 47

      Pages: 167-173

    • Peer Reviewed
  • [Journal Article] Kosmotropic Salts from the Hofmeister Series Decrease the Oxygen Affinity of Human Hemoglobin A2007

    • Author(s)
      A. Tsuneshsige
    • Journal Title

      Fronteras Cientificas en el Siglo 21

      Pages: 93-101

    • Peer Reviewed
  • [Journal Article] Method for Determination of Association and Dissociation Rate Constants of Reversible Bimolecular Reactions by Isothermal Titration Calorimetry2007

    • Author(s)
      A. Tsuneshige
    • Journal Title

      Anal. Chem. 79

      Pages: 2972-2978

    • Peer Reviewed
  • [Presentation] Hemoglobin as the normative protein2009

    • Author(s)
      K. Imai
    • Organizer
      第47回日本生物物理学会年会「Symposium "Hemoglobin revisted"」
    • Place of Presentation
      徳島
    • Year and Date
      20091030-20091101
  • [Presentation] Structure and function of Root effect fish hemoglobins2009

    • Author(s)
      S. Unzai, K. Imai, T. Yokoyama, S. Park, K. Nagai, J. Tame
    • Organizer
      第47回日本生物物理学会年会「シンポジウム"ヘモグロビンはいま"」
    • Place of Presentation
      徳島
    • Year and Date
      20091030-20091101
  • [Presentation] Coordiation states of proximal or distal tyrosine residue in hemoglobins M and their quaternary structures probed by resonance Raman spectroscopy2009

    • Author(s)
      Y. Aki, M. Nagai, K. Imai, M. Aki, T. Kitagawa
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      徳島
    • Year and Date
      20091030-20091101
  • [Presentation] Tetramer-dimer equilibrium of chemically modified hemoglobin as studied by protein concentration- dependences of the oxygen equilibrium curve2009

    • Author(s)
      T. Inao, S. Kuriyama, K. Imai
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      徳島
    • Year and Date
      20091030-20091101
  • [Presentation] Relationship between oxygen affinity of myoglobin and the equililbrium constant of acid- alkaline transition in metmyoglobin2009

    • Author(s)
      T. Shibata, K. Mizuseki, S. Nagao, H. Tai, S. Nagatomo, A. Suzuki, K. Imai, Y. Yamamoto
    • Organizer
      14th International Conference on Biological Inorganic Chemistry
    • Place of Presentation
      Nagoya
    • Year and Date
      20090725-20090730
  • [Presentation] ヘム側鎖の修飾がミオグロビンの酸素親和性と酸塩基平衡に与える影響2009

    • Author(s)
      柴田友和、水関和哉、長尾聡、太虎林、長友重紀、鈴木秋弘、今井清博、山本泰彦
    • Organizer
      日本化学会第89回春期年会
    • Place of Presentation
      日大工学部(船橋市)
    • Year and Date
      20090327-20090330
  • [Presentation] Environmental alteration of three tryptophan residues in human adult hemoglobin (Hb A): A near-UV circular dichroism study2008

    • Author(s)
      K. Ohkubo, Y. Aki, K. Imai, Y. Nagai, M. Nagai
    • Organizer
      第46回生物物理学会年会
    • Place of Presentation
      博多
    • Year and Date
      20081203-20081205
  • [Presentation] Functional properties of mersaryl-modified hemoglobin (2)2008

    • Author(s)
      S. Kuriyama, Y. Aki, K. Imai
    • Organizer
      第46回生物物理学会年会
    • Place of Presentation
      博多
    • Year and Date
      20081203-20081205
  • [Presentation] Circular dichroism of the extracellular giant hemoglobin from annelied, Oligobrachia mashikoi2008

    • Author(s)
      T. Nakagawa, Y. Fukumori, K. Imai, M. Nagai
    • Organizer
      第46回生物物理学会年会
    • Place of Presentation
      博多
    • Year and Date
      20081203-20081205
  • [Presentation] Temperature- dependences of oxygen binding by myoglobin from animals with different body temperatures2008

    • Author(s)
      M. Ishida, M. Hashiride, I. Yamasaki, A. Yasuda, Y. Murakami, M. Ota, Y. Isogai, K. Imai
    • Organizer
      第46回生物物理学会年会
    • Place of Presentation
      博多
    • Year and Date
      20081203-20081205
  • [Presentation] Temperature-dependence of auto- oxidation of ancestral and closely related extant myoglobins (2)2008

    • Author(s)
      M. Ishida, Y. Murakami, A. Yasuda, I. Yamasaki, M. Ota, Y. Isogai, K. Imai
    • Organizer
      第46回生物物理学会年会
    • Place of Presentation
      博多
    • Year and Date
      20081203-20081205
  • [Presentation] Effect of Kosmotropic and chaotropic solutes on an allosteric protein under non-denaturing conditions2008

    • Author(s)
      A. Tsuneshige, Y. Yashiro
    • Organizer
      第46回生物物理学会年会
    • Place of Presentation
      博多
    • Year and Date
      20081203-20081205
  • [Presentation] Environmental alteration of three tryptophan residues in human adult hemoglobin upon ligand binding2008

    • Author(s)
      M. Nagai, Y. Nagai, Y. Aki, K. Imai, S. Nagatomo, T. Kitagawa
    • Organizer
      Proceedings of the XX1st International Conference on Raman Spectroscopy
    • Place of Presentation
      London
    • Year and Date
      20080800
  • [Presentation] 逆配向ヘムをもつヘモグロビンの酸素平衡機能と円二色性2008

    • Author(s)
      長井雅子、長井幸史、今井清博、安芸弥生、長友重紀、山本泰彦
    • Organizer
      第35回生体分子科学討論会講演要旨集
    • Place of Presentation
      兵庫県立先端科学支援センター
    • Year and Date
      20080619-20080620
  • [Presentation] Circular Dichroism and Oxygen Binding Properties of Human Adult Hemoglobin with Reversed Heme2008

    • Author(s)
      M. Nagai, Y. Nagai, Y. Aki, K. Imai, S. Nagatomo, Y. Yamamoto
    • Organizer
      Biophysical Society 52nd Annual Meeting and 16th International Biophysics Congress (IUPAB)
    • Place of Presentation
      Long Beach, California, USA
    • Year and Date
      20080202-20080206
  • [Presentation] 規範蛋白質としてのヘモグロビン2008

    • Author(s)
      今井清博
    • Organizer
      兵庫県立大学大学院生命理学研究科グローバルCOEプログラム「ピコバイオロジー:原子レベルの生命科学」グローバルCOE研究集会:ヘモグロビン-この未知なるもの-
    • Place of Presentation
      兵庫県立先端科学技術支援センター
    • Year and Date
      2008-11-21
  • [Presentation] ヘモグロビンの基本アロステリック単位2008

    • Author(s)
      常重アントニオ
    • Organizer
      兵庫県立大学大学院生命理学研究科グローバルCOEプログラム「ピコバイオロジー:原子レベルの生命科学」グローバルCOE研究集会:ヘモグロビン-この未知なるもの-
    • Place of Presentation
      兵庫県立先端科学技術支援センター
    • Year and Date
      2008-11-21
  • [Presentation] ヒトヘモグロビンにおける3つのトリプトファン残基の酸素結合にともなう変化:近紫外CDおよび紫外共鳴ラマン分光による研究2007

    • Author(s)
      長井雅子、長井幸史、小久保昭秀、川口裕貴、安藝弥生、今井清博、長友重紀、北川禎三
    • Organizer
      第45回日本生物物理学会年会
    • Place of Presentation
      横浜
    • Year and Date
      20071221-20071223
  • [Presentation] 有髭動物マシコヒゲムシのもつ巨大ヘモグロビンの酸素運搬機能2007

    • Author(s)
      安藝弥生、中川太郎、長井雅子、笹山雄一、福森義宏、今井清博
    • Organizer
      第45回日本生物物理学会年会
    • Place of Presentation
      横浜
    • Year and Date
      20071221-20071223
  • [Presentation] 酸素結合特性に対するpH及び温度の効果2007

    • Author(s)
      石田学、山崎伊織、村上祐太、太田元規、磯貝泰弘、今井清博:組み換え祖先型ミオグロビン
    • Organizer
      第45回日本生物物理学会年会
    • Place of Presentation
      横浜
    • Year and Date
      20071221-20071223
  • [Presentation] 祖先型と最近接現存種ミオグロビンの自動酸化反応の温度依存性2007

    • Author(s)
      石田学、村上祐太、安田温、山崎伊織、太田元規、磯貝泰弘、今井清博
    • Organizer
      第45回日本生物物理学会年会
    • Place of Presentation
      横浜
    • Year and Date
      20071221-20071223
  • [Presentation] 化学修飾ヘモグロビンの機能特性2007

    • Author(s)
      栗山紗子、安藝弥生、今井清博
    • Organizer
      第45回日本生物物理学会年会
    • Place of Presentation
      横浜
    • Year and Date
      20071221-20071223
  • [Book] Fronteras Cientificas en el Siglo XXI (Javier Navarro, Ed., Kosmotropic salts from the Hofmeister series decrease the oxygen affinity of human hemoglobin A)2007

    • Author(s)
      A. Tsuneshige, K. Imai, T. Haga
    • Total Pages
      93-101
    • Publisher
      Editorial Cordillera SAC

URL: 

Published: 2011-06-18   Modified: 2016-04-21  

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