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2011 Fiscal Year Final Research Report

Molecular mechanisms of plant immunity and its suppression by pathogens

Research Project

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Project/Area Number 19678001
Research Category

Grant-in-Aid for Young Scientists (S)

Allocation TypeSingle-year Grants
Research Field Plant pathology
Research InstitutionThe Institute of Physical and Chemical Research

Principal Investigator

SHIRASU Ken  独立行政法人理化学研究所, 植物免疫研究グループ, グループディレクター (20425630)

Project Period (FY) 2007 – 2011
Keywords遺伝子 / ゲノム / シグナル伝達 / 植物 / エフェクター / 構造解析 / 抵抗性タンパク質 / ユビキチン / シャペロン
Research Abstract

We determined crystal structure of the chaperone complex important for plant immunity. The structure of an effector from potato blight disease was also determined. Various screenings, such as reverse genetics and functional assays, revealed that U-box type E3 ubiquitin ligases and autophagy related proteins are negative regulators for plant immunity.

  • Research Products

    (53 results)

All 2012 2011 2010 2009 2008 Other

All Journal Article (21 results) (of which Peer Reviewed: 21 results) Presentation (19 results) Book (3 results) Remarks (6 results) Patent(Industrial Property Rights) (4 results) (of which Overseas: 2 results)

  • [Journal Article] Shotguns in the front line : Phosphoproteomics in plants2012

    • Author(s)
      Nakagami, H., Sugiyama, N., Ishihama, Y., and Shirasu, K.
    • Journal Title

      Plant Cell Physiol

      Volume: 53 Pages: 118-124

    • Peer Reviewed
  • [Journal Article] Sequence divergent RXLR effectors share a structural fold conserved across plant pathogenic oomycete species2012

    • Author(s)
      Win, J., Krasileva, K. V., Kamoun, S., Shirasu, K. Staskawicz, B. J., Banfield, M. J.
    • Journal Title

      PLoS Pathogens

      Volume: 8 Pages: e1002400

    • Peer Reviewed
  • [Journal Article] The HSP90 complex of plants2012

    • Author(s)
      Kadota, Y. and Shirasu, K.
    • Journal Title

      Biochimica et Biophysica Acta(BBA)-Molecular Cell Research

      Volume: 1823 Pages: 689-697

    • Peer Reviewed
  • [Journal Article] The main auxin biosynthesis pathway in Arabidopsis2012

    • Author(s)
      Mashiguchi, K., Tanaka, K., Sakai, T., Sugawara, S., Kawaide, H., Natsume, M., Hanada, H., Yaeno, T., Shirasu, K. Yao, H. McSteen, P., Zhao, Y., Hayashi, K., Kamiya, Y., Kasahara, H.
    • Journal Title

      Proc. Natl. Acad. Sci. USA

    • Peer Reviewed
  • [Journal Article] Phosphatidylinositol monophosphate-binding interface in the oomycete RXLR effector AVR3a is required for its stability in host cells to modulate plant immunity2011

    • Author(s)
      Yaeno, T., Li, H., Chaparro-Garcia, A., Schornack, S., Koshiba, S., Watanabe, S., Kigawa, T., Kamoun, S., and Shirasu, K.
    • Journal Title

      Proc. Natl. Acad. Sci. USA.

      Volume: 108 Pages: 14682-14687

    • Peer Reviewed
  • [Journal Article] Agrobacterium rhizogenes-mediated transformation of the parasitic plant Phtheirospermum japonicum2011

    • Author(s)
      Ishida, J. K., Yoshida, S., Ito, M., Namba, S. and Shirasu, K.
    • Journal Title

      PLoS One

      Volume: 6 Pages: e25802

    • Peer Reviewed
  • [Journal Article] Structural Basis for Assembly of Hsp90-Sgt1-CHORD Protein Complexes : Implications for Chaperoning of NLR Innate Immunity Receptors2010

    • Author(s)
      Zhang M., Kadota Y., Prodromou C., Shirasu K., and Pearl L. H.
    • Journal Title

      Molecular Cell

      Volume: 39 Pages: 269-281

    • Peer Reviewed
  • [Journal Article] Horizontal Gene Transfer by the Parasitic Plant Striga hermonthica2010

    • Author(s)
      Yoshida S., Maruyama S., Nozaki H., and Shirasu K.
    • Journal Title

      Science

      Volume: 328 Pages: 1128

    • Peer Reviewed
  • [Journal Article] A full-length enriched cDNA library and expressed sequence tag analysis of the parasitic weed, Striga hermonthica2010

    • Author(s)
      Yoshida S., Ishida K J., Kamal M N., Ali M A, Namba S. and Shirasu K.
    • Journal Title

      BMC Plant Biology

      Volume: 10 Pages: 55

    • Peer Reviewed
  • [Journal Article] Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants2010

    • Author(s)
      Nakagami H., Sugiyama N., Mochida K., Daudi A., Yoshida Y., Toyoda T., Tomita M., Ishihama Y. and Shirasu K.
    • Journal Title

      Plant Physiol

      Volume: 153 Pages: 1161-1174

    • Peer Reviewed
  • [Journal Article] Ubiquitination in plant immunity2010

    • Author(s)
      Trujillo M. and Shirasu K.
    • Journal Title

      Curr. Opin. in Plant Biol.

      Volume: 13 Pages: 402-408

    • Peer Reviewed
  • [Journal Article] NLR sensors meet at the SGT1HSP90 crossroad2010

    • Author(s)
      Kadota Y., Shirasu K. and Guerois R.
    • Journal Title

      Trends in Biochem. Sci

      Volume: 35 Pages: 199-206

    • Peer Reviewed
  • [Journal Article] Autophagy Negatively Regulates Cell Death by Controlling NPR1-Dependent Salicylic Acid Signaling during Senescence and the Innate Immune Response in Arabidopsis2009

    • Author(s)
      Yoshimoto K., Jikumaru Y., Kamiya Y., Kusano M., Consonni C., Panstruga R., Ohsumi Y. and Shirasu K.
    • Journal Title

      Plant Cell

      Volume: 60 Pages: 218-226

    • Peer Reviewed
  • [Journal Article] RRS1 and RPS4 provide a dual Resistance-gene system against fungal and bacterial pathogens2009

    • Author(s)
      Narusaka M., Shirasu K., Noutoshi Y., Kubo Y., Shiraishi T., Iwabuchi M. and Narusaka Y.
    • Journal Title

      Plant J

      Volume: 60 Pages: 218-226

    • Peer Reviewed
  • [Journal Article] Multiple layers of incompatibility to the parasitic witchweed, Striga hermonthica2009

    • Author(s)
      Yoshida, S. and Shirasu, K.
    • Journal Title

      New Phytologist

      Volume: 183(1) Pages: 180-189

    • Peer Reviewed
  • [Journal Article] The HSP90-SGT1 Chaperone Complex for NLR Immune Sensors2009

    • Author(s)
      Shirasu, K.
    • Journal Title

      Annual Review of Plant Biology

      Volume: 60 Pages: 139-164

    • Peer Reviewed
  • [Journal Article] Structural and functional analysis of SGT1-HSP90 core complex required for innate immunity in plants.2008

    • Author(s)
      Kadota, Y., Amigues, B., Ducassou, L., Madaoui, H., Ochsenbein, F., Guerois, R. and Shirasu, K.
    • Journal Title

      EMBO reports

      Volume: 9 Pages: 1209-1215

    • Peer Reviewed
  • [Journal Article] Structural and functional coupling of Hsp90-and Sgt1-centred multi-protein complexes2008

    • Author(s)
      Zhang, M., Boter, M., Li, K., Kadota, Y., Panaretou, B., Prodromou, C., Shirasu, K. and Pearl, L.
    • Journal Title

      EMBO J

      Volume: 27 Pages: 2789-2798

    • Peer Reviewed
  • [Journal Article] Negative regulation of PAMP-triggered immunity by E3 ubiquitin ligase triplet in Arabidopsis2008

    • Author(s)
      Trujillo, M., Ichimura, K., Casais, C. and Shirasu, K.
    • Journal Title

      Current Biology

      Volume: 18 Pages: 1396-1401

    • Peer Reviewed
  • [Journal Article] Inhibition of shoot branching by new terpenoid plant hormones2008

    • Author(s)
      Umehara, M., Hanada, A., Yoshida, S., Akiyama, K., Arite, T., Takeda-Kamiya, N., Magome, H., Kamiya, Y., Shirasu, K., Yoneyama, K., Kyozuka, J. and Yamaguchi, S.
    • Journal Title

      Nature

      Volume: 455 Pages: 195-200

    • Peer Reviewed
  • [Journal Article] Large-scale phosphorylation mapping reveales the extent of tyrosine phosphorylation in Arabidopsis2008

    • Author(s)
      Sugiyama, N., Nakagami, H., Mochida, K., Daudi, A., Tomita, M., Shirasu, K. and Ishihama, Y.
    • Journal Title

      Molecular Systems Biology

      Volume: 4 Pages: 493

    • Peer Reviewed
  • [Presentation] ハマウツボ科寄生植物のトランスクリプトーム解析2012

    • Author(s)
      吉田聡子, Ishida Juliane, Wafula Eric, dePamphilis Claude,白須賢
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都市日本
    • Year and Date
      2012-03-16
  • [Presentation] ジャガイモ疫病菌が分泌するRXLRエフェクターAVR3aの病原性機能にはホスファチジルイノシトールリン酸との結合が必要である2012

    • Author(s)
      八丈野孝,李華, Chaparro-Garcia Angela, Schornack Sebastian,小柴生造,渡部暁,木川隆則, Kamoun Sophien,白須賢
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都市日本
    • Year and Date
      2012-03-16
  • [Presentation] Genomic-scale analysis of the parastic plants-Towards understanding of the plant parasitism Plant Genomes & Biotechnology2011

    • Author(s)
      Yoshida. S, Ishida. J, Shirasu. K.
    • Organizer
      From Genes To Networks
    • Place of Presentation
      New York USA
    • Year and Date
      2011-12-01
  • [Presentation] 植物免疫関連タンパク質の構造機能解析2011

    • Author(s)
      白須賢
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都日本
    • Year and Date
      2011-09-23
  • [Presentation] Towards understanding the parasitisum of Striga Hermonthica2011

    • Author(s)
      Shirasu. K.
    • Organizer
      2011 International Plant Pathogenomics Conference
    • Place of Presentation
      Shenzhen China
    • Year and Date
      2011-01-25
  • [Presentation] Unravelling plant immunity signalling pathways with small molecules. Keystone Symposia2010

    • Author(s)
      Saska. I, Noutoshi. Y, Shirasu. K.
    • Organizer
      Receptors and Signaling in Plant Development and Biotic Interactions
    • Place of Presentation
      Tahoe City USA
    • Year and Date
      20100314-19
  • [Presentation] A large scale molecular analysis of the parastic plant Striga hermothica2010

    • Author(s)
      Shirasu. K.
    • Organizer
      International Symposium on Biodiversity Sciences(ISBDS2010)
    • Place of Presentation
      Nagoya Japan
    • Year and Date
      2010-08-02
  • [Presentation] Plant autophagy negatively regulates cell death by controlling salicylic acid signaling during senescence and the innate immune response2010

    • Author(s)
      Yoshimoto. K, Osumi. Y, Shirasu. K.
    • Organizer
      21st International Conference on Arabidopsis Research(ICAR 2010)
    • Place of Presentation
      Yokohama Japan
    • Year and Date
      2010-06-07
  • [Presentation] オートファジー能欠損シロイヌナズナにおけるプログラム細胞死促進の原因は過剰なサリチル酸シグナリングである2010

    • Author(s)
      吉本光希,大隅良典,白須賢
    • Organizer
      平成22年度日本植物病理学会大会
    • Place of Presentation
      京都日本
    • Year and Date
      2010-04-20
  • [Presentation] Towards understanding the parasitism of Striga hermonthica Crop2010

    • Author(s)
      Shirasu. K
    • Organizer
      Functional Genomics 2010
    • Place of Presentation
      Jeju Korea
    • Year and Date
      2010-04-15
  • [Presentation] ハイスループット無細胞タンパク質発現系を用いた病害抵抗性関連タンパク質の立体構造解析2009

    • Author(s)
      八丈野孝,門田康弘,五島美絵,大沢登,半田徳子,白水美香子,横山茂之,白須賢
    • Organizer
      平成21年度日本植物病理学会大会
    • Place of Presentation
      山形日本
    • Year and Date
      20090327-28
  • [Presentation] ケミカルバイオロジーによるシロイヌナズナ過敏感細胞死制御機構の解明2009

    • Author(s)
      能年義輝,白須賢
    • Organizer
      第50回日本植物生理学会年会
    • Place of Presentation
      名古屋日本
    • Year and Date
      20090321-24
  • [Presentation] ハイスループット無細胞発現系を用いた病害抵抗性関連タンパク質の立体構造解析2009

    • Author(s)
      八丈野孝,門田康弘,五島美絵,大沢登,半田徳子,白水美香子,横山茂之,白須賢
    • Organizer
      第50回日本植物生理学会年会
    • Place of Presentation
      名古屋日本
    • Year and Date
      20090321-24
  • [Presentation] 修飾されたタンパク質の解析技術(リン酸化)2009

    • Author(s)
      白須賢
    • Organizer
      第142回農林交流センターワークショップ
    • Place of Presentation
      つくば日本
    • Year and Date
      2009-11-19
  • [Presentation] Structural and functional analysis of the SGT1-RAR1-HSP90 complex required for plant immunity2009

    • Author(s)
      Kadota. Y, Zhang. M, Guerois. R, Prodromou. C, Pearl. L, Shirasu. K.
    • Organizer
      IS-MPMI 2009 XIV International Congress Quebec City
    • Place of Presentation
      Canada
    • Year and Date
      2009-07-21
  • [Presentation] 動植物共通の免疫レセプターの安定化に必須なSGT1-HSP90複合体の立体構造及び機能解析2009

    • Author(s)
      門田康弘, Boter Marta, Zhang Minghao, Amigues Beatrice, Prodromou Chrisostomos, Pearl Laurence, Guerois Raphael,白須賢
    • Organizer
      第50回日本植物生理学会年会
    • Place of Presentation
      名古屋日本
    • Year and Date
      2009-03-21
  • [Presentation] Plant autophagy negatively regulates senescence by eliminating salicylic acid signaling2008

    • Author(s)
      Yoshimoto. K, Ohsumi. Y, Shirasu. K
    • Organizer
      Gordon Research Conferences on Plant Senescence South Hadley USA
    • Year and Date
      20080615-20
  • [Presentation] Structural and functional analysis of RAR1-SGT1-HSP90 complex2008

    • Author(s)
      Kadota. Y, Boter. M, Zhang. M, Amigues. B, Prodromou. C, Pearl. L, Guerois. R, Shirasu. K
    • Organizer
      Keystone Symposia on Molecular and Cellular Biology Keystone USA
    • Year and Date
      20080210-15
  • [Presentation] Structure and Function of the N-terminal Domain of Hsp90 in Complex with the CS-domain of Sgt12008

    • Author(s)
      Zhang. M, Boter. M, Li. K, Kadota. Y, Panaretou. B, Prodromou. C, Shirasu. K, Pearl. L.
    • Organizer
      4th International Conference on The Hsp90 Chaperone Machine Bavaria Germany
    • Year and Date
      2008-10-03
  • [Book] "相互認識遺伝子とその産物"植物病理学2010

    • Author(s)
      白須賢
    • Total Pages
      148-153
    • Publisher
      文永堂出版
  • [Book] Plant Mitogen-Activated Protein Kinase Cascades in Signaling Crosstalk, In "Signal Crosstalk in Plant Stress Responses"2009

    • Author(s)
      Takahashi, F., Ichimura, K., Shinozaki, K., and Shirasu, K
    • Total Pages
      23-38
  • [Book] "植物免疫,防御"植物の百科事典2009

    • Author(s)
      白須賢
    • Total Pages
      32-33
    • Publisher
      朝倉書店
  • [Remarks] Plant Cell(2009)について:科学新聞(2009.10.16)、日経産業新聞(2009.9.25)新聞報道

  • [Remarks] Molecular Cell(2009)について:科学新聞(2010.8.6)、日刊工業新聞(2010.7.30)新聞報道

  • [Remarks] Plant Physiol.(2010)について:日経産業新聞(2010.7.29)、化学工業日報(2010.7.12)新聞報道

  • [Remarks] Science(2010)について:日経産業新聞(2010.6.3)、化学工業日報(2010.5.28)新聞報道

  • [Remarks]

    • URL

      http://ksg.psc.riken.jp/

  • [Remarks]

    • URL

      http://ksg.psc.riken.jp/index.en.html

  • [Patent(Industrial Property Rights)] 複数の病害に対して抵抗性を示す植物及びその作出法2009

    • Inventor(s)
      鳴坂義弘、鳴坂真理、白須賢
    • Industrial Property Rights Holder
      岡山県、(独)理化学研究所
    • Industrial Property Number
      国際出願、IBPF09-510WO
    • Filing Date
      2009-07-29
    • Overseas
  • [Patent(Industrial Property Rights)] 植物病害抵抗性誘導剤2009

    • Inventor(s)
      能年義輝、白須賢
    • Industrial Property Rights Holder
      (独)理化学研究所
    • Industrial Property Number
      国際出願、PH-3949-PCT
    • Filing Date
      2009-03-27
    • Overseas
  • [Patent(Industrial Property Rights)] 複数の病害に対して抵抗性を示す植物及びその作出法2008

    • Inventor(s)
      鳴坂義弘、鳴坂真理、白須賢
    • Industrial Property Rights Holder
      岡山県、(独)理化学研究所
    • Industrial Property Number
      特許願、2008-198517
    • Filing Date
      2008-07-31
  • [Patent(Industrial Property Rights)] 植物病害抵抗性誘導剤2008

    • Inventor(s)
      能年義輝、白須賢
    • Industrial Property Rights Holder
      (独)理化学研究所
    • Industrial Property Number
      特許願、2008-88491
    • Filing Date
      2008-03-28

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Published: 2013-07-31  

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