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2010 Fiscal Year Final Research Report

Development of highly accurate Multi-Component Molecular Theory and its application

Research Project

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Project/Area Number 20350013
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Physical chemistry
Research InstitutionYokohama City University

Principal Investigator

TACHIKAWA Masanori  Yokohama City University, 生命ナノシステム科学研究科, 教授 (00267410)

Co-Investigator(Kenkyū-buntansha) MAEZONO RYO  北陸先端科学技術大学院大学, 情報科学研究科, 講師 (40354146)
Co-Investigator(Renkei-kenkyūsha) KITA YUKIUMI  横浜市立大学, 生命ナノシステム科学研究科, 助教 (40453047)
Project Period (FY) 2008 – 2010
Keywords多成分系分子理論 / 多成分系密度汎関数法 / 多成分系量子モンテカルロ法 / 陽電子化合物 / 水素結合 / H / D同位体効果 / Colle-Salvetti型相関関数 / 多成分系経路積分法
Research Abstract

We have developed highly accurate Multi-Component Molecular Theory, such as multi-component quantum Monte Carlo and ab initio path integral molecular dynamics. Multi-component quantum Monte Carlo has been applied to some positronic compounds, and obtained the lowest variational energies. Ab initio path integral molecular dynamics simulation of M+(H3O2-) (M=Li, Na, and K) has been carried out to analyze how the structure and dynamics of low-barrier hydrogen-bonded Zundel anion, H3O2-, can be affected by the counter alkali metal cation, M+. Our simulation predicts that the quantum proton transfer in Zundel anion can be strongly coupled to the motion of counter cation located nearby.

  • Research Products

    (42 results)

All 2011 2010 2009 2008 Other

All Journal Article (41 results) (of which Peer Reviewed: 41 results) Remarks (1 results)

  • [Journal Article] Ab initio path integral simulation of AgOH(H2O)2011

    • Author(s)
      A. Koizumi, K. Suzuki, M. Shiga, M. Tachikawa
    • Journal Title

      Int.J.Quant.Chem. in press

    • Peer Reviewed
  • [Journal Article] Theoretical study of the reversible photoconversion mechanism in Dronpa2011

    • Author(s)
      J. Koseki, Y. Kita, U. Nagashima, M. Tachikawa
    • Journal Title

      Procedia Comput.Sci. in press

    • Peer Reviewed
  • [Journal Article] Molecular dynamics simulation for irreversible feature of green fluorescent protein before and after photoactivation2011

    • Author(s)
      J. Koseki, Y. Kita, M. Tachikawa
    • Journal Title

      Chem.Lett. 40

      Pages: 476-477

    • Peer Reviewed
  • [Journal Article] Theoretical investigations of nuclear quantum effect on molecular magnetic properties based on multi-component density functional theory2011

    • Author(s)
      Y. Kita, M. Tachikawa
    • Journal Title

      Comp.Theor.Chem. in press

    • Peer Reviewed
  • [Journal Article] Ab initio quantum chemical study on the mechanism of exceptional behavior of lysine for ion yields in MALDI-Role of vibrational entropic contribution in thermally averaged proton affinities-2011

    • Author(s)
      M. Hatakeyama, M. Tachikawa
    • Journal Title

      J.Mass Spectrometry in press

    • Peer Reviewed
  • [Journal Article] Path integral molecular dynamics for hydrogen adsorption site of zeolite-templated carbon with semi-empirical PM3 potential2011

    • Author(s)
      K. Suzuki, M. Kayanuma, M. Tachikawa, H. Ogawa, H. Nishihara, T. Kyotani, U. Nagashima
    • Journal Title

      Comp.Theor.Chem. in press

    • Peer Reviewed
  • [Journal Article] A concerted mechanism between protron transfer of Zundel anion and displacement of counter cation2011

    • Author(s)
      A. Koizumi, K. Suzuki, M. Shiga, M. Tachikawa
    • Journal Title

      J.Chem.Phys.(communication) 134

      Pages: 031101(3)

    • Peer Reviewed
  • [Journal Article] Nuclear quantum effect on the dissociation energies of cationic hydrogen clusters2011

    • Author(s)
      M. Sugimoto, M. Shiga, M. Tachikawa
    • Journal Title

      Comp.Theor.Chem. in press

    • Peer Reviewed
  • [Journal Article] Theoretical study on mechanisms of structural rearrangement and ionic dissociation in the HCl(H_2O)_4 cluster with path-integral molecular dynamics simulations2011

    • Author(s)
      S. Sugawara, T. Yoshikawa, T. Takayanagi, M. Tachikawa
    • Journal Title

      Chem.Phys.Lett. 501

      Pages: 238-244

    • Peer Reviewed
  • [Journal Article] Bound states of positron with nitrile species with configuration interaction multi-component molecular orbital approach2011

    • Author(s)
      M. Tachikawa, Y. Kita, R.J. Buenker
    • Journal Title

      Phys.Chem.Chem.Phys. 13

      Pages: 2701-2705

    • Peer Reviewed
  • [Journal Article] Nuclear quantum effect on hydrogen adsorption site of zeolite-templated carbon model using path integral molecular dynamics2010

    • Author(s)
      K. Suzuki, M. Kayanuma, M. Tachikawa, H. Ogawa, H. Nishihara, T. Kyotani, U. Nagashima
    • Journal Title

      J.Alloys and Compounds in press

    • Peer Reviewed
  • [Journal Article] A Variational Monte Carlo Study of Positronic Compounds Using Inhomogeneous Backflow Transformations2010

    • Author(s)
      Y. Kita, M. Tachikawa, N.D. Drummond, R.J. Needs
    • Journal Title

      Chem.Lett. 39

      Pages: 1136-1137

    • Peer Reviewed
  • [Journal Article] Theoretical study on the mechanism of double proton transfer in porphycene by path-integral molecular dynamics simulations2010

    • Author(s)
      T. Yoshikawa, S. Sugawara, T. Takayanagi, M. Shiga, M. Tachikawa
    • Journal Title

      Chem.Phys.Lett. 496

      Pages: 14-19

    • Peer Reviewed
  • [Journal Article] First-principles calculation and transmission electron microscopy observation for hydrogen adsorption on carbon nanowalls2010

    • Author(s)
      Y. Kita, S. Hayashi, I. Kinoshita, M. Tachibana, M. Tachikawa, K. Kobayashi, M. Tanimura
    • Journal Title

      J.Appl.Phys. 108

      Pages: 013703(4)

    • Peer Reviewed
  • [Journal Article] The chemical shift of deprotonated water dimer : Ab initio path integral simulation2010

    • Author(s)
      M. Shiga, K. Suzuki, M. Tachikawa
    • Journal Title

      J.Chem.Phys. 132

      Pages: 114104(7)

    • Peer Reviewed
  • [Journal Article] Efficient ab initio path integral hybrid Monte Carlo based on the fourth-order Trotter expansion : Application to fluoride ion-water cluster2010

    • Author(s)
      K. Suzuki, M. Tachikawa, M. Shiga
    • Journal Title

      J.Chem.Phys. 132

      Pages: 144108(7)

    • Peer Reviewed
  • [Journal Article] Formation of Schiff-base for photoreaction mechanism of red shift of GFP spectra2010

    • Author(s)
      J. Koseki, Y. Kita, M. Tachikawa
    • Journal Title

      Biophys.Chem. 147

      Pages: 140-145

    • Peer Reviewed
  • [Journal Article] Geometric Isotope Effect on Low Barrier Hydrogen-Bonding Systems of Acetic Acid Dimer, Formic Acid Dimer, and Their Anionic Clusters by Using the Multi-Component Molecular Orbital Method2010

    • Author(s)
      M. Kaneko, T. Udagawa, M. Tachikawa
    • Journal Title

      J.Comp.Chem.Jpn. 9

      Pages: 21-28

    • Peer Reviewed
  • [Journal Article] Optimized Molecular Exponents on Gaussian Basis Sets for Hybrid Orbitals of Hydrocarbon Molecules2010

    • Author(s)
      T. Ishimoto, M. Tachikawa
    • Journal Title

      J.Comp.Chem.Jpn. 9

      Pages: 15-20

    • Peer Reviewed
  • [Journal Article] Systematic Improvement of Energy-Components by Simultaneous Optimization of Exponents and Centers of Gaussian-Type Function Basis Sets for Molecular Self-Consistent-Field Wave Functions2010

    • Author(s)
      T. Ishimoto, M. Tachikawa
    • Journal Title

      J.Comp.Chem.Jpn. 9

      Pages: 1-8

    • Peer Reviewed
  • [Journal Article] Nuclear Quantum Effect on Molecular Magnetic Properties for Low Barrier Hydrogen-bonded Systems Based on Multi-component Density Functional Theory2009

    • Author(s)
      Y. Kita, T. Udagawa, M. Tachikawa
    • Journal Title

      Chem.Lett. 38

      Pages: 1156-1157

    • Peer Reviewed
  • [Journal Article] Path-integral molecular dynamics simulations of glycine・(H_2O)_n(n=1-7) clusters on semiempirical PM6 potential energy surfaces2009

    • Author(s)
      T. Yoshikawa, H. Motegi, A. Kakizaki, T. Takayanagi, M. Shiga, M. Tachikawa
    • Journal Title

      Chem.Phys. 365

      Pages: 60-68

    • Peer Reviewed
  • [Journal Article] Positron binding properties for F-(H_2O)_n and Cl-(H_2O)_n (n=0-3) clusters2009

    • Author(s)
      Y. Kita, M. Tachikawa
    • Journal Title

      Chem.Phys.Lett. 482

      Pages: 201-206

    • Peer Reviewed
  • [Journal Article] Ab initio quantum Monte Carlo study of the positronic hydrogen cyanide molecule2009

    • Author(s)
      Y. Kita, R. Maezono, M. Tachikawa, M. Towler, R.J. Needs
    • Journal Title

      J.Chem.Phys. 251

      Pages: 134310(6)

    • Peer Reviewed
  • [Journal Article] Theoretical analysis of H/D geometric isotope effect on adenine-thymine base pair using multi-component molecular orbital method2009

    • Author(s)
      T. Udagawa, M. Tachikawa
    • Journal Title

      J.Mol.Structure(Theochem) 912

      Pages: 63-66

    • Peer Reviewed
  • [Journal Article] Ab initio post-HF study of guanine dimer isomers involving imino forms in gas phase2009

    • Author(s)
      K. Takahashi, M. Tachikawa
    • Journal Title

      J.Mol.Structure(Theochem) 912

      Pages: 44-52

    • Peer Reviewed
  • [Journal Article] Path-integral molecular dynamics simulations of hydrated hydrogen chloride cluster HCl(H_2O)_4 on a semiempirical potential energy surface2009

    • Author(s)
      T. Takayanagi, K. Takahashi, A. Kakizaki, M. Shiga, M. Tachikawa
    • Journal Title

      Chem.Phys. 358

      Pages: 196-202

    • Peer Reviewed
  • [Journal Article] Nuclear quantum effects on molecular magnetic properties2009

    • Author(s)
      Y. Kita, M. Tachikawa
    • Journal Title

      J.Mol.Structure(Theochem) 912

      Pages: 2-4

    • Peer Reviewed
  • [Journal Article] Path-integral molecular dynamics simulations of small hydrated sulfuric acid clusters H_2SO_4(H_2O)_n (n=1-6) on semiempirical PM6 potential surfaces2009

    • Author(s)
      A. Kakizaki, H. Motegi, T. Yoshikawa, T. Takayanagi, M. Shiga, M. Tachikawa
    • Journal Title

      J.Mol.Structure(Theochem) 901

      Pages: 1-8

    • Peer Reviewed
  • [Journal Article] Ab initio fragment molecular orbital (FMO) analysis of the structure of the phosphoinositide-binding peptide from gelsolin2009

    • Author(s)
      M. Tada, T. Nagasima, T. Udagawa, M. Tachikawa, H. Sugawara
    • Journal Title

      J.Mol.Structure(Theochem) 897

      Pages: 149-153

    • Peer Reviewed
  • [Journal Article] Evaluation of molecular integral of Cartesian Gaussian type basis function with complex-valued center coordinates and exponent via the McMurchie-Davidson recursion formula, and its application to electron dynamics2009

    • Author(s)
      T. Kuchitsu, J. Okuda, M. Tachikawa
    • Journal Title

      Int.J.Quant.Chem. 109

      Pages: 540-548

    • Peer Reviewed
  • [Journal Article] Multi-Component First-Principles Calculation on Isotope Effect in Hydrogen-Bonded Dielectric Materials K_3H(SO_4)_2 and K_3D(SO_4)_22008

    • Author(s)
      M. Tachikawa
    • Journal Title

      Integrated Ferroelectrics 100

      Pages: 72-78

    • Peer Reviewed
  • [Journal Article] Ultraviolet Spectroscopy and Theoretical Calculations of Mono-and Dihydrated Clusters of the Guanine Nucleosides:Possibility of Different Hydration Structures for Guanosine and 2'-Deoxyguanosine2008

    • Author(s)
      H. Saigusa, N. Mizuno, H. Asami, K. Takahashi, M. Tachikawa
    • Journal Title

      Bull.Chem.Soc.Jap. 81

      Pages: 1274-1281

    • Peer Reviewed
  • [Journal Article] Temperature and isotope effects on water cluster ions with path integral molecular dynamics based on 4th order Trotter expansion2008

    • Author(s)
      K. Suzuki, M. Shiga, M. Tachikawa
    • Journal Title

      J.Chem.Phys. 129

      Pages: 144310(8)

    • Peer Reviewed
  • [Journal Article] Molecular dynamics simulations of small glycine-(H_2O)_n (n=2-7) clusters on semiempirical PM6 potential energy surfaces2008

    • Author(s)
      T. Takayanagi, T. Yoshikawa, A. Kakizaki, M. Shiga, M. Tachikawa
    • Journal Title

      J.Mol.Structure(Theochem) 869

      Pages: 29-36

    • Peer Reviewed
  • [Journal Article] Quantum Monte Carlo study of porphyrin transition metal complexes2008

    • Author(s)
      J. Koseki, R. Maezono, M. Tachikawa, M.D. Towler, R.J. Needs
    • Journal Title

      J.Chem.Phys. 128

      Pages: 085103(5)

    • Peer Reviewed
  • [Journal Article] Film Formation from Mixed Solutions of 1,3,5-Triazine-2,4-dithione and Phosphate onto Au, Ag, and Cu Substrates2008

    • Author(s)
      M. Yamamoto, M. Suzuki, M. Tachikawa, A. Fujishima, T. Miyazaki, H. Hisamitsu, K. Kojima, Y. Kadoma
    • Journal Title

      J.Phys.Chem.C 112

      Pages: 6914-6923

    • Peer Reviewed
  • [Journal Article] Simultaneous analytical optimization of variational parameters in Gaussian-type functions with full configuration interaction of multi-component molecular orbital method by elimination of translational and rotational methods : Application to isotopomers of the hydrogen molecule2008

    • Author(s)
      T. Ishimoto, M. Tachikawa, U. Nagashima
    • Journal Title

      J.Chem.Phys. 128

      Pages: 164118(9)

    • Peer Reviewed
  • [Journal Article] Geometric Isotope Effect on the N_2H_7^+ Cation and N_2H_5^- Anion by Ab Initio Path Integral Molecular Dynamics Simulation2008

    • Author(s)
      H. Ishibashi, A. Hayashi, M. Shiga, M. Tachikawa
    • Journal Title

      ChemPhysChem(Communication) 9

      Pages: 383-387

    • Peer Reviewed
  • [Journal Article] Ab initio interpretation of Hund's rule for the methylene molecule : Variational optimization of its molecular geometries and energy component analysis2008

    • Author(s)
      Y. Maruyama, K. Hongo, M. Tachikawa, Y. Kawazoe, H. Yasuhara
    • Journal Title

      Int.J.Quant.Chem. 108

      Pages: 731-743

    • Peer Reviewed
  • [Journal Article] Analytical optimization of exponent values in protonic and deuteronic Gaussian-type functions by elimination of translational and rotational motions from multi-component molecular orbital scheme2008

    • Author(s)
      T. Ishimoto, M. Tachikawa, U. Nagashima
    • Journal Title

      Int.J.Quant.Chem. 108

      Pages: 472-481

    • Peer Reviewed
  • [Remarks] ホームページ等

    • URL

      http://www-user.yokohama-cu.ac.jp/~tachi/

URL: 

Published: 2012-01-26   Modified: 2016-04-21  

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