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2011 Fiscal Year Final Research Report

Study on evolution by lattice Lotka-Volterra method

Research Project

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Project/Area Number 20500204
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Sensitivity informatics/Soft computing
Research InstitutionShizuoka University

Principal Investigator

TAINAKA Kei-ichi  静岡大学, 創造科学技術大学院, 教授 (30142227)

Co-Investigator(Kenkyū-buntansha) YOSHIMURA Jin  静岡大学, 創造科学技術大学院, 教授 (10291957)
Co-Investigator(Renkei-kenkyūsha) ROSENZWEIG M.  アリゾナ大学, 教授
Project Period (FY) 2008 – 2011
Keywords格子ロトカボルテラ模型 / 数値シミュレーション / 生物進化 / 酵母菌 / 最適化 / ゲーム理論
Research Abstract

Since 1988, we have developed lattice version of Lotka-Volterra model as an individual-based model. Main results are as follows : 1. A simple population theory for mutualism : We derived simplest equations which contain essential features of mutualism. 2. In vivo study on the density effect of budding yeasts. We find two new events at inflection point of logistic growth : sudden stop of reproduction in daughter cells and mass explosion(apoptosis) of aged mother cells.

  • Research Products

    (12 results)

All 2011 2010 2009 Other

All Journal Article (9 results) (of which Peer Reviewed: 8 results) Presentation (2 results) Remarks (1 results)

  • [Journal Article] A simple population theory for mutualism by the use of lattice gas model2011

    • Author(s)
      S. Iwata, K. Kobayashi, S. Higa, J. Yoshimura and K. Tainaka.
    • Journal Title

      Ecological Modelling

      Volume: 222 Pages: 2042-2048

    • Peer Reviewed
  • [Journal Article] Apoptosis at inflection point in liquid culture of budding yeasts2011

    • Author(s)
      T. Hagiwara, T. Ushimaru, K. Tainaka, H. Kurachi, J. Yoshimura.
    • Journal Title

      PLoS ONE

      Volume: 6(4) Pages: 19224

    • Peer Reviewed
  • [Journal Article] Combined effects of prevention and quarantine on a breakout in SIR model2011

    • Author(s)
      F. Kato, K. Tainaka, S. Sone, S. Morita, H. Iida, J. Yoshimura.
    • Journal Title

      Scientific Reports

      Volume: vol.1, No10

    • Peer Reviewed
  • [Journal Article] Life Cycle Replacement by Gene Introduction under an Allee Effectin Periodical Cicadas2011

    • Author(s)
      Y. Nariai, S. Hayashi, S. Morita, Y. Umemura, K. Tainaka, T. Sota, J. R. Cooley and J. Yoshimura
    • Journal Title

      PLoS ONE

      Volume: vol.6 Pages: 18347

    • Peer Reviewed
  • [Journal Article] The Allee effect in the selection for prime-numbered cycles in periodical cicadas2009

    • Author(s)
      Yumi Tanaka, Jin Yoshimura, Chris Simon, John R. Cooley and Kei-ichi Tainaka
    • Journal Title

      Proc. Natl. Acad. Sci.

      Volume: Vol.106 Pages: 8975-8979

    • Peer Reviewed
  • [Journal Article] Breeding games and dimorphism in male salmon2009

    • Author(s)
      Yumi Tanaka, Taro Hayashi, Donald G. Miller III, Kei-ichi Tainaka, Jin Yoshimura
    • Journal Title

      Animal Behaviour

      Volume: Vol.77 Pages: 1409-1413

    • Peer Reviewed
  • [Journal Article] Potential impacts of flooding events and stream modification onan endangered endemic plant, Schoenoplectus gemmifer(Cyperaceae)2009

    • Author(s)
      K. Kitamura, J. Yoshimura, K. Tainaka and S. Yokojima
    • Journal Title

      Ecological Research

      Volume: Vol.24 Pages: 533-546

  • [Journal Article] Selection for prime-number intervals in anumerical model of periodical cicada evolution2009

    • Author(s)
      Jin Yoshimura, Taro Hayashi1, Yumi Tanaka, Kei-ichi Tainaka and Chris Simon
    • Journal Title

      Evolution

      Volume: Vol.63 Pages: 288-294

    • Peer Reviewed
  • [Journal Article] Do spatial effects appear at low dilution rate in chemostat?2009

    • Author(s)
      Tatsuo Miyazaki, Tatsuya Togashi, Nariyuki Nakagiri, Yukio Sakisaka, Kei-ichi Tainaka and Jin Yoshimura
    • Journal Title

      Ecological Complexity

      Volume: Vol.6 Pages: 191-196

    • Peer Reviewed
  • [Presentation] Mass Suicide of Aged Mother Cells at Inflection Point in Liquid Culture of Budding Yeasts2011

    • Author(s)
      Kei-ichi Tainaka
    • Organizer
      The 5thInternational Congress on Mathematical Biology
    • Place of Presentation
      Nanjing, China
    • Year and Date
      2011-06-04
  • [Presentation] Individual-based models for mutualism2010

    • Author(s)
      Kei-ichi Tainaka
    • Organizer
      The Third China-Japan Colloquium of Mathematical Biology
    • Place of Presentation
      Beijing, China(招待講演)
    • Year and Date
      2010-10-20
  • [Remarks]

    • URL

      http://www.sys.eng.shizuoka.ac.jp/~tainaka/index.html

URL: 

Published: 2013-07-31  

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