• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to project page

2010 Fiscal Year Final Research Report

Photoswitching of RNA Function by using photoresponsive RNA

Research Project

  • PDF
Project/Area Number 20750132
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Chemistry related to living body
Research InstitutionNagoya University

Principal Investigator

LIANG Xingguo  Nagoya University, 工学研究科, 准教授 (60447828)

Project Period (FY) 2008 – 2010
KeywordsRNA / アゾベンゼン / 光制御 / 光スイッチング / リボザイム
Research Abstract

By chemically modifying RNA with azobenzene moieties, whose molecular structures change greatly with light irradiation, photoresponsive RNA is prepared. By using the photoisomerization of introduced azobenzene, formation and dissociation of RNA/RNA and RNA/DNA duplex has been photoregulated. Furthermore, multiple azobenzenes have been introduced to a ribozyme with enzymatic activity, and photoswitching of RNA cleavage at a specific site has been realized. The photoresponsive RNA is promising to be used for photoswitching RNA function.

  • Research Products

    (52 results)

All 2011 2010 2009 2008

All Journal Article (17 results) (of which Peer Reviewed: 17 results) Presentation (33 results) Book (1 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Nick Sealing by T4 DNA Ligase on a Modified DNA Template Tethering a Functional Molecule on D-Threoninol2011

    • Author(s)
      Liang, X.G.Fujioka, K.Asanuma
    • Journal Title

      H.Chem.Eur.J. (accepted)

    • Peer Reviewed
  • [Journal Article] Preparation of photoresponsive DNA tethering ortho-methylated azobenzene as a supraphotoswitch2011

    • Author(s)
      Asanuma, H. ; Nishioka, H. ; Ishikawa, T. ; Liang, X.G.
    • Journal Title

      Current Protocols in Nucleic Acid Chemistry (accepted)

    • Peer Reviewed
  • [Journal Article] Design of a Functional Nanomaterial with Recognition Ability for Constructing Light-Driven Nanodevices.2011

    • Author(s)
      Liang, X.G. ; Mochizuki, T. ; Fujii, T. ; Kashida, H. ; Asanuma, H.
    • Journal Title

      LNCS 6518

      Pages: 112-122

    • Peer Reviewed
  • [Journal Article] Unexpectedly stable artificial duplex from flexible acyclic threoninol.2010

    • Author(s)
      Asanuma, H. ; Toda, T. ; Murayama, K. ; Liang, X.G. ; Kashida, H.
    • Journal Title

      J.Am.Chem.Soc. 132

      Pages: 14702-14703

    • Peer Reviewed
  • [Journal Article] Construction of photoresponsive RNA for photoswitching RNA hybridization.2010

    • Author(s)
      Ito, H. ; Liang, X.G. ; Nishioka, H. ; Asanuma, H.
    • Journal Title

      Org.Biomol.Chem. 8

      Pages: 5519-5524

    • Peer Reviewed
  • [Journal Article] Robust and photo-controllable DNA capsules using azobenzenes.2010

    • Author(s)
      Tanaka, F. ; Mochizuki, T. ; Liang, X.G. ; Asanuma, H. ; Tanaka, S. ; Suzuki, K. ; Kitamura, S. ; Nishikawa, A. ; Ui-Tei, K. ; Hagiya, M.
    • Journal Title

      Nano Lett. 10

      Pages: 3560-3565

    • Peer Reviewed
  • [Journal Article]2010

    • Author(s)
      Hara, Y. ; Fujii, T. ; Kashida, H. ; Sekiguchi, K. ; Liang, X.G. ; Niwa, K. ; Takase, T. ; Yoshida, Y. ; Asanuma, H.
    • Journal Title

      Angew.Chem.Int.Ed. 49

      Pages: 5502-5506

    • Peer Reviewed
  • [Journal Article] Accumulation of fluorophores into DNA duplexes to mimic the properties of quantum dots.2010

    • Author(s)
      Kashida, H. ; Sekiguchi, K. ; Liang, X.G. ; Asanuma, H.
    • Journal Title

      J.Am.Chem.Soc. 132

      Pages: 6223-6230

    • Peer Reviewed
  • [Journal Article] Photoregulation of DNA transcription by using photoresponsive T7 promoters and clarification of its mechanism.2010

    • Author(s)
      Liang, X.G. ; Wakuda, R. ; Fujioka, K. ; Asanuma, H.
    • Journal Title

      FEBS J. 277

      Pages: 1551-1561

    • Peer Reviewed
  • [Journal Article] A light-driven DNA nanomachine for efficiently photoswitching RNA digestion.2010

    • Author(s)
      Zhou M.G. ; Liang, X.G. ; Mochizuki, T. ; Asanuma, H.
    • Journal Title

      Angew.Chem.Int.Ed. 49

      Pages: 2167-2170

    • Peer Reviewed
  • [Journal Article] Effect of the ortho modification of azobenzene on the photoregulatory efficiency of DNA hybridization and thermal stability of its cis-form.2010

    • Author(s)
      Nishioka H. ; Liang, X.G. ; Asanuma, H.
    • Journal Title

      Chem.Eur.J. 16

      Pages: 2054-2062

    • Peer Reviewed
  • [Journal Article] An interstrand-wedged duplex composed of alternating DNA base pairs and covalently attached intercalators.2010

    • Author(s)
      Liang, X.G. ; Nishioka H. ; Mochizuki, T. ; Asanuma, H.
    • Journal Title

      J.Mater.Chem. 20

      Pages: 575-581

    • Peer Reviewed
  • [Journal Article] In-Stem Molecular Beacon containing a Pseudo Base Pair of Threoninol Nucleotides for Removal of Background Emission.2009

    • Author(s)
      Kashida, H. ; Takatsu, T. ; Fujii, T. ; Sekiguchi, K. ; Liang, X.G. ; Niwa, K. ; Takase, T. ; Yoshida, Y. ; Asanuma, H.
    • Journal Title

      Angew.Chem.Int.Ed. 48

      Pages: 7044-7047

    • Peer Reviewed
  • [Journal Article] AA Supra-Photoswitch Involving Sandwiched DNA Base Pairs and Azobenzenes for Light-Driven Nanostructures and Nanodevices.2009

    • Author(s)
      Liang, X.G. ; Mochizuki, T. ; Asanuma, H.
    • Journal Title

      Small 5

      Pages: 1761-1768

    • Peer Reviewed
  • [Journal Article] Construction of Photon-Fueled DNA Nanomachines by Tethering Azobenzenes as Eowered by Light Irradiation.2008

    • Author(s)
      Liang, X.G. ; Nishioka, H. ;Takenaka, N. ; Asanum, H.
    • Journal Title

      ChemBioChem 9

      Pages: 702-705

    • Peer Reviewed
  • [Journal Article] Molecular Design for Reversing the Photoswitching Mode of Turning ON and OFF DNA Hybridization2008

    • Author(s)
      Liang, X.G. ; Takenaka, N. ; Nishioka, H. ; Asanuma, H.
    • Journal Title

      Chem.Asian J. 3

      Pages: 553-560

    • Peer Reviewed
  • [Journal Article] Diastereomer Separation of Azobenzene- Tethered Oligodeoxyribonucleotides and Determination of Their Absolute Configurations by Enzymatic Digestion2008

    • Author(s)
      Liang, X.G. ; Komiyama, M. ; Asanuma, H.
    • Journal Title

      Nucleosides, Nucleotides & Nucleic Acids 27

      Pages: 332-350

    • Peer Reviewed
  • [Presentation] siRNAの化学修飾によるRNAi活性の向上2011

    • Author(s)
      伊藤浩・梁興国・浅沼浩之
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(口頭)
    • Year and Date
      20110326-20110329
  • [Presentation] Molecular biology and nanotechnology of azobenzene- modified nucleic acid, G-COE symposium in Nagoya on Biochemistry and Bionanotechnology2011

    • Author(s)
      X.G.Liang
    • Organizer
      Jan.12
    • Place of Presentation
      Nagoya (Japan)(oral, invited)
    • Year and Date
      20110000
  • [Presentation] カチオン性グラフトポリマーとの併用による超高感度インステムモレキュラービーコンシステム2011

    • Author(s)
      浅沼浩之・大澤卓矢・藤井大雅・梁興国・樫田啓・吉田安子・嶋田直彦・丸山厚
    • Organizer
      日本化学会第91春季年会 講演予稿集
    • Place of Presentation
      (口頭)
    • Year and Date
      2011-03-11
  • [Presentation] DNA機能の可視光制御を目指したアゾベンゼン修飾の分子設計2011

    • Author(s)
      石川顕慎・西岡英則・沢邊恭一・梁興国・浅沼浩之
    • Organizer
      日本化学会第91春季年会 講演予稿集
    • Place of Presentation
      (口頭)
    • Year and Date
      2011-03-11
  • [Presentation] 光で操作可能なナノデバイスを構築するための光応答性粘着末端の分子設計2011

    • Author(s)
      梁興国・水谷春華・浅沼浩之
    • Organizer
      日本化学会第91春季年会 講演予稿集
    • Place of Presentation
      (口頭)
    • Year and Date
      2011-03-11
  • [Presentation] 二種類の修飾アゾベンゼンを用いた高度な光駆動型DNAナノデバイスの構築2011

    • Author(s)
      西岡英則・石川顕慎・梁興国・浅沼浩之
    • Organizer
      日本化学会第91春季年会 講演予稿集
    • Place of Presentation
      (口頭)
    • Year and Date
      2011-03-11
  • [Presentation] ストランドインベーダーへの応用を目指した人工ヌクレオチドの設計2011

    • Author(s)
      熊南和哉・梁興国・樫田啓・浅沼浩之
    • Organizer
      日本化学会第91春季年会 講演予稿集
    • Place of Presentation
      (口頭)
    • Year and Date
      2011-03-11
  • [Presentation] On-off photoswitching of DNA function with azobenzene-tetheredDNA2010

    • Author(s)
      H.Asanuma, H.Nishioka, T.Mochizuki, X.G.Liang
    • Organizer
      Pacifichem 2010
    • Place of Presentation
      Hawaii, USA(invited)
    • Year and Date
      20101215-20101220
  • [Presentation] Asanuma Nanotechnology of azobenzene- modified DNA for constructing photoresponsive nanostructures and nanodevices(oral)2010

    • Author(s)
      X.G.Liang ; T.Mochizuki ; H.Nishioka ; H.
    • Organizer
      PACIFICHEM 2010
    • Place of Presentation
      Honolulu, USA.
    • Year and Date
      20101215-20101220
  • [Presentation] Asanuma, Unexpected non-specific DNA synthesis by thermophilic DNA polymerase(oral)2010

    • Author(s)
      T.Kato ; X.G.Liang ; H.
    • Organizer
      PACIFICHEM 2010
    • Place of Presentation
      Honolulu, USA
    • Year and Date
      20101215-20101220
  • [Presentation] Asanuma, Reversible photoswitching of gene expression with azobenene-modified DNA(oral)2010

    • Author(s)
      X.G.Liang ; K.Fujioka ; R.Wakuda ; H.
    • Organizer
      PACIFICHEM 2010
    • Place of Presentation
      Honolulu, USA
    • Year and Date
      20101215-20101220
  • [Presentation] Asanuma, Photo- switching of RNA function by using azobenzene-modified RNA(oral)2010

    • Author(s)
      H.Itoh ; X.G.Liang ; H.
    • Organizer
      PACIFICHEM 2010
    • Place of Presentation
      Honolulu, USA.
    • Year and Date
      20101215-20101220
  • [Presentation] Construction of Photoresponsive Nanodevices by Using a Novel Nanomaterial Involving Multiple Azobenzenes(oral)2010

    • Author(s)
      X.G.Liang, M.G.Zhou, T.Mochizuki, H.Asanuma
    • Organizer
      The 37th International Symposium on Nucleic Acids Chemistry 2010
    • Place of Presentation
      Yokohama, Japan
    • Year and Date
      20101110-20101112
  • [Presentation] 非対称色素クラスターを利用した高感度In-Stem MolecularBeacon の開発2010

    • Author(s)
      藤井大雅・原雄一・吉田安子・梁興国・樫田啓・浅沼浩之
    • Organizer
      第59回高分子討論会
    • Place of Presentation
      北海道大学(口頭)
    • Year and Date
      20100915-20100917
  • [Presentation] 可視光によるDNA機能の可逆的な光スイッチングを目指したアゾベンゼン誘導体の分子設計2010

    • Author(s)
      西岡英則・梁興国・浅沼浩之
    • Organizer
      第59回高分子討論会
    • Place of Presentation
      北海道大学(口頭)
    • Year and Date
      20100915-20100917
  • [Presentation] 好熱性DNAポリメラーゼによる異常なDNA合成2010

    • Author(s)
      梁興国・加藤智博・浅沼浩之
    • Organizer
      第20回バイオ・高分子シンポジウム
    • Place of Presentation
      東京(口頭)
    • Year and Date
      20100728-20100729
  • [Presentation] 修飾DNAの機能向上を目指した機能性分子導入リンカーの分子設計2010

    • Author(s)
      園田峻・梁興国・浅沼浩之
    • Organizer
      日本化学会第90春季年会(1D3-29)
    • Place of Presentation
      大阪(口頭)
    • Year and Date
      20100326-20100330
  • [Presentation] オルト位メチル修飾によるシス体アゾベンゼンの熱安定性の向上およびその機構解明2010

    • Author(s)
      西岡英則・梁興国・浅沼浩之
    • Organizer
      日本化学会第90回春季年会(3G6-52)
    • Place of Presentation
      大阪
    • Year and Date
      20100326-20100329
  • [Presentation] アゾベンゼン修飾DNAエンザイムによるRNA 切断の光制御2010

    • Author(s)
      周孟光・梁興国・浅沼浩之
    • Organizer
      日本化学会第90春季年会(4D3-09)
    • Place of Presentation
      大阪(口頭)
    • Year and Date
      20100326-20100329
  • [Presentation] A challenge on specific DNA amplification at ambient temperatures.2009

    • Author(s)
      Liang, X.G. ; Suzuki, M. ; Kato, T. ; Asanuma, H.
    • Organizer
      The 3^th World Congress of Gene Track 9-1, High Sensitive Analytical Techniques of Biotherapeutics.Co-chair.Invited presentation.
    • Place of Presentation
      Foshan, China(Invited)
    • Year and Date
      20091201-20091207
  • [Presentation] アゾベンゼンの光異性化を利用した光応答性DNAzyme 10-23の開発2009

    • Author(s)
      周孟光・望月敏夫・梁興国・浅沼浩之
    • Organizer
      中部化学関係学協会支部連合協議会
    • Place of Presentation
      岐阜
    • Year and Date
      20091107-20091108
  • [Presentation] 光駆動型DNA ナノデバイスの構築とその応用2009

    • Author(s)
      梁興国・西岡英則・望月敏夫・周孟光・竹中信貴・浅沼浩之
    • Organizer
      第58回高分子討論会(3N14)
    • Place of Presentation
      熊本大学、熊本(口頭)
    • Year and Date
      20090916-20090918
  • [Presentation] ステム内部での色素会合を利用した高感度モレキュラービーコンの開発2009

    • Author(s)
      樫田啓・高津智彦・梁興国・丹羽孝介・高瀬智和・吉田安子・浅沼浩之
    • Organizer
      第58回高分子討論会(1Q-17)
    • Place of Presentation
      熊本
    • Year and Date
      20090916-20090918
  • [Presentation] アゾベンゼン導入DNAのナノテクノロジー2009

    • Author(s)
      梁興国・望月敏夫・周孟光・西岡英則・竹中信貴・浅沼浩之
    • Organizer
      第24回生体機能関連化学シンポジウム(1A-04)
    • Place of Presentation
      九州大学、福岡
    • Year and Date
      20090913-20090915
  • [Presentation] ペリレン-アントラキノン塩基対を利用した高感度In-Stem MolecularBeaconの開発2009

    • Author(s)
      樫田啓・高津智彦・関口康司・梁興国・丹羽孝介・高瀬智和・吉田安子・浅沼浩之
    • Organizer
      第24回生体機能関連化学シンポジウム(2C-02)
    • Place of Presentation
      福岡(口頭)
    • Year and Date
      20090913-20090915
  • [Presentation] De novo DNA synthesis by thermophilic DNA polymerase.2009

    • Author(s)
      Liang, X.G. ; Kato, T. ; Asanuma, H.
    • Organizer
      The 10^th International Conference on Thermophiles Research O17(pp55)
    • Place of Presentation
      Beijing, China(Invited)
    • Year and Date
      20090816-20090821
  • [Presentation] 光応答性T7プロモーターを用いた遺伝子発現の光制御-可視光照射によるGFPタンパク質生成の光スイッチング-2009

    • Author(s)
      梁興国・藤岡健太・和久田竜史・浅沼浩之
    • Organizer
      第19回バイオ・高分子シンポジウム(30)
    • Place of Presentation
      東京大学先端研、東京(口頭)
    • Year and Date
      20090730-20090731
  • [Presentation] ナノ材料化を目指した光応答性DNAの分子設計アゾベンゼンの対称導入による完全ON-OFF光制御2009

    • Author(s)
      梁興国・望月敏夫・竹中信貴・浅沼浩之
    • Organizer
      日本化学会第89春季年会(3H6 36)
    • Place of Presentation
      日本大学船橋キャンパス、千葉
    • Year and Date
      20090327-20090330
  • [Presentation] 遺伝子発現の光制御を目指したアゾベンゼン修飾siRNAの分子設計2009

    • Author(s)
      伊藤浩・西岡英則・梁興国・浅沼浩之
    • Organizer
      日本化学会第89春季年会(1J5-19)
    • Place of Presentation
      千葉
    • Year and Date
      20090327-20090330
  • [Presentation] DNAヘアピン開閉の光制御とそのRNA切断反応の光スイッチングへの応用2009

    • Author(s)
      望月敏夫・梁興国・浅沼浩之
    • Organizer
      日本化学会第89春季年会(3H6-38)
    • Place of Presentation
      千葉
    • Year and Date
      20090327-20090330
  • [Presentation] メチルチオアゾベンゼンの導入による遺伝子発現の可視光制御2009

    • Author(s)
      藤岡健太・西岡英則・藤井大雅・樫田啓・梁興国・浅沼浩之
    • Organizer
      日本化学会第89春季年会(1J5-18)
    • Place of Presentation
      千葉
    • Year and Date
      20090327-20090330
  • [Presentation] DNAハイブリダイゼーションの高効率な光制御2009

    • Author(s)
      西岡英則・梁興国・浅沼浩之
    • Organizer
      第2回物質科学フロンティアセミナー(P-7)
    • Place of Presentation
      名古屋
    • Year and Date
      20090312-20090313
  • [Presentation] Efficient Photo-Regulation of DNA Hybridization for Constructing Light-driven Nano Device2009

    • Author(s)
      H.Nishioka, X.G.Liang, Hiroyuki Asanuma
    • Organizer
      Nagoya University Global COE in Chemistry Annual Symposium(R-06)
    • Place of Presentation
      Nagoya, Japan
    • Year and Date
      2009-07-09
  • [Book] DNAのダイナミックな光制御(超分子サイエンス&テクノロジー-基礎からイノベーションまで-)(国武豊喜監修)2009

    • Author(s)
      浅沼浩之、梁興国
    • Total Pages
      941-948
    • Publisher
      エヌ・ティー・エス
  • [Patent(Industrial Property Rights)] オリゴヌクレオチドプローブ及びその利用2009

    • Inventor(s)
      浅沼浩之、梁興国、樫田啓、吉田安子、高瀬智和、丹羽孝介
    • Industrial Property Rights Holder
      独立行政法人名古屋大学、日本碍子(株)
    • Industrial Property Number
      PCT/JP2009/061980(特願2008-285966、特願2008-172526 のPCT 出願)
    • Filing Date
      2009-06-30

URL: 

Published: 2012-02-13   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi