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2009 Fiscal Year Final Research Report

Development of system identification methods for systems biology in yeast

Research Project

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Project/Area Number 20760274
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Control engineering
Research InstitutionUtsunomiya University

Principal Investigator

AZUMA Takehito  Utsunomiya University, 工学研究科, 准教授 (60308179)

Project Period (FY) 2008 – 2009
Keywordsシステムバイオロジー / システム同定 / 酵母 / 細胞分裂 / タンパク質ネットワーク
Research Abstract

Estimation problems of protein networks are defined for cell cycle in yeast and an approach to solve the problems has been proposed. In our approach, it is assumed that concentrations of proteins for cell cycle are obtained. Based on those concentrations of proteins, state space models are identified and the protein network for cell cycle is estimated. In numerical examples, the efficacy of our approach is demonstrated and the existence of unknown network paths is indicated. Moreover the roles of the estimated and unknown network paths are shown by using sensitivity analysis.

  • Research Products

    (12 results)

All 2010 2009 2008

All Journal Article (6 results) Presentation (6 results)

  • [Journal Article] An Approach to Estimationof Protein Networks for Cell Cycle Based on Least-squares Method2010

    • Author(s)
      Takehito Azuma, Masachika Kurata, Noriko Takahashi, Shuichi Adachi
    • Journal Title

      Proceedings of the 4th International Conference on Sensing Technology (採択決定)

  • [Journal Article] Estimation and Robustness Analysis of Protein Networks for 6-dimensional Cell Cycle Systems2010

    • Author(s)
      Takehito Azuma, Masachika Kurata, Noriko Takahashi, Shuichi Adachi
    • Journal Title

      Proceedings of 2010 IEEE Multi-conference on Systems and Control (採択決定)

  • [Journal Article] An Approach to Estimation of Protein Networks for Cell Cycle Based on Least-Squares Method Using Periodic Signals2010

    • Author(s)
      Noriko Takahashi, Takehito Azuma, Shuichi Adachi
    • Journal Title

      Proceedings of the 19th International Symposium on Mathematical Theory of Networks and Systems (採択決定)

  • [Journal Article] An Estimation of Protein Networks in Yeast based on Least-squares Method, roceedings of ICROS-SICE2009

    • Author(s)
      Noriko Takahashi, Takehito Azuma, Shuichi Adachi
    • Journal Title

      International Joint Conference

      Pages: 196-199

  • [Journal Article] A Design of Gain-scheduled Congestion Controllers using State2008

    • Author(s)
      Takehito Azuma, Masashi Uchida
    • Journal Title

      Predictive Observers Vol.1

      Pages: 208-219

  • [Journal Article] An Experimental Result of System Identification over Networks using Delta-Sigma Transformation2008

    • Author(s)
      Takehito Azuma, Hirohisa Kato, Shuichi Adachi
    • Journal Title

      Proceedings of the 3rd International Conference on Sensing Technology (CDROM収録)

  • [Presentation] 6次元セルサイクルシステムに対するタンパク質ネットワーク推定とロバストネス解析2010

    • Author(s)
      東剛人
    • Organizer
      計測自動制御学会第10回制御部門大会
    • Year and Date
      20100000
  • [Presentation] 周期信号に対する時変システム同定法に基づく酵母の細胞分裂ネットワークの推定2009

    • Author(s)
      高橋知子, 東剛人, 足立修一
    • Organizer
      計測自動制御学会第9回制御部門大会
    • Year and Date
      20090000
  • [Presentation] 細胞分裂におけるタンパク質ネットワーク推定とロバストネス解析2009

    • Author(s)
      東剛人
    • Organizer
      計測自動制御学会システム・情報部門学術講演会
    • Year and Date
      20090000
  • [Presentation] 酵母のセルサイクルに関するタンパク質ネットワークの推定とロバストネス解析2008

    • Author(s)
      倉田真考, 榎戸聡, 東剛人, 足立修一
    • Organizer
      計測自動制御学会第37回制御理論シンポジウム
    • Year and Date
      20080000
  • [Presentation] 結合定数と速度定数に着目したインターロックフィードバックモデルの感度解析2008

    • Author(s)
      篠崎隆宏, 東剛人
    • Organizer
      第51回自動制御連合講演会
    • Year and Date
      20080000
  • [Presentation] 熱ショック反応を応用した移動アルゴリズム2008

    • Author(s)
      輕部達也, 東剛人
    • Organizer
      第51回自動制御連合講演会
    • Year and Date
      20080000

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Published: 2011-06-18   Modified: 2016-04-21  

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