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2009 Fiscal Year Final Research Report

Development of a Sequence-specific detection probe of damaged nucleobase for noninvasive DNA damage imaging.

Research Project

  • PDF
Project/Area Number 20790010
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Chemical pharmacy
Research InstitutionOsaka University

Principal Investigator

KODAMA Tetsuya  Osaka University, 薬学研究科, 助教 (00432443)

Project Period (FY) 2008 – 2009
Keywords生体関連物質 / 人工核酸 / 分子認識 / 酸化損傷塩基 / 可視化
Research Abstract

To develop a sequence-specific detection method of damaged nucleobase for noninvasive DNA damage imaging, we successfully created a novel bridged nucleic acid monomer that can recognize 8-hydroxyguanine in double-stranded DNA in a sequence-specific manner. Additionally, several nucleic acids, which convert into an oxidative lesion 5-formyluridne in double-stranded DNA in response to photo irradiation, were also synthesized. Moreover, we designed and synthesized a triplex forming oligonucleotide probe by organizing the 8-hydroxyguanine-recognizing nucleic acid monomer and acid-labile phosphoramidite linkage, and the fluorescent labeling of the probe was achieved for its noninvasive imaging use.

  • Research Products

    (12 results)

All 2009 2008

All Journal Article (4 results) (of which Peer Reviewed: 3 results) Presentation (8 results)

  • [Journal Article] Synthesis of Light-responsive Bridged Nucleic Acid and Changes in Affinity with Complementary ssRNA.2009

    • Author(s)
      Kunihiko Morihiro, Tetsuya Kodama, Masaru Nishida, Takeshi Imanishi, Satoshi Obika
    • Journal Title

      ChemBioChem 10

      Pages: 1784-1788

    • Peer Reviewed
  • [Journal Article] Design, Synthesis, and Evaluation of a Novel Bridged Nucleic Acid, 2', 5'-BNAON, with S-type Sugar Conformation Fixed by N-O Linkage.2009

    • Author(s)
      Tetsuya Kodama, Chieko Matsuo, Hidetsugu Ori, Tetsuya Miyoshi, Satoshi Obika, Kazuyuki Miyashita, Takeshi Imanishi
    • Journal Title

      Tetrahedron 65

      Pages: 2116-2123

    • Peer Reviewed
  • [Journal Article] Synthesis of a Novel trans-3', 4'-BNA Monomer Bearing a 4, 8-Dioxa-5-azabicyclo [5. 3. 0] decane Skeleton.2009

    • Author(s)
      Tetsuya Kodama, Kensaku Sugaya, Takeshi Baba, Takeshi Imanishi, Satoshi Obika
    • Journal Title

      Heterocycles 79

      Pages: 873-882

    • Peer Reviewed
  • [Journal Article] Design and Chemical Synthesis of a 2', 4'-BNA Probe for 7, 8-Dihydro-8-oxoguanine-containing Double Stranded DNA.2008

    • Author(s)
      Tetsuya Miyoshi, Tetsuya Kodama, Satoshi Obika, Takeshi Imanishi
    • Journal Title

      Nucleic Acids Symp. Ser. 52

      Pages: 305-306

  • [Presentation] 3-オキサ-4-アザペンチレン架橋構造を有する新しいtrans-3', 4'-BNAの設計と合成2009

    • Author(s)
      兒玉哲也、菅谷建作、馬場武、今西武、小比賀聡
    • Organizer
      日本薬学会第129年会
    • Place of Presentation
      京都
    • Year and Date
      20090326-20090328
  • [Presentation] 次世代核酸系機能素材の創製を目指した高度機能化人工核酸の設計と合成2009

    • Author(s)
      兒玉哲也
    • Organizer
      第33回大学分析者の会
    • Place of Presentation
      大阪
    • Year and Date
      2009-07-29
  • [Presentation] 三重鎖形成を基盤とした迅速かつ簡便なSNP分析法2009

    • Author(s)
      伊藤浩介、戸水真治、根来佳憲、折田文子、兒玉哲也、今西武、小比賀聡
    • Organizer
      遺伝子・デリバリー研究会第9回シンポジウム
    • Place of Presentation
      大阪
    • Year and Date
      2009-07-11
  • [Presentation] 二重鎖DNA中の8-オキソグアニン塩基を選択的に認識する人工核酸プローブ2008

    • Author(s)
      兒玉哲也
    • Organizer
      第11回生命化学研究会
    • Place of Presentation
      群馬
    • Year and Date
      20081128-20081129
  • [Presentation] Design and Chemical Synthesis of a 2', 4'-BNA Probe for 7, 8-Dihydro-8-oxoguanine-containing Double Stranded DNA, Joint symposium of 18th International Roundtable on Nucleosides2008

    • Author(s)
      Tetsuya Miyoshi, Tetsuya Kodama, Satoshi Obika, Takeshi Imanishi
    • Organizer
      Nucleotides and Nucleic Acids and 35th International Symposium on Nucleic Acids Chelistry
    • Place of Presentation
      京都
    • Year and Date
      20080908-20080912
  • [Presentation] DNA配列選択的な8-ヒドロキシグアニン検出プローブの創製研究2008

    • Author(s)
      兒玉哲也、三好哲也、小比賀聡、今西武
    • Organizer
      第6回次世代を担う有機化学シンポジウム
    • Place of Presentation
      東京
    • Year and Date
      20080530-20080531
  • [Presentation] 8-OxoGの配列特異的認識能を有する三重鎖形成人工核酸の開発(1)2008

    • Author(s)
      三好哲也, 兒玉哲也, 小比賀聡, 今西武
    • Organizer
      第58回日本薬学会近畿支部大会
    • Place of Presentation
      兵庫
    • Year and Date
      2008-10-25
  • [Presentation] 8-OxoGの配列特異的認識能を有する三重鎖形成人工核酸の開発(2)2008

    • Author(s)
      兒玉哲也, 三好哲也, 小比賀聡, 今西武
    • Organizer
      第58回日本薬学会近畿支部大会
    • Place of Presentation
      兵庫
    • Year and Date
      2008-10-25

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Published: 2011-06-18   Modified: 2016-04-21  

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