• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to project page

2009 Fiscal Year Final Research Report

Structural basis for the cleavage of VWF by ADAMTS-13 under shear forces

Research Project

  • PDF
Project/Area Number 20790030
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Physical pharmacy
Research InstitutionThe University of Tokyo

Principal Investigator

NISHIDA Noritaka  The University of Tokyo, 大学院・薬学系研究科, 助教 (50456183)

Project Period (FY) 2008 – 2009
Keywords構造生物学
Research Abstract

Von Willebrand factor (VWF) mediates platelet adhesion under high shear stress. The activity of VWF is controlled by the ADAMTS13, which cuts the VWF in the force dependent manner. However, the structural basis as to how VWF exposes the cryptic site in the A2 domain for ADAMTS13 is unknown. In this study, I made a recombinant VWF A2 domain, using Pichia Pastorsis. Backbone resonance assignment of A2 domain was established for >80% signals. Based on the chemical shift change induced by low concentration of urea, the a3 and a5 helices and a4less loop, which is proximal to the scissile bond, undergoes a conformational change that would exposes the cleavage site for ADAMTS13.

  • Research Products

    (9 results)

All 2010 2009 2008

All Journal Article (8 results) Presentation (1 results)

  • [Journal Article] Shimada I "Two-state conformations in the hyarulonan-binding domain regulate CD44 adhesiveness under flow condition"2010

    • Author(s)
      Ogino S, Nishida N, Umemoto R, Suzuki M, Takeda M, Terasawa H, Kitayama J, Matsumoto M, Hayasaka H, Miyasaka M, Shimada I
    • Journal Title

      Structure 18

      Pages: 649-56

  • [Journal Article] Springer TA "Structure of an integrin with anαI domain, complement receptor type 4"2010

    • Author(s)
      Xie C, Zhu J, Chen X, Mi LZ, Nishida N, Springer TA
    • Journal Title

      EMBO J 29

      Pages: 666-79

  • [Journal Article] Shimada I "Observation of NMR signals from proteins introduced into living mammalian cells by reversible membrane permeabilization using a pore-forming toxin, Streptolysin O"2009

    • Author(s)
      Ogino S, Kubo S, Umemoto R, Huang S, Nishida N, Shimada I
    • Journal Title

      J Am Chem Soc 131

      Pages: 10834-5

  • [Journal Article] Cross-saturation and transferred cross-saturation experiments.2009

    • Author(s)
      Shimada I, Ueda T, Matsumoto M, Sakakura M, Osawa M, Takeuchi K, Nishida N, Takahashi H.
    • Journal Title

      Prog. Nuc. Magn. Reson. Spect. 54

      Pages: 123-140

  • [Journal Article] Structure of a complete integrin ectodomain in a physiologic resting state and activation and deactivation by applied forces2008

    • Author(s)
      Zhu J, Luo BH, Xiao T, Zhang C, Nishida N, Springer TA.
    • Journal Title

      Mol Cell 32

      Pages: 849-61

  • [Journal Article] Functional and structural stability of the epidermal growth factor receptor in detergent micelles and phospholipid nanodiscs2008

    • Author(s)
      Mi LZ, Grey MJ, Nishida N, Walz T, Lu C, Springer TA.
    • Journal Title

      Biochemistry 47

      Pages: 10314-23

  • [Journal Article] コラーゲン結合タンパク質を介した生命プロセスの活性化機構2008

    • Author(s)
      西田紀貴・嶋田一夫
    • Journal Title

      生化学 80

      Pages: 483-92

  • [Journal Article] 不溶性の細胞外マトリックスとの相互作用を解明する新しいNMR測定法2008

    • Author(s)
      西田紀貴・嶋田一夫
    • Journal Title

      生体の科学 59

      Pages: 358-59

  • [Presentation] Structural Mechanism for the Affinity Regulation of Cytoplasmic Dynein2009

    • Author(s)
      宝田理、西田紀貴、久保智史、吉川雅英、嶋田一夫
    • Organizer
      International Workshop Dynein 2009
    • Place of Presentation
      神戸
    • Year and Date
      20091100

URL: 

Published: 2011-06-18   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi