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2009 Fiscal Year Final Research Report

Development of sequence-specific DNA recombinase towards silencing HIV-1 proviral gene activation.

Research Project

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Project/Area Number 20790060
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Biological pharmacy
Research InstitutionTokyo Medical and Dental University

Principal Investigator

NOMURA Wataru  Tokyo Medical and Dental University, 生体材料工学研究所, 助教 (80463909)

Project Period (FY) 2008 – 2009
Keywords生化学
Research Abstract

The gene knockout by the RecZFP would be a powerful tool for creation of knockout animal models or in regenerative medicine. For the design of efficient RecZFPs, effects of linker sequences between ZFPs and catalytic domains or binding affinity of ZFPs on recombination efficiency were addressed. The results implicate that turn over of the reaction have to be optimized by DNA binding of ZFPs to design efficient recombinases. The obtained information from this study would be important for the design of RecZFPs, which are useful for sequence-specific genome editing.

  • Research Products

    (21 results)

All 2010 2009 2008

All Journal Article (9 results) Presentation (12 results)

  • [Journal Article] CD4 mimics targeting the mechanism of HIV.2010

    • Author(s)
      Yamada Y, Nomura W, Matsushita S, Tamamura H, et al.
    • Journal Title

      Bioorg. Med. Chem. Lett. 20

      Pages: 354-358

  • [Journal Article] Fluorogenically Active leucine zipper peptides as new tag-probe pairs for protein imaging in living cells.2009

    • Author(s)
      Tsutsumi H, Nomura W, Tamamura H, et al.
    • Journal Title

      Angew Chem. 48

      Pages: 9164-9166

  • [Journal Article] Structure-activity relationship study on artificial CXCR4 ligands possessing the cyclic pentapeptide scaffold: the exploration of amino acid residues of pentapeptides by substitutions of several aromatic amino acids.2009

    • Author(s)
      Tanaka T, Nomura W, Fujii N, Tamamura H, et al.
    • Journal Title

      Org. Biomol. Chem. 7

      Pages: 3805-3809

  • [Journal Article] Synthesis of protein kinase CδC1b domain by native chemical ligation methodology and characterization of its folding and ligand binding.2009

    • Author(s)
      Ohashi N, Nomura W, Tamamura H, et al.
    • Journal Title

      J. Pept. Sci. 15

      Pages: 642-646

  • [Journal Article] Fluorophore Labeling Enables Imaging and Evaluation of Specific CXCR4-Ligand Interaction at the Cell Membrane for Fluorescence-based Screening2008

    • Author(s)
      Nomura W, et al.
    • Journal Title

      Bioconjugate Chem. 19

      Pages: 1917-1920

  • [Journal Article] Structure-activity Relationship Study of CXCR4 Antagonists Bearing the Cyclic Pentapeptide Scaffold: Identification of the New Pharmacophore.2008

    • Author(s)
      Tanaka T, Nomura W, Tamamura H, et al.
    • Journal Title

      Org. Biomol. Chem. 6

      Pages: 4374-4377

  • [Journal Article] A Future Perspective on the Development of Chemokine Receptor CXCR4 Antagonists Expert Opin.2008

    • Author(s)
      Tamamura H, Nomoura W, et al.
    • Journal Title

      Drug Discov 3

      Pages: 1155-1166

  • [Journal Article] Exploratory Studies on Development of the Chemokine Receptor CXCR4 Antagonists Toward Downsizing2008

    • Author(s)
      Tamamura H, Nomura W, et al.
    • Journal Title

      Perspectives in Medicinal Chemistry 2

      Pages: 1-9

  • [Journal Article] Site-Selective Cytosine Methylation By A Split DNA Methylase2008

    • Author(s)
      Nomura W, et al.
    • Journal Title

      Peptide Science 2008 1

      Pages: 491-492

  • [Presentation] など合成抗原ペプチドによるHIV-1 gp41の三量体構造を認識する抗体の誘導2010

    • Author(s)
      野村渉, 玉村啓和
    • Organizer
      日本薬学会第130年会
    • Place of Presentation
      岡山
    • Year and Date
      20100328-20100330
  • [Presentation] などHIV-1外被タンパク質gp120の構造変化誘起を指向した低分子CD4ミミックの構造活性相関研究2010

    • Author(s)
      鳴海哲夫, 野村渉, 玉村啓和
    • Organizer
      日本薬学会第130年会
    • Place of Presentation
      岡山
    • Year and Date
      20100328-20100330
  • [Presentation] などエイズワクチンを指向した宿主受容体CXCR4由来抗原分子の創製2010

    • Author(s)
      橋本知恵, 野村渉, 鳴海哲夫, 山本直樹, 玉村啓和
    • Organizer
      日本薬学会第130年会
    • Place of Presentation
      岡山
    • Year and Date
      20100328-20100330
  • [Presentation] などペプチドライブラリーを基にしたHIV-1インテグラーゼに対する阻害剤の創製2009

    • Author(s)
      中西勇太, 野村渉, 玉村啓和
    • Organizer
      第28回メディシナルケミストリーシンポジウム
    • Place of Presentation
      東京
    • Year and Date
      20091125-20091127
  • [Presentation] Chemical biology approach utilizing novel bivalent ligands for GPCR CXCR4 leads to the elucidation of a dimeric structure.2009

    • Author(s)
      Tanaka T, Nomura W, et al.
    • Organizer
      The 3rd Asia-Pacific International Peptide Symposium
    • Place of Presentation
      Jeju Island, Korea
    • Year and Date
      20091108-20091111
  • [Presentation] などリバースからフォワードへケミカルゲノミクスを基盤とした抗HIV剤の創製2009

    • Author(s)
      田中智博, 野村渉, 玉村啓和
    • Organizer
      第46回ペプチド討論会
    • Place of Presentation
      北九州
    • Year and Date
      20091104-20091106
  • [Presentation] Development of CD4 mimic small molecules targeted for dynamic supramolecular mechanism of HIV entry2009

    • Author(s)
      Ochiai C, Nomura W, Tamamura H, et al.
    • Organizer
      第10回熊本エイズセミナー
    • Place of Presentation
      熊本
    • Year and Date
      20090928-20090929
  • [Presentation] などペプチドミメティクを基盤とした阻害剤と新規概念によるワクチン2009

    • Author(s)
      玉村啓和, 野村渉
    • Organizer
      第82回日本生化学会大会シンポジウム
    • Place of Presentation
      神戸
    • Year and Date
      2009-10-21
  • [Presentation] Site-Selective Cytosine Methylation By A Split DNA Methylase2008

    • Author(s)
      野村渉
    • Organizer
      第45回ペプチド討論会
    • Place of Presentation
      船堀タワーホール・東京
    • Year and Date
      2008-10-30
  • [Presentation] 分子進化法による配列特異的DNA組換え酵素の機能最適化2008

    • Author(s)
      野村渉
    • Organizer
      第3回バイオ関連化学合同シンポジウム
    • Place of Presentation
      東京工業大学・神奈川
    • Year and Date
      2008-09-18
  • [Presentation] Development of Site-Specific Split DNA Methylase2008

    • Author(s)
      野村渉
    • Organizer
      日本ケミカルバイオロジー研究会第3回年会
    • Place of Presentation
      学術総合センター・東京
    • Year and Date
      2008-05-20
  • [Presentation] 配列特異的DNA組換え酵素におけるDNA結合親和性が及ぼす組換え反応効率への影響2008

    • Author(s)
      野村渉
    • Organizer
      日本薬学会第129年会
    • Place of Presentation
      京都国際会館・京都
    • Year and Date
      2008-03-26

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Published: 2011-06-18   Modified: 2016-04-21  

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