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2012 Fiscal Year Final Research Report

Functionalization of microbes cultured in 2D on the newly developed optical feedback system

Research Project

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Project/Area Number 21360192
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field System engineering
Research InstitutionThe Institute of Physical and Chemical Research

Principal Investigator

OZASA Kazunari  独立行政法人理化学研究所, 前田バイオ工学研究室, 専任研究員 (10231234)

Research Collaborator SIMON Song  Hanyang University, Korea, Professor
JEESOO Lee  Hanyang University, Korea, Doctor course student
Project Period (FY) 2009 – 2012
Keywords光フィードバック / ミドリムシ / マイクロ流路 / 光走性 / 化学走性 / ニューロコンピューティング
Research Abstract

We developed a new optical feedback system for the photoreactive microbes confined in a microfluidic device. By using the photophobic reaction of Euglena, we succeeded in the control of cell density in the micro-aquarium dynamically with arbitrary pattern. We also achieved neuro-computing by introducing neural network algorithm in the feedback algorithm, by which optimized solution can be obtained with dynamic transition. Further, we succeeded in artificial connection between two individual culture system with optical feedback as well as chemical sensing using chemotaxis of the microbes.

  • Research Products

    (23 results)

All 2013 2012 2011 2010 2009 Other

All Journal Article (6 results) (of which Peer Reviewed: 6 results) Presentation (16 results) Remarks (1 results)

  • [Journal Article] Microfluidic Gas Sensing with Living Microbial Cells Confined in A Microaquarium2013

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Journal Title

      Key Eng. Mater

      Volume: 543 Pages: 431-434

    • Peer Reviewed
  • [Journal Article] Euglena-based neurocomputing with two-dimensional optical feedback on swimming cells in micro-aquariums2013

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Journal Title

      Appl.Soft Comput

      Volume: 13 Pages: 527-538

    • Peer Reviewed
  • [Journal Article] Implementation of microbe-based neurocomputing with Euglena cells confined in microaquariums2011

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Journal Title

      Int.J.Unconventional Computing

      Volume: 7 Pages: 481-499

    • Peer Reviewed
  • [Journal Article] Two-dimensional optical feedback control of Euglena confined in closed-type microfluidic channels2011

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Journal Title

      LabChip

      Volume: 11 Pages: 1933-1940

    • Peer Reviewed
  • [Journal Article] Simulation of neurocomputing based on the photophobic reactions of Euglena with optical feedback stimulation2010

    • Author(s)
      K.Ozasa, M.Aono, M.Maeda, M.Hara
    • Journal Title

      Biosystems

      Volume: 100 Pages: 101-107

    • Peer Reviewed
  • [Journal Article] Simulation of Neurocomputing Based on Photophobic Reactions of Euglena - Toward Microbe-Based Neural Network Computing -2009

    • Author(s)
      K.Ozasa, M.Aono, M.Maeda, M.Hara
    • Journal Title

      Lecture Notes in Computer Science

      Volume: 5715 Pages: 209-218

    • Peer Reviewed
  • [Presentation] Effects of chemical diffusion through PDMS microchannels to living microbial cells2013

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Organizer
      International Conference on Biomaterials Science 2013 (ICBS2013)
    • Place of Presentation
      Tsukuba, Japan
    • Year and Date
      20130319-22
  • [Presentation] Effects of Analog Feedback in Euglena-based Neural Network Computing- Experimental Research toward Network Optimization -2012

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Organizer
      Korea-Japan joint workshop on complex communication sciences
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      20121122-23
  • [Presentation] Microfluidic Gas/Liquid Toxicity Sensing Through The Chemotaxis of Euglena Cells Confined in A Micro-Aquarium2012

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Organizer
      16th International Conference on Miniaturized Systems for Chemistry and Life Sciences (microTAS2012)
    • Place of Presentation
      Okinawa, Japan
    • Year and Date
      20121028-1101
  • [Presentation] Optical Analog Feedback in Euglena-Based Neural Network Computing2012

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Maeda, M.Hara
    • Organizer
      Unconventional Computation and Natural Computation 2012 (UCNC2012)
    • Place of Presentation
      Orleans, France
    • Year and Date
      20120903-07
  • [Presentation] Chemotactic Toxicity Detection Using Euglena Cells Confined in An Isolated Micro-Aquarium2012

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Organizer
      The Sixth International Conference on Quantum, Nano and Micro Technologies (ICQNM2012)
    • Place of Presentation
      Rome,Italy
    • Year and Date
      20120819-24
  • [Presentation] Transient Characteristics in Photophobic Reactions of Euglena gracilis2012

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Organizer
      American Society for Microbiology 112th General Meeting (ASM2012)
    • Place of Presentation
      San Francisco, USA
    • Year and Date
      20120616-19
  • [Presentation] Microfluidic Gas Sensing with Living Microbial Cells Confined in A Micro-Aquarium2012

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Organizer
      International Conference on Materials and Applications for Sensors and Transducers (IC-MAST2012)
    • Place of Presentation
      Budapest, Hungary
    • Year and Date
      20120524-28
  • [Presentation] Optical feedback control/analysis of photoreactive Euglena cells swimming in micro-aquariums2011

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Organizer
      15th International Conference on Miniaturized Systems for Chemistry and Life Sciences (microTAS2011)
    • Place of Presentation
      Seatle, USA
    • Year and Date
      20111002-06
  • [Presentation] Optical feedback control of Euglena cells in closed-type microfluidic channels2011

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Organizer
      The Fifth International Conference on Quantum, Nano and Micro Technologies (ICQNM2011)
    • Place of Presentation
      Nice, France
    • Year and Date
      20110821-27
  • [Presentation] Possibility of incorporation of biomaterials in a hybrid device for two-dimensional optical feedback control2011

    • Author(s)
      K.Ozasa, M.Hara, M.Maeda
    • Organizer
      13th International Conference on Formation of Semiconductor Interfaces (ICFSI13)
    • Place of Presentation
      Prague, Czech Republic
    • Year and Date
      20110703-08
  • [Presentation] Analog feedback in Euglena-based neurocomputing2011

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Organizer
      10th International Conference on Unconventional Computation (UC2011)
    • Place of Presentation
      Turku, Finland
    • Year and Date
      20110606-10
  • [Presentation] Optical feedback control of Euglena swimming in micro-aquarium2011

    • Author(s)
      J.Lee,S.Song,K.Ozasa,M.Hara,M.Maeda
    • Organizer
      The International Symposium on Microchemistry and Microsystems 2011 (ISMM2011)
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      20110602-04
  • [Presentation] Optical feedback control of swimming Euglena in microaquariums2011

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Hara, M.Maeda
    • Organizer
      International Conference on Biomaterials Science 2011 (ICBS2011)
    • Place of Presentation
      Tsukuba, Japan
    • Year and Date
      20110315-18
  • [Presentation] Toward PostNANO technology - Optical control of photoresponsive microbes confined in microfluidic structures -2010

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Maeda, M.Hara
    • Organizer
      Asian Conference on Nanoscience and Nanotechnology 2010 (AsiaNANO2010)
    • Place of Presentation
      Tokyo, Japan
    • Year and Date
      20101101-03
  • [Presentation] Implementation of microbe-based neurocomputing with living Euglena2010

    • Author(s)
      K.Ozasa, J.Lee, S.Song, M.Maeda, M.Hara
    • Organizer
      9th International Conference on Unconventional Computation (UC10), WS-C
    • Place of Presentation
      Tokyo, Japan
    • Year and Date
      20100621-25
  • [Presentation] Simulation of Neurocomputing Based on Photophobic Reactions of Euglena - Toward Microbe-Based Neural Network Computing -2009

    • Author(s)
      K.Ozasa, M.Aono, M.Maeda, M.Hara
    • Organizer
      8th International Conference on Unconventional Computation (UC2009)
    • Place of Presentation
      Ponta Delgada, Portugal
    • Year and Date
      20090907-11
  • [Remarks]

    • URL

      http://www.k-ozasa.net/

URL: 

Published: 2014-08-29  

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