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2012 Fiscal Year Final Research Report

Studies on a novel eukaryotic assemblage containing haptophytes and cryptophytes: Possible impact on the Chromalveolata hypothesis.

Research Project

  • PDF
Project/Area Number 21370031
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biodiversity/Systematics
Research InstitutionUniversity of Tsukuba

Principal Investigator

INAGAKI Yuji  筑波大学, 生命環境系, 准教授 (50387958)

Co-Investigator(Kenkyū-buntansha) ISHIDA Ken-ichiro  筑波大学, 生命環境系, 教授 (30282198)
Project Period (FY) 2009 – 2012
Keywords真核生物系統 / 葉緑体 / クロムアルベオラータ仮説 / 遺伝子水平移動 / 2 次共生
Research Abstract

Recent studies proposed a novel monophyletic assemblage of two of major eukaryotic algal groups, haptophytes and cryptophytes, together with miscellaneous heterotrophic species. In this study, we conducted deep mRNA sequencing on heterotrophic members of the haptophyte + cryptophyte (H + C) assemblage including an enigmatic heterotrophic flagellate Palpitomonas bilix. By analyzing the mRNA sequence data, we addressed three issues described below;
(1) the diversity and detailed relationship between the phototrophic and heterotrophic members in H + C assemblage
(2) the evolution of photosynthesis and plastids in H + C assemblage, and
(3) the phylogenetic position of H + C assemblage in the tree of eukaryotes

  • Research Products

    (12 results)

All 2012 2011 2010 2009 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (8 results) Remarks (1 results)

  • [Journal Article] Separate origins of group I introns in two mitochondrial genes of the katablepharid Leucocryptos marina2012

    • Author(s)
      Yuki Nishimura, Ryoma Kamikawa, Tetsuo Hashimoto, Yuji Inagaki.
    • Journal Title

      PLoS One

      Volume: 7 Pages: e37307

    • DOI

      DOI:10.1371/journal.pone.0037307

    • Peer Reviewed
  • [Journal Article] Comprehensive SSU rRNA phylogeny of Eukaryota.2010

    • Author(s)
      Ken-Ichiro Ishida, Yuji Inagaki
    • Journal Title

      Journal of Endocytobiosis and Cell Research

      Volume: 20 Pages: 81-88

    • Peer Reviewed
  • [Journal Article] Palpitomonas bilix gen. et sp. nov.: A novel deep-branching heterotroph possibly related to Archaeplastida or Hacrobia.2010

    • Author(s)
      Akinori Yabuki, Yuji Inagaki, Ken-Ichiro Ishida.
    • Journal Title

      Protist

      Volume: 210 Pages: 523-538

    • Peer Reviewed
  • [Presentation] 新奇真核微生物がもたらす新しい真核生物大系統像2012

    • Author(s)
      神川龍馬、矢吹彬憲、橋本哲男、西村祐貴、稲垣祐司
    • Organizer
      第28回日本微生物生態学会
    • Place of Presentation
      豊橋技術科学大学
    • Year and Date
      20121019-22
  • [Presentation] The phylogenetic position of the katablepharid Leucocryptos marinabased on seven mitochondrial gene sequences2011

    • Author(s)
      西村祐貴、神川龍馬、稲垣祐司、橋本哲男
    • Organizer
      SMBE2011
    • Place of Presentation
      京都大学
    • Year and Date
      20110726-30
  • [Presentation] 159 遺伝子データに基づく従属栄養性真核微生物 Palpitomonas bilix の系統的位置2011

    • Author(s)
      矢吹彬憲、神川龍馬、Martin Kolisko、石田健一郎、田辺晶史、橋本哲男、稲垣祐司
    • Organizer
      第5回日本進化原生生物学研究会
    • Place of Presentation
      富山大学(富山,富山
    • Year and Date
      20110711-22
  • [Presentation] 新奇真核微生物からの大規模配列データで変貌し続ける、我々の真核生物大系統像2011

    • Author(s)
      稲垣祐司、矢吹彬憲、神川龍馬
    • Organizer
      第31回微生物系統分類研究会
    • Place of Presentation
      理化学研究所(和光)
    • Year and Date
      2011-11-25
  • [Presentation] Recent progress in placing newly-discovered lineages of protists in the deep tree of eukaryotes2011

    • Author(s)
      稲垣祐司
    • Organizer
      he meeting of the Center for Comparative Genomics and Evolutionary Bioinformatics
    • Place of Presentation
      Dalhousie 大学(ハリフマックス,カナダ)
    • Year and Date
      2011-08-06
  • [Presentation] 無色系統群の研究から炙り出される真核藻類の進化-ゲノミクスの視点を含めて2011

    • Author(s)
      稲垣祐司、矢吹彬憲、神川龍馬、西村祐貴、石田健一郎、橋本哲男
    • Organizer
      NBRP「藻類」シンポジウム『未来を支える藻類,その多様性-ゲノミクス・ポストゲノミクスの視点から』
    • Place of Presentation
      新宿住友ビルスカイルーム
    • Year and Date
      2011-01-29
  • [Presentation] 127 遺伝子データ解析によるテロネマ類と有中心粒太陽虫の系統的位置2009

    • Author(s)
      稲垣祐司,他 12 名
    • Organizer
      第4回日本進化原生生物研究会
    • Place of Presentation
      宮城教育大学
    • Year and Date
      20090704-05
  • [Presentation] The possible link among two enigmatic heterotrophic eukaryotic lineages, telonemids, centrohelids and "chromalveolate" groups2009

    • Author(s)
      稲垣祐司
    • Organizer
      つくば藻類・プロティスト研究フォーラム
    • Place of Presentation
      筑波大学
    • Year and Date
      2009-04-20
  • [Remarks]

    • URL

      https://sites.google.com/site/yujiswebsite/Home

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Published: 2014-08-29  

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