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2011 Fiscal Year Final Research Report

Transcriptional analysis of silica-induced protein in Thermus thermophilus and its application to heterologous protein production

Research Project

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Project/Area Number 21580097
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied microbiology
Research InstitutionKyushu University

Principal Investigator

DOI Katsumi  九州大学, 農学研究院, 講師 (40253520)

Co-Investigator(Kenkyū-buntansha) TASHIRO Kosuke  九州大学, 大学院・農学研究院, 准教授 (00192170)
FUJINO Yasuhiro  九州大学, 基幹教育院, 助教 (70582659)
Project Period (FY) 2009 – 2011
KeywordsThermus thermophilus / シリカ / ABCトランスポーター / DNAマイクロアレイ / 大量発現系 / 鉄イオン
Research Abstract

Thermus cells produce the specific protein, a silica-induced protein(Sip), only when they are cultivated in the culture containing supersaturated silica. DNA microarray analysis under the silica-stressed and iron-deficient conditions were performed to detect the signal transduction in sip expression. From the results, Thermus cells may receive the signal of the existence of supersaturated silica as the iron deficiency, and may gather iron ions or other metal cations to their surfaces.

  • Research Products

    (31 results)

All 2012 2011 2010 2009 Other

All Journal Article (17 results) (of which Peer Reviewed: 14 results) Presentation (11 results) Book (2 results) Remarks (1 results)

  • [Journal Article] Expression analysis of the spi gene in the pock-forming plasmid pSA1. 1 from Streptomyces azureus and localization of its product during differentiation2012

    • Author(s)
      K. Doi, Y. Ohyama, E. Yokoyama, T. Nishiyama, Y. Fujino, Y. Nagayoshi, T. Ohshima and S. Ogata
    • Journal Title

      Appl. Microbiol. Biotechnol

      Volume: (in press)

    • Peer Reviewed
  • [Journal Article] Effect of microorganisms on flocculation of quartz2012

    • Author(s)
      T. Hirajima, Y. Aiba, M. Farahat, N. Okibe, K. Sasaki, T. Tsuruta and K. Doi
    • Journal Title

      Int. J. Miner. Process

      Pages: 102. 103, 102-103, 107-111

    • Peer Reviewed
  • [Journal Article] Silica deposition induced by isolated aluminum ions bound on chelate resin as a model compound of the surface of microbes2012

    • Author(s)
      S. Bai, G. Naren, H. Noma, M. Etou, H. Ohashi, Y. Fujino, K. Doi, Y. Okaue, T. Yokoyama
    • Journal Title

      Colloid Surfaces B

      Volume: 95 Pages: 208-213

    • Peer Reviewed
  • [Journal Article] 環境応答とバイオミネラリゼーション-極限環境下における細菌の生存戦略2012

    • Author(s)
      藤野泰寛、横山拓史、土居克実
    • Journal Title

      生物と化学

      Volume: 50 Pages: 175-181

  • [Journal Article] Creation of a thermostable NADP(+)-dependent D :-amino acid dehydrogenase from Ureibacillus thermosphaericus strain A1 meso-diaminopimelate dehydrogenase by site-directed mutagenesis2011

    • Author(s)
      H. Akita, K. Doi, Y. Kawarabayasi and T. Ohshima
    • Journal Title

      Biotechnol. Lett

      Volume: (in press)

    • Peer Reviewed
  • [Journal Article] Amino acid components of lees in salmon fish sauce are tyrosine and phenylalanine2011

    • Author(s)
      T. Ohmori, Y. Mutaguchi, S. Yoshikawa, K. Doi and T. Ohshima
    • Journal Title

      J. Biosci. Bioeng

      Volume: 112 Pages: 256-258

    • Peer Reviewed
  • [Journal Article] Highly stable meso-diaminopimelate dehydrogenase from an Ureibacillus thermosphaericus strain A1 isolated from a Japanese compost : purification2011

    • Author(s)
      H. Akita, Y. Fujino, K. Doi and T. Ohshima
    • Journal Title

      characterization and sequencing

      Volume: 1 Pages: 43

    • Peer Reviewed
  • [Journal Article] Characterization of a novel dye-linked L-proline dehydrogenase from an aerobic hyperthermophilic archaeon2010

    • Author(s)
      T. Satomura, X. D. Zhang, Y. Hara, K. Doi, H. Sakuraba and T. Ohshima
    • Journal Title

      Pyrobaculum calidifontis

      Volume: 89 Pages: 1075-1082

    • Peer Reviewed
  • [Journal Article] Visible wavelength spectrophotometric assays of L-aspartate and D-aspartate using2010

    • Author(s)
      V
    • Journal Title

      hyperthermophilic enzyme systems

      Volume: 409 Pages: 1-6

    • Peer Reviewed
  • [Journal Article] Silica deposition and phenotypic changes to Thermus thermophilus cultivated in the presence of supersaturated silica2010

    • Author(s)
      S. Iwai, K. Doi, Y. Fujino, T. Nakazono, K. Fukuda, Y. Motomura and S. Ogata
    • Journal Title

      The ISME J.

      Volume: 4 Pages: 809-816

    • Peer Reviewed
  • [Journal Article] Characterization of a silica-induced protein in Thermus thermophilus related to biosilicification2010

    • Author(s)
      K. Doi, Y. Fujino, T. Ohshima and T. Yokoyama
    • Journal Title

      Geochim. Cosmochim. Ac.

      Volume: 74 Pages: A238

    • Peer Reviewed
  • [Journal Article] Transcriptional analysis of the response to supersaturated silicic acid in Thermus thermophilus2010

    • Author(s)
      Y. Fujino, T. Ohshima, T. Yokoyama and K. Doi
    • Journal Title

      Geochim. Cosmochim. Ac.

      Volume: 74 Pages: A309

    • Peer Reviewed
  • [Journal Article] Stimulation of expression of a silica-induced protein(Sip) in Thermus thermophilus by supersaturated silicic acid2009

    • Author(s)
      K. Doi, Y. Fujino, F. Inagaki, R. Kawatsu, M. Tahara, T. Ohshima, Y. Okaue, T. Yokoyama, S. Iwai, S. Ogata
    • Journal Title

      Appl. Environ. Microbiol

      Volume: 75 Pages: 2406-2413

    • Peer Reviewed
  • [Journal Article] Adhesion of Escherichia coli onto quartz, hematite and corundum : Extended DLVO theory and flotation behavior2009

    • Author(s)
      M. Farahat, T. Hirajima, K. Sasaki, K. Doi
    • Journal Title

      Colloids Surface B

      Volume: 74 Pages: 140-149

    • Peer Reviewed
  • [Journal Article] Pediococcus lolii sp. nov., isolated from ryegrass silage2009

    • Author(s)
      K. Doi, Y. Nishizaki, Y. Fujino, T. Ohshima, S. Ohmomo and S. Ogata
    • Journal Title

      Int. J. Syst. Evol.Microbiol

      Volume: 59 Pages: 1007-1010

    • Peer Reviewed
  • [Journal Article] 九州地方の遺伝子資源の有効活用に向けた基礎研究

    • Author(s)
      土居克実
    • Journal Title

      BIO九州

      Volume: 191 Pages: 11-19

  • [Journal Article] 高度好熱性細菌のシリカ鉱物化作用の解明と応用に関する研究

    • Author(s)
      岩井覚、緒方靖哉、土居克実
    • Journal Title

      九州

      Volume: 193 Pages: 3-6

  • [Presentation] Role of biosilicification-related protein in Thermus thermophilus and its application to nanotechnology2011

    • Author(s)
      K. Doi, Y. Fujino, T. Yokoyama and T. Ohshima
    • Organizer
      11^<th> International Symposium on Metal Ions in Biology and Medicine
    • Year and Date
      20110000
  • [Presentation] Biodeposition of silica in geothermal system : Transcriptional analysis of silica-induced protein2011

    • Author(s)
      Y. Fujino, T. i Yokoyama, T. Ohshima and K. Doi
    • Organizer
      11^<th> International Symposium on Metal Ions in Biology and Medicine
    • Year and Date
      20110000
  • [Presentation] Identification and characterization of lactic acid bacteria from fermented rice bran product2010

    • Author(s)
      ONG Thi Anh Phuong、藤野泰寛、大島敏久、土居克実
    • Organizer
      第47回化学関連支部合同九州大会
    • Year and Date
      20100000
  • [Presentation] Transcriptional Analysis of the Response to Supersaturated Silicic Acid in Thermus Thermophilus2010

    • Author(s)
      Fujino Y, Ohshima T, Yokoyma T and Doi K
    • Organizer
      Goldschmidt 2010
    • Year and Date
      20100000
  • [Presentation] Characterization of a Silica-induced protein in Thermus Thermophilus related to Biosilicification2010

    • Author(s)
      Doi K., Fujino Y., Ohshima T. and Yokoyama T
    • Organizer
      Goldschmidt 2010
    • Year and Date
      20100000
  • [Presentation] シリカストレスに対するThermus thermophilus HB8の応答2009

    • Author(s)
      藤野泰寛、岩井覚、緒方靖哉、大島敏久、土居克実
    • Organizer
      日本農芸化学会関西・中四国・西日本支部.日本栄養・食糧学会九州・沖縄支部.日本食品科学工学会西日本支部.合同大会
    • Year and Date
      20090000
  • [Presentation] Thermus thermophilus HB8のシリカ誘導性タンパク質の発現機構解析2009

    • Author(s)
      藤野泰寛、大島敏久、緒方靖哉、土居克実
    • Organizer
      日本生物工学会2009年度大会
    • Year and Date
      20090000
  • [Presentation] 乳酸菌由来のアミノ酸ラセマーゼの機能解析

    • Author(s)
      行本丞太郎、松川博昭、土居克実、大島敏久
    • Organizer
      日本農芸化学会2012年度大会
  • [Presentation] 臨海域の熱水中における微生物メタゲノム解析

    • Author(s)
      土居克実、岩瀬真、熊谷健太、藤野泰寛、草場俊司、土谷直史、森一樹、田代康介、久原哲
    • Organizer
      日本ゲノム微生物学会2011年度大会
  • [Presentation] Role of biosilicification-related protein in Thermus thermophilus and its application to nanotechnology

    • Author(s)
      K. Doi and T. Ohshima
    • Organizer
      16^<th> Japanese-German Workshop on Enzyme Technology
  • [Presentation] Thermus thermophilusによるバイオミネラリゼーション形成機序のトランスクリプトーム解析

    • Author(s)
      岩瀬真、藤野泰寛、田代康介、大島敏久、土居克実
    • Organizer
      第48回化学関連支部合同九州大会
  • [Book] 乳酸菌とビフィズス菌のサイエンス2010

    • Author(s)
      土居克実、門多真理子、左古知行、桜井稔三、緒方靖哉他
    • Total Pages
      431-446
    • Publisher
      京大出版会
  • [Book] メタルバイオテクノロジーによる環境保全と資源回収2009

    • Author(s)
      土居克実他
    • Total Pages
      115-120
    • Publisher
      シーエムシー出版
  • [Remarks]

    • URL

      http://www.grt.kyushu-u.ac.jp/grt-docs/migt/HP/

URL: 

Published: 2013-07-31  

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