2012 Fiscal Year Final Research Report
Global extractionand analysis of protein tertiary structure patterns
| Project/Area Number |
21700323
|
|---|
| Research Category |
Grant-in-Aid for Young Scientists (B)
|
| Allocation Type | Single-year Grants |
|---|
| Research Field |
Bioinformatics/Life informatics
|
|---|
| Research Institution | Kyoto University |
|---|
Principal Investigator |
|
|---|
| Project Period (FY) |
2009 – 2012
|
| Keywords | バイオインフォマティクス |
|---|
| Research Abstract |
We developed a graph compression method that does not depend on implementation, and proposed a similarity measure between graphs. We regarded a distance matrix between Cαatoms of a protein as an image, and proposed a grammar-based image compression method. In addition, we proposed a grammar-based tree compression method. Furthermore, we developed prediction methods using protein domains for protein-protein interactions and protein complexes
|
