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2011 Fiscal Year Final Research Report

GenomeevoIutioncausedbygenedupIication

Research Project

  • PDF
Project/Area Number 21770003
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Genetics/Genome dynamics
Research InstitutionKyushu University (2010-2011)
The Graduate University for Advanced Studies (2009)

Principal Investigator

TESHIMA Kosuke  九州大学, 理学研究院, 学術研究員 (20447593)

Project Period (FY) 2009 – 2011
Keywordsゲノム進化 / 自然選択 / 遺伝子変換 / 遺伝子重複 / 集団遺伝学
Research Abstract

Gene duplication is one of the most important factors that contribute to genome evolution. Researches on gene duplication and neofunctionalization will improve our understanding of biological evolution. In this project, I conducted theoretical population genetics research and genome data analysis to understand the evolutionary mechanism of gene duplication. Extensive simulation study revealed the detailed pattern of nucleotide diversity within and flanking regions of gene duplication. One of the unexpected results obtained from this project is that the signature of natural selection is more likely to be preserved in the flanking region rather than within duplicates. Simulation programs developed in this project and the results of this project will contribute to further genome data analysis.

  • Research Products

    (7 results)

All 2012 2010 2009 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (3 results) Remarks (1 results)

  • [Journal Article] Innan, The coalescent with selection on copy number variants2012

    • Author(s)
      Teshima KM and H.
    • Journal Title

      Genetics

      Volume: vol.190 Pages: 1077-1086

    • Peer Reviewed
  • [Journal Article] modifying Hudson' s ins software to generate samples of D NA sequences with a biallelic site under selection2009

    • Author(s)
      Teshima KM, mbs
    • Journal Title

      BMC Bioinformatics

      Pages: 166

    • Peer Reviewed
  • [Journal Article] Variations in Hd1 proteins, Hd3a promoters, and Ehdl expression levels contribute to diversity of flowering time in cultivated rice. Proc2009

    • Author(s)
      Takahashi Y, Teshima KM, Yokoi S, Innan H, Shimamoto K
    • Journal Title

      Natl. Acad. Sci. USA

      Volume: vol.106 Pages: 4555-4560

    • Peer Reviewed
  • [Presentation] 重複遺伝子とその周辺領域の遺伝的変異に関する研究2010

    • Author(s)
      手島康介
    • Organizer
      日本遺伝学会第82回大会
    • Place of Presentation
      北海道大学
    • Year and Date
      2010-09-22
  • [Presentation] 遺伝子重複の進化における遺伝子変換の影響2010

    • Author(s)
      手島康介
    • Organizer
      日本進化学会第12回大会
    • Place of Presentation
      東京工業大学
    • Year and Date
      2010-08-04
  • [Presentation] 自然選択の影響をうけたDNA配列を生成するCoalescentシミュレーションプログラムの開発2009

    • Author(s)
      手島康介
    • Organizer
      日本遺伝学会第81回大会
    • Place of Presentation
      信州大学
    • Year and Date
      2009-09-18
  • [Remarks]

    • URL

      http://www.sendou.sokenn.ac.jp/esb/innan/InnanLab/

URL: 

Published: 2013-07-31  

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