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2010 Fiscal Year Final Research Report

Evaluation of microbial community responses to mixed contaminant perturbation by using a functional genomics approach.

Research Project

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Project/Area Number 21810021
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Environmental impact assessment/Environmental policy
Research InstitutionEhime University

Principal Investigator

HAMAMURA Natsuko  Ehime University, 沿岸環境科学研究センター・グローバルCOE, 准教授 (50554466)

Project Period (FY) 2009 – 2010
Keywordsメタトランスクリプトーム / ヒ素 / 微生物生態
Research Abstract

The aim of this study was to evaluate the overall effect of perturbation by mixed contaminants on microbial community in situ by detecting community-level gene expression responses using metatranscriptomic approach. The analysis of arsenic- and heavy metal-contaminated environmental samples revealed the specific expression of functional genes involved in metal resistance, which could potentially be targeted to assess toxic effect of pollutants in the environments.

  • Research Products

    (9 results)

All 2011 2010 2009 Other

All Journal Article (2 results) (of which Peer Reviewed: 1 results) Presentation (6 results) Remarks (1 results)

  • [Journal Article] Distribution of aerobic arsenite oxidase genes within the Aquificales.2011

    • Author(s)
      Hamamura, N, R.E.Macur, Y.Liu, W.P.Inskeep, A-L.Reysenbach
    • Journal Title

      Interdisciplinary studies on Environmental Chemistry Vol.3

      Pages: 47-55

  • [Journal Article] Metagenomes from high-temperature chemotrophic systems reveal importance of geochemical controls on microbial community structure and function.2010

    • Author(s)
      Inskeep, W.P., D.B.Rusch, Z.Jay, M.J.Herrgard, M.A.Kozubal, T.H.Richardson, R.E.Macur, N.Hamamura, 他11名
    • Journal Title

      PLOS One Vol.5, No.3

      Pages: e9773

    • Peer Reviewed
  • [Presentation] 環境中ヒ素動態に影響を及ぼす微生物群集機能の解析2011

    • Author(s)
      濱村奈津子
    • Organizer
      トピア科学シンポジウム「バイオレメディエーション微生物群の解析からデザイン化まで」講演要旨集,5.招待講演
    • Place of Presentation
      名古屋市
    • Year and Date
      2011-01-28
  • [Presentation] Comparative meta-transcriptomic analysis of Aquificales-dominant terrestrial hot springs.2011

    • Author(s)
      Hamamura N., Meneghin, J., Reysenbach, A-L.
    • Organizer
      TBI/INL/RCN- Metagenomic Analysis Workshop(講演要旨集5.)(ポスター発表)
    • Place of Presentation
      Jackson Hole, Wyoming, U.S.A.
    • Year and Date
      2011-01-14
  • [Presentation] Diversity and functional analysis of bacterial communities associated with soda lake in Khovsgol.2010

    • Author(s)
      Hamamura N., Itai, T., Liu, Y., Inskeep, W.P., Reysenbach, A-L.
    • Organizer
      日本微生物生態学会第26回大会,講演要旨集,127.ポスター発表
    • Place of Presentation
      つくば市
    • Year and Date
      2010-11-25
  • [Presentation] Comparative meta-transcriptomic analysis of Aquificales-dominant terrestrial hot springs.2010

    • Author(s)
      Hamamura N., Meneghin, J., Reysenbach, A-L.
    • Organizer
      The 13th International Symposium in Microbial Ecology, Abstracts, CT35.002.口頭発表
    • Place of Presentation
      Seattle, Washington, USA
    • Year and Date
      2010-08-26
  • [Presentation] Comparative community gene expression analysis of Aquificales-dominant geothermal springs.2010

    • Author(s)
      Hamamura N., Meneghin, J., Reysenbach, A-L.
    • Organizer
      第4回日本ゲノム微生物大会,講演要旨集,31.口頭発表
    • Place of Presentation
      福岡市
    • Year and Date
      2010-03-08
  • [Presentation] Comparative metatranscriptomics of Aquificales-dominant hot springs.2009

    • Author(s)
      Hamamura N., Meneghin, J., Reysenbach, A-L.
    • Organizer
      日本微生物生態学会第25回大会,講演要旨集,24.口頭発表
    • Place of Presentation
      広島市
    • Year and Date
      2009-11-21
  • [Remarks] アウトリーチ活動:微生物生態学会平成22年度大会の一環として催した一般向け公開講座(微生物観察教室)の実行委員として企画運営を行った。(2010年11月23日開催)

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Published: 2012-01-26   Modified: 2016-04-21  

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