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2021 Fiscal Year Research-status Report

Preparation and characterization of carbon nanomaterials prepared by thermal treatment of biomass DNA

Research Project

Project/Area Number 21K12306
Research InstitutionNagoya University

Principal Investigator

ジンチェンコ アナトーリ  名古屋大学, 環境学研究科, 准教授 (00432352)

Project Period (FY) 2021-04-01 – 2024-03-31
KeywordsDNA / biomass / carbon nanomaterials / fluorescent nanomaterial / biodots / metal ion sensing / mercury ion sensing
Outline of Annual Research Achievements

Fluorescent nanoparticles (biodots) of several nm in size were synthesized from polymeric and monomeric nucleic acids by hydrothermal (HT) treatment. Formation of biodots proceeds by degradation of ribose sugar, whereas depurination,
depyrimidation and consequent condensation and polymerization of nucleobases result in the formation of fluorescent nanoparticles. HT treatment of nucleic acids containing purine nucleobases yielded biodots that are over 50 times brighter compared to the biodots prepared from precursors containing pyrimidine nucleobases. The brightest biodots prepared from AMP nucleotide had the highest quantum yield of ca. 30%.
Microwave reaction can be also used to prepare fluorescent products from DNA and nucleotides, yet their fluorescent properties were inferior compared to HT reaction products.
Biodots had high affinity to Hg2+, Ag+ and Cu2+, which was utilized for the sensing of these heavy metal ions. Biodots prepared from individual nucleotides showed better selectivity to Hg2+ ions and a linear dependence on Hg2+ concentration in a broad concentration range. In addition, biodots could be used to make paper-based sensor strips for detecting metal ions in aqueous solutions that can be used for developing simple metal ion indicators for analytical and environmental applications.

Current Status of Research Progress
Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

The research has been fully implemented according to the original research plan for 2021 FY. The study on hydrothermal treatment and microwave-assisted processing of DNA and nucleic acids was completed, structure of HT products was clarified and application of such products for analytical detection of heavy metal ions had been demonstrated.

Strategy for Future Research Activity

In the the second year of the proposed research, the main focus will be given to pyrolytic treatment of DNA and DNA-containing materials to prepare carbon nanomaterilas. Initial synthetic pathways to investigate are pyrolysis and combustion. A variety of processing conditions will be examined, including atmospheric composition, processing temperature and time to obtain graphitic carbon or a similar product. DNA-derived products will be characterized to determine chemical composition (FTIR, elemental analysis), functional groups (NMR) nanostructure (XRD, Raman), morphology (TEM, SEM), electronic (UV/Vis diffuse reflectance), and fluorescence properties (fluorescence spectroscopy and microscopy). The products of DNA materials' pyrolytic treatment will be compared to carbon nanomaterials obtained from more common cellulosic precursors.
The application of DNA-derived biochar will be studied for adsorption and separation of various pollutants relevant to environmental systems. Standard batch adsorption experiments will be performed for metal ions (Hg2+, Cd2+, Pb2+, etc.) and organic contaminants (pharmaceuticals such as ibuprofen, diclofenac, etc.) and compared with the adsorption property of the original DNA materials. Kinetic analysis of adsorption isotherm studies will be performed to make comparison with activated carbon and other commonly used adsorbents.

Causes of Carryover

The remained amount from 2021 FY is only 363 yen which is insignificant to be concerned. It will be added to 2022 FY budget to purchase consumables.

  • Research Products

    (7 results)

All 2021 Other

All Journal Article (4 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 4 results,  Open Access: 3 results) Presentation (2 results) (of which Int'l Joint Research: 2 results) Remarks (1 results)

  • [Journal Article] DNA-Chitosan Aerogels and Regenerated Hydrogels with Extraordinary Mechanical Properties2021

    • Author(s)
      Postnova Irina、Sarin Sergey、Zinchenko Anatoly、Shchipunov Yury
    • Journal Title

      ACS Applied Polymer Materials

      Volume: 4 Pages: 663~671

    • DOI

      10.1021/acsapm.1c01585

    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Metal Ions Sensing by Biodots Prepared from DNA, RNA, and Nucleotides2021

    • Author(s)
      Wang Maofei、Tsukamoto Masaki、Sergeyev Vladimir G.、Zinchenko Anatoly
    • Journal Title

      Biosensors

      Volume: 11 Pages: 333~333

    • DOI

      10.3390/bios11090333

    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Fluorescent Nanoparticles Synthesized from DNA, RNA, and Nucleotides2021

    • Author(s)
      Wang Maofei、Tsukamoto Masaki、Sergeyev Vladimir G.、Zinchenko Anatoly
    • Journal Title

      Nanomaterials

      Volume: 11 Pages: 2265~2265

    • DOI

      10.3390/nano11092265

    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Adsorptive Removal of Heavy Metal Ions, Organic Dyes, and Pharmaceuticals by DNA-Chitosan Hydrogels2021

    • Author(s)
      Chan Kayee、Morikawa Kohki、Shibata Nobuyuki、Zinchenko Anatoly
    • Journal Title

      Gels

      Volume: 7 Pages: 112~112

    • DOI

      10.3390/gels7030112

    • Peer Reviewed / Open Access
  • [Presentation] Assembly, fluorescent properties, and metal ion sensing characteristics of biodots synthesized from DNA, RNA, and nucleotides2021

    • Author(s)
      Wang Maofei、Zinchenko Anatoly
    • Organizer
      Pacifichem 2021
    • Int'l Joint Research
  • [Presentation] Zinchenko Anatoly、Chan Kayee、Morikawa Kohki、Shchipunov Yury2021

    • Author(s)
      DNA-Chitosan Hydrogels: formation, properties, and environmental applications
    • Organizer
      7th Congress of Federation of Asian Polymer Societies
    • Int'l Joint Research
  • [Remarks] Sustainable Materials Lab (Zinchenko Lab)

    • URL

      https://www.urban.env.nagoya-u.ac.jp/suschem/research.html

URL: 

Published: 2022-12-28  

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